RNA–Protein interactions for RNA: ENST00000493727.5

UPF3A-210, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 937 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-210ENST00000493727 Q6ZR03 302 aa10.23□□□□□ -0.77
UPF3A-210ENST00000493727 LRRTM1Q86UE6 522 aa10.23□□□□□ -0.77
UPF3A-210ENST00000493727 TPRA1Q86W33 373 aa10.23□□□□□ -0.77
UPF3A-210ENST00000493727 PNLDC1Q8NA58 520 aaKnown RBP10.23□□□□□ -0.77
UPF3A-210ENST00000493727 DNAAF1Q8NEP3 725 aa10.23□□□□□ -0.77
UPF3A-210ENST00000493727 OR5P3Q8WZ94 311 aa10.23□□□□□ -0.77
UPF3A-210ENST00000493727 RNF170Q96K19 258 aa10.23□□□□□ -0.77
UPF3A-210ENST00000493727 SPACA5Q96QH8 159 aa10.23□□□□□ -0.77
UPF3A-210ENST00000493727 DIRC2Q96SL1 478 aa10.23□□□□□ -0.77
UPF3A-210ENST00000493727 TPK1Q9H3S4 243 aa10.23□□□□□ -0.77
UPF3A-210ENST00000493727 MS4A5Q9H3V2 200 aa10.23□□□□□ -0.77
UPF3A-210ENST00000493727 PPP1R3EQ9H7J1 279 aa10.23□□□□□ -0.77
UPF3A-210ENST00000493727 PLGRKTQ9HBL7 147 aa10.23□□□□□ -0.77
UPF3A-210ENST00000493727 C14orf119Q9NWQ9 140 aa10.23□□□□□ -0.77
UPF3A-210ENST00000493727 MEGF8Q7Z7M0 2845 aa10.22□□□□□ -0.77
UPF3A-210ENST00000493727 IGKV1-9A0A0C4DH69 117 aa10.22□□□□□ -0.77
UPF3A-210ENST00000493727 F5H5P2 479 aa10.22□□□□□ -0.77
UPF3A-210ENST00000493727 MLNRO43193 412 aa10.22□□□□□ -0.77
UPF3A-210ENST00000493727 NCR1O76036 304 aa10.22□□□□□ -0.77
UPF3A-210ENST00000493727 PLATP00750 562 aa10.22□□□□□ -0.77
UPF3A-210ENST00000493727 IL1AP01583 271 aa10.22□□□□□ -0.77
UPF3A-210ENST00000493727 CLEC2LP0C7M8 214 aa10.22□□□□□ -0.77
UPF3A-210ENST00000493727 SOX6P35712 828 aa10.22□□□□□ -0.77
UPF3A-210ENST00000493727 ZNF93P35789 620 aaPredicted RBP10.22□□□□□ -0.77
UPF3A-210ENST00000493727 POU3F4P49335 361 aa10.22□□□□□ -0.77
UPF3A-210ENST00000493727 RBP2P50120 134 aa10.22□□□□□ -0.77
UPF3A-210ENST00000493727 MMP15P51511 669 aa10.22□□□□□ -0.77
UPF3A-210ENST00000493727 MTCP1P56278 107 aa10.22□□□□□ -0.77
UPF3A-210ENST00000493727 OR10A3P58181 314 aa10.22□□□□□ -0.77
UPF3A-210ENST00000493727 GNG3P63215 75 aa10.22□□□□□ -0.77
UPF3A-210ENST00000493727 HNRNPA0Q13151 305 aaKnown RBP10.22□□□□□ -0.77
UPF3A-210ENST00000493727 CR1LQ2VPA4 569 aa10.22□□□□□ -0.77
UPF3A-210ENST00000493727 FOXB2Q5VYV0 432 aa10.22□□□□□ -0.77
UPF3A-210ENST00000493727 ZNF529Q6P280 563 aa10.22□□□□□ -0.77
UPF3A-210ENST00000493727 IL17RELQ6ZVW7 336 aa10.22□□□□□ -0.77
UPF3A-210ENST00000493727 LINC01356Q8N9X3 169 aa10.22□□□□□ -0.77
UPF3A-210ENST00000493727 OR52N4Q8NGI2 321 aa10.22□□□□□ -0.77
UPF3A-210ENST00000493727 OR5A2Q8NGI9 324 aa10.22□□□□□ -0.77
UPF3A-210ENST00000493727 HPSE2Q8WWQ2 592 aa10.22□□□□□ -0.77
UPF3A-210ENST00000493727 RFT1Q96AA3 541 aa10.22□□□□□ -0.77
UPF3A-210ENST00000493727 FOXRED1Q96CU9 486 aaPredicted RBP10.22□□□□□ -0.77
UPF3A-210ENST00000493727 DCUN1D5Q9BTE7 237 aa10.22□□□□□ -0.77
UPF3A-210ENST00000493727 ZDHHC8Q9ULC8 765 aa10.22□□□□□ -0.77
UPF3A-210ENST00000493727 TRRAPQ9Y4A5 3859 aa10.22□□□□□ -0.77
UPF3A-210ENST00000493727 IGHV3-64DA0A0J9YX35 117 aa10.21□□□□□ -0.77
UPF3A-210ENST00000493727 A6NLC8 198 aa10.21□□□□□ -0.77
UPF3A-210ENST00000493727 TMEM210A6NLX4 147 aa10.21□□□□□ -0.77
UPF3A-210ENST00000493727 C17orf100A8MU93 164 aa10.21□□□□□ -0.77
UPF3A-210ENST00000493727 CYB5AP00167 134 aa10.21□□□□□ -0.77
UPF3A-210ENST00000493727 IGHV1-46P01743 117 aa10.21□□□□□ -0.77
UPF3A-210ENST00000493727 ALDOBP05062 364 aa10.21□□□□□ -0.77
UPF3A-210ENST00000493727 GRPP07492 148 aa10.21□□□□□ -0.77
UPF3A-210ENST00000493727 ADRA2CP18825 462 aa10.21□□□□□ -0.77
UPF3A-210ENST00000493727 RPS19P39019 145 aaKnown RBP10.21□□□□□ -0.77
UPF3A-210ENST00000493727 SRP9P49458 86 aaKnown RBP10.21□□□□□ -0.77
UPF3A-210ENST00000493727 CAV3P56539 151 aa10.21□□□□□ -0.77
UPF3A-210ENST00000493727 ERVFRD-1P60508 538 aa10.21□□□□□ -0.77
UPF3A-210ENST00000493727 TNFAIP6P98066 277 aaPredicted RBP10.21□□□□□ -0.77
UPF3A-210ENST00000493727 RIN1Q13671 783 aa10.21□□□□□ -0.77
UPF3A-210ENST00000493727 FAM209AQ5JX71 171 aa10.21□□□□□ -0.77
UPF3A-210ENST00000493727 HES5Q5TA89 166 aa10.21□□□□□ -0.77
UPF3A-210ENST00000493727 KRT74Q7RTS7 529 aa10.21□□□□□ -0.77
UPF3A-210ENST00000493727 ZNF573Q86YE8 665 aa10.21□□□□□ -0.77
UPF3A-210ENST00000493727 OR5D18Q8NGL1 313 aa10.21□□□□□ -0.77
UPF3A-210ENST00000493727 OR2V2Q96R30 315 aa10.21□□□□□ -0.77
UPF3A-210ENST00000493727 S100A13Q99584 98 aa10.21□□□□□ -0.77
UPF3A-210ENST00000493727 NKX3-1Q99801 234 aaPredicted RBP10.21□□□□□ -0.77
UPF3A-210ENST00000493727 EGLN1Q9GZT9 426 aa10.21□□□□□ -0.77
UPF3A-210ENST00000493727 METTL17Q9H7H0 456 aaPredicted RBP10.21□□□□□ -0.77
UPF3A-210ENST00000493727 DECR2Q9NUI1 292 aa10.21□□□□□ -0.77
UPF3A-210ENST00000493727 V9GY05 133 aa10.21□□□□□ -0.77
UPF3A-210ENST00000493727 WNK2Q9Y3S1 2297 aa10.21□□□□□ -0.78
UPF3A-210ENST00000493727 PQLC2LA1A4F0 135 aa10.2□□□□□ -0.78
UPF3A-210ENST00000493727 LRP5LA4QPB2 252 aa10.2□□□□□ -0.78
UPF3A-210ENST00000493727 CD200P41217 278 aa10.2□□□□□ -0.78
UPF3A-210ENST00000493727 RANBP1P43487 201 aa10.2□□□□□ -0.78
UPF3A-210ENST00000493727 HAAOP46952 286 aa10.2□□□□□ -0.78
UPF3A-210ENST00000493727 RORCP51449 518 aa10.2□□□□□ -0.78
UPF3A-210ENST00000493727 KISS1Q15726 138 aa10.2□□□□□ -0.78
UPF3A-210ENST00000493727 RAB11BQ15907 218 aa10.2□□□□□ -0.78
UPF3A-210ENST00000493727 PCGF3Q3KNV8 242 aa10.2□□□□□ -0.78
UPF3A-210ENST00000493727 IDNKQ5T6J7 187 aa10.2□□□□□ -0.78
UPF3A-210ENST00000493727 PRAMEF6Q5VXH4 476 aa10.2□□□□□ -0.78
UPF3A-210ENST00000493727 AWAT2Q6E213 333 aa10.2□□□□□ -0.78
UPF3A-210ENST00000493727 SFXN4Q6P4A7 337 aa10.2□□□□□ -0.78
UPF3A-210ENST00000493727 CROCCP3Q8IVE0 287 aa10.2□□□□□ -0.78
UPF3A-210ENST00000493727 CDH26Q8IXH8 852 aa10.2□□□□□ -0.78
UPF3A-210ENST00000493727 TNFAIP8L1Q8WVP5 186 aa10.2□□□□□ -0.78
UPF3A-210ENST00000493727 ITLN1Q8WWA0 313 aa10.2□□□□□ -0.78
UPF3A-210ENST00000493727 SLC25A46Q96AG3 418 aa10.2□□□□□ -0.78
UPF3A-210ENST00000493727 UQCC2Q9BRT2 126 aa10.2□□□□□ -0.78
UPF3A-210ENST00000493727 FGF23Q9GZV9 251 aaPredicted RBP10.2□□□□□ -0.78
UPF3A-210ENST00000493727 ELL3Q9HB65 397 aaPredicted RBP10.2□□□□□ -0.78
UPF3A-210ENST00000493727 DAPK2Q9UIK4 370 aa10.2□□□□□ -0.78
UPF3A-210ENST00000493727 A0A1B0GWJ7 208 aa10.19□□□□□ -0.78
UPF3A-210ENST00000493727 hCG_1807616A0A1W2PRN6 198 aa10.19□□□□□ -0.78
UPF3A-210ENST00000493727 B4DSR2 109 aa10.19□□□□□ -0.78
UPF3A-210ENST00000493727 AIPO00170 330 aa10.19□□□□□ -0.78
UPF3A-210ENST00000493727 ADH4P08319 380 aa10.19□□□□□ -0.78
UPF3A-210ENST00000493727 TMEM225BP0DP42 221 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms