RNA–Protein interactions for RNA: ENST00000492859.5

BRCA1-220, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-220ENST00000492859 LOC100130705A0A1B0GUX0 176 aa3.57□□□□□ -1.84
BRCA1-220ENST00000492859 CLDN25C9JDP6 229 aa3.57□□□□□ -1.84
BRCA1-220ENST00000492859 FAM90A26D6RGX4 464 aa3.57□□□□□ -1.84
BRCA1-220ENST00000492859 E7ENX8 843 aa3.57□□□□□ -1.84
BRCA1-220ENST00000492859 RHODO00212 210 aa3.57□□□□□ -1.84
BRCA1-220ENST00000492859 HCRTR1O43613 425 aa3.57□□□□□ -1.84
BRCA1-220ENST00000492859 MPC2O95563 127 aa3.57□□□□□ -1.84
BRCA1-220ENST00000492859 KNG1P01042 644 aa3.57□□□□□ -1.84
BRCA1-220ENST00000492859 NRASP01111 189 aa3.57□□□□□ -1.84
BRCA1-220ENST00000492859 HBZP02008 142 aa3.57□□□□□ -1.84
BRCA1-220ENST00000492859 REG1AP05451 166 aa3.57□□□□□ -1.84
BRCA1-220ENST00000492859 CD48P09326 243 aa3.57□□□□□ -1.84
BRCA1-220ENST00000492859 SMIM17P0DL12 118 aa3.57□□□□□ -1.84
BRCA1-220ENST00000492859 SELEP16581 610 aa3.57□□□□□ -1.84
BRCA1-220ENST00000492859 MYL12AP19105 171 aa3.57□□□□□ -1.84
BRCA1-220ENST00000492859 TNFRSF1BP20333 461 aa3.57□□□□□ -1.84
BRCA1-220ENST00000492859 RPS3P23396 243 aaKnown RBP eCLIP3.57□□□□□ -1.84
BRCA1-220ENST00000492859 PRTN3P24158 256 aa3.57□□□□□ -1.84
BRCA1-220ENST00000492859 CMPK1P30085 196 aa3.57□□□□□ -1.84
BRCA1-220ENST00000492859 RPA3P35244 121 aaPredicted RBP3.57□□□□□ -1.84
BRCA1-220ENST00000492859 SFTPDP35247 375 aa3.57□□□□□ -1.84
BRCA1-220ENST00000492859 ETV6P41212 452 aa3.57□□□□□ -1.84
BRCA1-220ENST00000492859 GALR1P47211 349 aa3.57□□□□□ -1.84
BRCA1-220ENST00000492859 PGFP49763 221 aa3.57□□□□□ -1.84
BRCA1-220ENST00000492859 CLDN17P56750 224 aa3.57□□□□□ -1.84
BRCA1-220ENST00000492859 ISL1P61371 349 aa3.57□□□□□ -1.84
BRCA1-220ENST00000492859 WDR5P61964 334 aaKnown RBP3.57□□□□□ -1.84
BRCA1-220ENST00000492859 RPS28P62857 69 aaKnown RBP3.57□□□□□ -1.84
BRCA1-220ENST00000492859 RUNX3Q13761 415 aa3.57□□□□□ -1.84
BRCA1-220ENST00000492859 PMVKQ15126 192 aa3.57□□□□□ -1.84
BRCA1-220ENST00000492859 UBE2V2Q15819 145 aa3.57□□□□□ -1.84
BRCA1-220ENST00000492859 IZUMO4Q1ZYL8 232 aa3.57□□□□□ -1.84
BRCA1-220ENST00000492859 ENTPD8Q5MY95 495 aa3.57□□□□□ -1.84
BRCA1-220ENST00000492859 B3GNTL1Q67FW5 361 aaPredicted RBP3.57□□□□□ -1.84
BRCA1-220ENST00000492859 TNFAIP8L2Q6P589 184 aaPredicted RBP3.57□□□□□ -1.84
BRCA1-220ENST00000492859 ARL9Q6T311 187 aa3.57□□□□□ -1.84
BRCA1-220ENST00000492859 FAM183BPQ6ZVS7 135 aa3.57□□□□□ -1.84
BRCA1-220ENST00000492859 PRSS41Q7RTY9 318 aa3.57□□□□□ -1.84
BRCA1-220ENST00000492859 BCDIN3DQ7Z5W3 292 aaKnown RBP3.57□□□□□ -1.84
BRCA1-220ENST00000492859 AMIGO2Q86SJ2 522 aa3.57□□□□□ -1.84
BRCA1-220ENST00000492859 TCTE3Q8IZS6 198 aa3.57□□□□□ -1.84
BRCA1-220ENST00000492859 KLHDC1Q8N7A1 406 aa3.57□□□□□ -1.84
BRCA1-220ENST00000492859 ZNF740Q8NDX6 193 aa3.57□□□□□ -1.84
BRCA1-220ENST00000492859 OR4F17Q8NGA8 305 aa3.57□□□□□ -1.84
BRCA1-220ENST00000492859 OR5AR1Q8NGP9 310 aa3.57□□□□□ -1.84
BRCA1-220ENST00000492859 OR13A1Q8NGR1 328 aa3.57□□□□□ -1.84
BRCA1-220ENST00000492859 OR2K2Q8NGT1 345 aa3.57□□□□□ -1.84
BRCA1-220ENST00000492859 ZNF420Q8TAQ5 688 aaPredicted RBP3.57□□□□□ -1.84
BRCA1-220ENST00000492859 FGFBP3Q8TAT2 258 aa3.57□□□□□ -1.84
BRCA1-220ENST00000492859 SHKBP1Q8TBC3 707 aa3.57□□□□□ -1.84
BRCA1-220ENST00000492859 ZNF502Q8TBZ5 544 aa3.57□□□□□ -1.84
BRCA1-220ENST00000492859 ZPLD1Q8TCW7 415 aa3.57□□□□□ -1.84
BRCA1-220ENST00000492859 VN1R17PQ8TDU5 208 aa3.57□□□□□ -1.84
BRCA1-220ENST00000492859 S100ZQ8WXG8 99 aa3.57□□□□□ -1.84
BRCA1-220ENST00000492859 TMEM159Q96B96 161 aa3.57□□□□□ -1.84
BRCA1-220ENST00000492859 OR4F4Q96R69 305 aa3.57□□□□□ -1.84
BRCA1-220ENST00000492859 TRIB3Q96RU7 358 aa3.57□□□□□ -1.84
BRCA1-220ENST00000492859 PDCD1LG2Q9BQ51 273 aa3.57□□□□□ -1.84
BRCA1-220ENST00000492859 PSMG3Q9BT73 122 aaPredicted RBP3.57□□□□□ -1.84
BRCA1-220ENST00000492859 GATA5Q9BWX5 397 aaPredicted RBP3.57□□□□□ -1.84
BRCA1-220ENST00000492859 APOBEC3GQ9HC16 384 aaKnown RBP3.57□□□□□ -1.84
BRCA1-220ENST00000492859 SLC25A19Q9HC21 320 aa3.57□□□□□ -1.84
BRCA1-220ENST00000492859 SAR1AQ9NR31 198 aa3.57□□□□□ -1.84
BRCA1-220ENST00000492859 SCN3BQ9NY72 215 aa3.57□□□□□ -1.84
BRCA1-220ENST00000492859 SPANXCQ9NY87 97 aa3.57□□□□□ -1.84
BRCA1-220ENST00000492859 NAT8BQ9UHF3 227 aa3.57□□□□□ -1.84
BRCA1-220ENST00000492859 HS3ST2Q9Y278 367 aa3.57□□□□□ -1.84
BRCA1-220ENST00000492859 NTNG1Q9Y2I2 539 aa3.57□□□□□ -1.84
BRCA1-220ENST00000492859 SBDSQ9Y3A5 250 aaKnown RBP eCLIP3.57□□□□□ -1.84
BRCA1-220ENST00000492859 HDGFL3Q9Y3E1 203 aa3.57□□□□□ -1.84
BRCA1-220ENST00000492859 ADGRL2O95490 1459 aa3.57□□□□□ -1.84
BRCA1-220ENST00000492859 SMCHD1A6NHR9 2005 aa3.56□□□□□ -1.84
BRCA1-220ENST00000492859 LOC102724200A0A096LPH7 203 aaPredicted RBP3.56□□□□□ -1.84
BRCA1-220ENST00000492859 FABP5P3A8MUU1 101 aa3.56□□□□□ -1.84
BRCA1-220ENST00000492859 BTNL10A8MVZ5 291 aa3.56□□□□□ -1.84
BRCA1-220ENST00000492859 SPINT2O43291 252 aa3.56□□□□□ -1.84
BRCA1-220ENST00000492859 TMPRSS11DO60235 418 aa3.56□□□□□ -1.84
BRCA1-220ENST00000492859 RAMP2O60895 175 aa3.56□□□□□ -1.84
BRCA1-220ENST00000492859 ICOSLGO75144 302 aa3.56□□□□□ -1.84
BRCA1-220ENST00000492859 STC2O76061 302 aa3.56□□□□□ -1.84
BRCA1-220ENST00000492859 KBTBD11O94819 623 aa3.56□□□□□ -1.84
BRCA1-220ENST00000492859 PLA2G1BP04054 148 aaKnown RBP3.56□□□□□ -1.84
BRCA1-220ENST00000492859 GYPCP04921 128 aa3.56□□□□□ -1.84
BRCA1-220ENST00000492859 APODP05090 189 aa3.56□□□□□ -1.84
BRCA1-220ENST00000492859 ALPLP05186 524 aa3.56□□□□□ -1.84
BRCA1-220ENST00000492859 DBIP07108 87 aaKnown RBP3.56□□□□□ -1.84
BRCA1-220ENST00000492859 H1F0P07305 194 aaKnown RBP3.56□□□□□ -1.84
BRCA1-220ENST00000492859 FGF2P09038 288 aa3.56□□□□□ -1.84
BRCA1-220ENST00000492859 UCHL1P09936 223 aa3.56□□□□□ -1.84
BRCA1-220ENST00000492859 PVRP15151 417 aa3.56□□□□□ -1.84
BRCA1-220ENST00000492859 HOXA5P20719 270 aa3.56□□□□□ -1.84
BRCA1-220ENST00000492859 CHATP28329 748 aa3.56□□□□□ -1.84
BRCA1-220ENST00000492859 TNFSF8P32971 234 aa3.56□□□□□ -1.84
BRCA1-220ENST00000492859 ADMP35318 185 aa3.56□□□□□ -1.84
BRCA1-220ENST00000492859 UBE2E1P51965 193 aa3.56□□□□□ -1.84
BRCA1-220ENST00000492859 ERVFC1-1P60608 527 aa3.56□□□□□ -1.84
BRCA1-220ENST00000492859 NCS1P62166 190 aa3.56□□□□□ -1.84
BRCA1-220ENST00000492859 ZNF154Q13106 437 aa3.56□□□□□ -1.84
BRCA1-220ENST00000492859 NECTIN1Q15223 517 aa3.56□□□□□ -1.84
BRCA1-220ENST00000492859 RHEBQ15382 184 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms