RNA–Protein interactions for RNA: ENST00000493795.5

BRCA1-221, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-221ENST00000493795 NPIPB6E9PJ23 425 aa7.03□□□□□ -1.28
BRCA1-221ENST00000493795 RER1O15258 196 aa7.03□□□□□ -1.28
BRCA1-221ENST00000493795 SRSF10O75494 262 aaKnown RBP7.03□□□□□ -1.28
BRCA1-221ENST00000493795 HPXP02790 462 aa7.03□□□□□ -1.28
BRCA1-221ENST00000493795 DSCR4P56555 118 aaPredicted RBP7.03□□□□□ -1.28
BRCA1-221ENST00000493795 HERPUD1Q15011 391 aa7.03□□□□□ -1.28
BRCA1-221ENST00000493795 PRSS54Q6PEW0 395 aa7.03□□□□□ -1.28
BRCA1-221ENST00000493795 RNF165Q6ZSG1 346 aa7.03□□□□□ -1.28
BRCA1-221ENST00000493795 CALHM1Q8IU99 346 aa7.03□□□□□ -1.28
BRCA1-221ENST00000493795 OR4P4Q8NGL7 312 aa7.03□□□□□ -1.28
BRCA1-221ENST00000493795 Q8WTZ3 238 aa7.03□□□□□ -1.28
BRCA1-221ENST00000493795 DPH3Q96FX2 82 aa7.03□□□□□ -1.28
BRCA1-221ENST00000493795 C20orf27Q9GZN8 174 aa7.03□□□□□ -1.28
BRCA1-221ENST00000493795 CRISPLD2Q9H0B8 497 aa7.03□□□□□ -1.28
BRCA1-221ENST00000493795 CNTD2Q9H8S5 307 aa7.03□□□□□ -1.28
BRCA1-221ENST00000493795 SIRT7Q9NRC8 400 aa7.03□□□□□ -1.28
BRCA1-221ENST00000493795 WSB2Q9NYS7 404 aaPredicted RBP7.03□□□□□ -1.28
BRCA1-221ENST00000493795 DIRC3C9JPN6 131 aa7.03□□□□□ -1.28
BRCA1-221ENST00000493795 F2RL2O00254 374 aa7.03□□□□□ -1.28
BRCA1-221ENST00000493795 CD74P04233 296 aa7.03□□□□□ -1.28
BRCA1-221ENST00000493795 PGA4P0DJD7 388 aa7.03□□□□□ -1.28
BRCA1-221ENST00000493795 PGA5P0DJD9 388 aa7.03□□□□□ -1.28
BRCA1-221ENST00000493795 EMDP50402 254 aa7.03□□□□□ -1.28
BRCA1-221ENST00000493795 BTG2P78543 158 aa7.03□□□□□ -1.28
BRCA1-221ENST00000493795 RAB32Q13637 225 aa7.03□□□□□ -1.28
BRCA1-221ENST00000493795 CEACAM16Q2WEN9 425 aa7.03□□□□□ -1.28
BRCA1-221ENST00000493795 VN1R17PQ8TDU5 208 aa7.03□□□□□ -1.28
BRCA1-221ENST00000493795 SNX22Q96L94 193 aa7.03□□□□□ -1.28
BRCA1-221ENST00000493795 CES1P1Q9UKY3 287 aa7.03□□□□□ -1.28
BRCA1-221ENST00000493795 FUT9Q9Y231 359 aa7.03□□□□□ -1.28
BRCA1-221ENST00000493795 LOXL2Q9Y4K0 774 aa7.03□□□□□ -1.28
BRCA1-221ENST00000493795 C9orf170A2RU37 121 aa7.03□□□□□ -1.28
BRCA1-221ENST00000493795 FGF17O60258 216 aa7.03□□□□□ -1.28
BRCA1-221ENST00000493795 DHRS3O75911 302 aa7.03□□□□□ -1.28
BRCA1-221ENST00000493795 HIST1H1DP16402 221 aaKnown RBP7.03□□□□□ -1.28
BRCA1-221ENST00000493795 AWAT1Q58HT5 328 aa7.03□□□□□ -1.28
BRCA1-221ENST00000493795 Q7L0L9 218 aa7.03□□□□□ -1.28
BRCA1-221ENST00000493795 GBGT1Q8N5D6 347 aa7.03□□□□□ -1.28
BRCA1-221ENST00000493795 VN1R2Q8NFZ6 395 aa7.03□□□□□ -1.28
BRCA1-221ENST00000493795 ZNF384Q8TF68 577 aa7.03□□□□□ -1.28
BRCA1-221ENST00000493795 ABHD3Q8WU67 409 aa7.03□□□□□ -1.28
BRCA1-221ENST00000493795 MEGF10Q96KG7 1140 aa7.03□□□□□ -1.28
BRCA1-221ENST00000493795 UBTD1Q9HAC8 227 aa7.03□□□□□ -1.28
BRCA1-221ENST00000493795 TNFRSF19Q9NS68 423 aa7.03□□□□□ -1.28
BRCA1-221ENST00000493795 PAM16Q9Y3D7 125 aa7.03□□□□□ -1.28
BRCA1-221ENST00000493795 KCNMB2Q9Y691 235 aa7.03□□□□□ -1.28
BRCA1-221ENST00000493795 A0A1W2PR48 441 aa7.03□□□□□ -1.28
BRCA1-221ENST00000493795 GABRA1P14867 456 aa7.03□□□□□ -1.28
BRCA1-221ENST00000493795 BSGP35613 385 aa7.03□□□□□ -1.28
BRCA1-221ENST00000493795 DYNLT3P51808 116 aa7.03□□□□□ -1.28
BRCA1-221ENST00000493795 PRSS36Q5K4E3 855 aa7.03□□□□□ -1.28
BRCA1-221ENST00000493795 C10orf113Q5VZT2 155 aa7.03□□□□□ -1.28
BRCA1-221ENST00000493795 METRNLQ641Q3 311 aa7.03□□□□□ -1.28
BRCA1-221ENST00000493795 SSX8Q7RTT4 187 aa7.03□□□□□ -1.28
BRCA1-221ENST00000493795 WDFY1Q8IWB7 410 aa7.03□□□□□ -1.28
BRCA1-221ENST00000493795 C20orf196Q8IYI0 205 aa7.03□□□□□ -1.28
BRCA1-221ENST00000493795 SYT8Q8NBV8 401 aa7.03□□□□□ -1.28
BRCA1-221ENST00000493795 SPPL3Q8TCT6 385 aa7.03□□□□□ -1.28
BRCA1-221ENST00000493795 LINC00052Q96N35 136 aa7.03□□□□□ -1.28
BRCA1-221ENST00000493795 AKIP1Q9NQ31 210 aa7.03□□□□□ -1.28
BRCA1-221ENST00000493795 IGKV6D-21A0A0A0MT36 114 aa7.02□□□□□ -1.28
BRCA1-221ENST00000493795 SHISA7A6NL88 538 aa7.02□□□□□ -1.28
BRCA1-221ENST00000493795 P2RY1P47900 373 aa7.02□□□□□ -1.28
BRCA1-221ENST00000493795 KLF3P57682 345 aaPredicted RBP7.02□□□□□ -1.28
BRCA1-221ENST00000493795 CIRBPQ14011 172 aaKnown RBP7.02□□□□□ -1.28
BRCA1-221ENST00000493795 DLEU7Q6UYE1 221 aa7.02□□□□□ -1.28
BRCA1-221ENST00000493795 LINC00469Q8N7U9 141 aa7.02□□□□□ -1.28
BRCA1-221ENST00000493795 SLC37A2Q8TED4 501 aa7.02□□□□□ -1.28
BRCA1-221ENST00000493795 LRP12Q9Y561 859 aa7.02□□□□□ -1.28
BRCA1-221ENST00000493795 MED1Q15648 1581 aaPredicted RBP7.02□□□□□ -1.29
BRCA1-221ENST00000493795 ADGRB2O60241 1585 aa7.02□□□□□ -1.29
BRCA1-221ENST00000493795 TMEM272A0A1B0GTI8 110 aa7.02□□□□□ -1.29
BRCA1-221ENST00000493795 OR2W5A6NFC9 320 aa7.02□□□□□ -1.29
BRCA1-221ENST00000493795 LGALS3P17931 250 aaKnown RBP7.02□□□□□ -1.29
BRCA1-221ENST00000493795 CDAP32320 146 aa7.02□□□□□ -1.29
BRCA1-221ENST00000493795 RAB9AP51151 201 aa7.02□□□□□ -1.29
BRCA1-221ENST00000493795 FOXF1Q12946 379 aa7.02□□□□□ -1.29
BRCA1-221ENST00000493795 RFLNAQ6ZTI6 216 aa7.02□□□□□ -1.29
BRCA1-221ENST00000493795 OR13G1Q8NGZ3 307 aa7.02□□□□□ -1.29
BRCA1-221ENST00000493795 C8orf44Q96CB5 159 aa7.02□□□□□ -1.29
BRCA1-221ENST00000493795 FBXL17Q9UF56 701 aa7.02□□□□□ -1.29
BRCA1-221ENST00000493795 PCOLCE2Q9UKZ9 415 aa7.02□□□□□ -1.29
BRCA1-221ENST00000493795 MBLAC1A4D2B0 266 aaPredicted RBP7.02□□□□□ -1.29
BRCA1-221ENST00000493795 FAM74A7A6NL05 159 aa7.02□□□□□ -1.29
BRCA1-221ENST00000493795 GFYI3L273 518 aa7.02□□□□□ -1.29
BRCA1-221ENST00000493795 BTF3P20290 206 aaKnown RBP7.02□□□□□ -1.29
BRCA1-221ENST00000493795 RPS27P42677 84 aaKnown RBP7.02□□□□□ -1.29
BRCA1-221ENST00000493795 IER3P46695 156 aa7.02□□□□□ -1.29
BRCA1-221ENST00000493795 DLK1P80370 383 aa7.02□□□□□ -1.29
BRCA1-221ENST00000493795 TNFAIP6P98066 277 aaPredicted RBP7.02□□□□□ -1.29
BRCA1-221ENST00000493795 ARHGAP5-AS1Q96IT6 56 aa7.02□□□□□ -1.29
BRCA1-221ENST00000493795 GPA33Q99795 319 aa7.02□□□□□ -1.29
BRCA1-221ENST00000493795 RAB1BQ9H0U4 201 aa7.02□□□□□ -1.29
BRCA1-221ENST00000493795 VAX2Q9UIW0 290 aa7.02□□□□□ -1.29
BRCA1-221ENST00000493795 LIPGQ9Y5X9 500 aa7.02□□□□□ -1.29
BRCA1-221ENST00000493795 SNURFLB1AK76 121 aa7.02□□□□□ -1.29
BRCA1-221ENST00000493795 SPNP16150 400 aa7.02□□□□□ -1.29
BRCA1-221ENST00000493795 DEFB103AP81534 67 aa7.02□□□□□ -1.29
BRCA1-221ENST00000493795 PPP1R1AQ13522 171 aa7.02□□□□□ -1.29
BRCA1-221ENST00000493795 RRN3P1Q2M238 152 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms