RNA–Protein interactions for RNA: ENST00000493379.1

VPS52-219, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-219ENST00000493379 PAPOLGQ9BWT3 736 aaKnown RBP5.61□□□□□ -1.51
VPS52-219ENST00000493379 PKIBQ9C010 78 aa5.61□□□□□ -1.51
VPS52-219ENST00000493379 DNTTIP1Q9H147 329 aa5.61□□□□□ -1.51
VPS52-219ENST00000493379 ZMAT3Q9HA38 289 aaKnown RBP5.61□□□□□ -1.51
VPS52-219ENST00000493379 RHOFQ9HBH0 211 aa5.61□□□□□ -1.51
VPS52-219ENST00000493379 HES4Q9HCC6 221 aa5.61□□□□□ -1.51
VPS52-219ENST00000493379 TRIM36Q9NQ86 728 aa5.61□□□□□ -1.51
VPS52-219ENST00000493379 CHCHD3Q9NX63 227 aaKnown RBP5.61□□□□□ -1.51
VPS52-219ENST00000493379 ING3Q9NXR8 418 aa5.61□□□□□ -1.51
VPS52-219ENST00000493379 RASL12Q9NYN1 266 aa5.61□□□□□ -1.51
VPS52-219ENST00000493379 ERGIC3Q9Y282 383 aa5.61□□□□□ -1.51
VPS52-219ENST00000493379 PPIAL4AQ9Y536 164 aa5.61□□□□□ -1.51
VPS52-219ENST00000493379 TRBV5-7A0A0A0MS05 114 aa5.6□□□□□ -1.51
VPS52-219ENST00000493379 TRAV38-1A0A0B4J264 116 aa5.6□□□□□ -1.51
VPS52-219ENST00000493379 ANKRD61A6NGH8 418 aa5.6□□□□□ -1.51
VPS52-219ENST00000493379 B4DSR2 109 aa5.6□□□□□ -1.51
VPS52-219ENST00000493379 ZNF732B4DXR9 585 aa5.6□□□□□ -1.51
VPS52-219ENST00000493379 PTGES3LE9PB15 166 aa5.6□□□□□ -1.51
VPS52-219ENST00000493379 H3BUI4 141 aa5.6□□□□□ -1.51
VPS52-219ENST00000493379 CDIPTO14735 213 aa5.6□□□□□ -1.51
VPS52-219ENST00000493379 LMX1BO60663 402 aa5.6□□□□□ -1.51
VPS52-219ENST00000493379 GATBO75879 557 aaKnown RBP5.6□□□□□ -1.51
VPS52-219ENST00000493379 SERPINA3P01011 423 aa5.6□□□□□ -1.51
VPS52-219ENST00000493379 IGFBP3P17936 291 aaPredicted RBP5.6□□□□□ -1.51
VPS52-219ENST00000493379 PRKACBP22694 351 aa5.6□□□□□ -1.51
VPS52-219ENST00000493379 IL2RGP31785 369 aa5.6□□□□□ -1.51
VPS52-219ENST00000493379 DVL1P1P54792 670 aaPredicted RBP5.6□□□□□ -1.51
VPS52-219ENST00000493379 GABARAPL2P60520 117 aa5.6□□□□□ -1.51
VPS52-219ENST00000493379 SPHARQ15513 63 aa5.6□□□□□ -1.51
VPS52-219ENST00000493379 YIF1BQ5BJH7 314 aa5.6□□□□□ -1.51
VPS52-219ENST00000493379 PRAMEF6Q5VXH4 476 aa5.6□□□□□ -1.51
VPS52-219ENST00000493379 ASPHD2Q6ICH7 369 aa5.6□□□□□ -1.51
VPS52-219ENST00000493379 ASCL4Q6XD76 172 aa5.6□□□□□ -1.51
VPS52-219ENST00000493379 DCDC5Q6ZRR9 648 aa5.6□□□□□ -1.51
VPS52-219ENST00000493379 MOB3CQ70IA8 216 aa5.6□□□□□ -1.51
VPS52-219ENST00000493379 AHSA2Q719I0 299 aa5.6□□□□□ -1.51
VPS52-219ENST00000493379 ZNF573Q86YE8 665 aa5.6□□□□□ -1.51
VPS52-219ENST00000493379 CDH26Q8IXH8 852 aa5.6□□□□□ -1.51
VPS52-219ENST00000493379 SPICQ8N5J4 248 aa5.6□□□□□ -1.51
VPS52-219ENST00000493379 MS4A15Q8N5U1 240 aa5.6□□□□□ -1.51
VPS52-219ENST00000493379 ZNF676Q8N7Q3 588 aa5.6□□□□□ -1.51
VPS52-219ENST00000493379 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.6□□□□□ -1.51
VPS52-219ENST00000493379 LINC01356Q8N9X3 169 aa5.6□□□□□ -1.51
VPS52-219ENST00000493379 OR51A4Q8NGJ6 313 aa5.6□□□□□ -1.51
VPS52-219ENST00000493379 OR5D14Q8NGL3 314 aa5.6□□□□□ -1.51
VPS52-219ENST00000493379 OR11L1Q8NGX0 322 aa5.6□□□□□ -1.51
VPS52-219ENST00000493379 OR10AC1Q8NH08 325 aa5.6□□□□□ -1.51
VPS52-219ENST00000493379 OR8S1Q8NH09 359 aa5.6□□□□□ -1.51
VPS52-219ENST00000493379 ZNF671Q8TAW3 534 aa5.6□□□□□ -1.51
VPS52-219ENST00000493379 GPR148Q8TDV2 347 aa5.6□□□□□ -1.51
VPS52-219ENST00000493379 SGCDQ92629 289 aa5.6□□□□□ -1.51
VPS52-219ENST00000493379 GHSRQ92847 366 aa5.6□□□□□ -1.51
VPS52-219ENST00000493379 SPSB1Q96BD6 273 aa5.6□□□□□ -1.51
VPS52-219ENST00000493379 FGGYQ96C11 551 aa5.6□□□□□ -1.51
VPS52-219ENST00000493379 AJUBAQ96IF1 538 aa5.6□□□□□ -1.51
VPS52-219ENST00000493379 HIST1H2AAQ96QV6 131 aa5.6□□□□□ -1.51
VPS52-219ENST00000493379 NRIP2Q9BQI9 281 aa5.6□□□□□ -1.51
VPS52-219ENST00000493379 SPATA25Q9BR10 227 aa5.6□□□□□ -1.51
VPS52-219ENST00000493379 TMEM246Q9BRR3 403 aa5.6□□□□□ -1.51
VPS52-219ENST00000493379 COMMD4Q9H0A8 199 aa5.6□□□□□ -1.51
VPS52-219ENST00000493379 Q9H521 79 aa5.6□□□□□ -1.51
VPS52-219ENST00000493379 ZNF665Q9H7R5 613 aa5.6□□□□□ -1.51
VPS52-219ENST00000493379 ERVK-18Q9QC07 812 aa5.6□□□□□ -1.51
VPS52-219ENST00000493379 MIOXQ9UGB7 285 aa5.6□□□□□ -1.51
VPS52-219ENST00000493379 TANC2Q9HCD6 1990 aa5.6□□□□□ -1.51
VPS52-219ENST00000493379 TENM3Q9P273 2699 aa5.6□□□□□ -1.51
VPS52-219ENST00000493379 MALRD1Q5VYJ5 2156 aa5.59□□□□□ -1.51
VPS52-219ENST00000493379 IGKV1-27A0A075B6S5 117 aa5.59□□□□□ -1.51
VPS52-219ENST00000493379 OOEPA6NGQ2 149 aa5.59□□□□□ -1.51
VPS52-219ENST00000493379 CEACAM18A8MTB9 384 aa5.59□□□□□ -1.51
VPS52-219ENST00000493379 FAM157AC9JC47 383 aa5.59□□□□□ -1.51
VPS52-219ENST00000493379 J3QT63 122 aa5.59□□□□□ -1.51
VPS52-219ENST00000493379 RGS10O43665 173 aa5.59□□□□□ -1.51
VPS52-219ENST00000493379 FCN3O75636 299 aa5.59□□□□□ -1.51
VPS52-219ENST00000493379 RHBDL1O75783 438 aa5.59□□□□□ -1.51
VPS52-219ENST00000493379 TOX4O94842 621 aa5.59□□□□□ -1.51
VPS52-219ENST00000493379 CYB5R3P00387 301 aaPredicted RBP5.59□□□□□ -1.51
VPS52-219ENST00000493379 GRPP07492 148 aa5.59□□□□□ -1.51
VPS52-219ENST00000493379 PGA5P0DJD9 388 aa5.59□□□□□ -1.51
VPS52-219ENST00000493379 PPIAL4GP0DN37 164 aa5.59□□□□□ -1.51
VPS52-219ENST00000493379 ATF1P18846 271 aa5.59□□□□□ -1.51
VPS52-219ENST00000493379 MALP21145 153 aa5.59□□□□□ -1.51
VPS52-219ENST00000493379 PCMT1P22061 227 aa5.59□□□□□ -1.51
VPS52-219ENST00000493379 GATA3P23771 443 aa5.59□□□□□ -1.51
VPS52-219ENST00000493379 NPY4RP50391 375 aa5.59□□□□□ -1.51
VPS52-219ENST00000493379 GPM6AP51674 278 aa5.59□□□□□ -1.51
VPS52-219ENST00000493379 EMX1Q04741 257 aaPredicted RBP5.59□□□□□ -1.51
VPS52-219ENST00000493379 TBCEQ15813 527 aaPredicted RBP5.59□□□□□ -1.51
VPS52-219ENST00000493379 KCNJ8Q15842 424 aa5.59□□□□□ -1.51
VPS52-219ENST00000493379 CEP78Q5JTW2 689 aa5.59□□□□□ -1.51
VPS52-219ENST00000493379 ZNF788Q6ZQV5 615 aa5.59□□□□□ -1.51
VPS52-219ENST00000493379 ZNF826PQ6ZT77 177 aa5.59□□□□□ -1.51
VPS52-219ENST00000493379 CALHM1Q8IU99 346 aa5.59□□□□□ -1.51
VPS52-219ENST00000493379 SAXO1Q8IYX7 474 aa5.59□□□□□ -1.51
VPS52-219ENST00000493379 ZSCAN4Q8NAM6 433 aaPredicted RBP5.59□□□□□ -1.51
VPS52-219ENST00000493379 POC1AQ8NBT0 407 aa5.59□□□□□ -1.51
VPS52-219ENST00000493379 ANGPTL6Q8NI99 470 aa5.59□□□□□ -1.51
VPS52-219ENST00000493379 PHYHIPQ92561 330 aa5.59□□□□□ -1.51
VPS52-219ENST00000493379 THRSPQ92748 146 aa5.59□□□□□ -1.51
VPS52-219ENST00000493379 GCDHQ92947 438 aaPredicted RBP5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms