RNA–Protein interactions for RNA: ENST00000492602.5

SEC13-219, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, human

TSL 3

Gene SEC13, Length 393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEC13-219	ENST00000492602	NAA40	Q86UY6	237 aa		4.16	□□□□□ -1.74
SEC13-219	ENST00000492602	COMMD2	Q86X83	199 aa		4.16	□□□□□ -1.74
SEC13-219	ENST00000492602	DEFB107A	Q8IZN7	70 aa		4.16	□□□□□ -1.74
SEC13-219	ENST00000492602	LNX2	Q8N448	690 aa		4.16	□□□□□ -1.74
SEC13-219	ENST00000492602	FAM71E2	Q8N5Q1	922 aa		4.16	□□□□□ -1.74
SEC13-219	ENST00000492602	RNF148	Q8N7C7	305 aa		4.16	□□□□□ -1.74
SEC13-219	ENST00000492602	NDNF	Q8TB73	568 aa		4.16	□□□□□ -1.74
SEC13-219	ENST00000492602	THEM6	Q8WUY1	208 aa		4.16	□□□□□ -1.74
SEC13-219	ENST00000492602	TSEN15	Q8WW01	171 aa	Known RBP	4.16	□□□□□ -1.74
SEC13-219	ENST00000492602	DCUN1D4	Q92564	292 aa		4.16	□□□□□ -1.74
SEC13-219	ENST00000492602	C12orf43	Q96C57	262 aa	Known RBP	4.16	□□□□□ -1.74
SEC13-219	ENST00000492602	PGAM5	Q96HS1	289 aa		4.16	□□□□□ -1.74
SEC13-219	ENST00000492602	TSSK2	Q96PF2	358 aa		4.16	□□□□□ -1.74
SEC13-219	ENST00000492602	RBM14	Q96PK6	669 aa	Known RBP	4.16	□□□□□ -1.74
SEC13-219	ENST00000492602	GAFA1	Q96PS6	74 aa		4.16	□□□□□ -1.74
SEC13-219	ENST00000492602	INTS14	Q96SY0	518 aa		4.16	□□□□□ -1.74
SEC13-219	ENST00000492602	KCNJ15	Q99712	375 aa		4.16	□□□□□ -1.74
SEC13-219	ENST00000492602	ADI1	Q9BV57	179 aa		4.16	□□□□□ -1.74
SEC13-219	ENST00000492602	RTL8A	Q9BWD3	113 aa		4.16	□□□□□ -1.74
SEC13-219	ENST00000492602	GHITM	Q9H3K2	345 aa		4.16	□□□□□ -1.74
SEC13-219	ENST00000492602	FN3K	Q9H479	309 aa		4.16	□□□□□ -1.74
SEC13-219	ENST00000492602	MAGIX	Q9H6Y5	334 aa		4.16	□□□□□ -1.74
SEC13-219	ENST00000492602	RNPEPL1	Q9HAU8	725 aa		4.16	□□□□□ -1.74
SEC13-219	ENST00000492602	C19orf12	Q9NSK7	152 aa		4.16	□□□□□ -1.74
SEC13-219	ENST00000492602	FAM53C	Q9NYF3	392 aa		4.16	□□□□□ -1.74
SEC13-219	ENST00000492602	IL20	Q9NYY1	176 aa		4.16	□□□□□ -1.74
SEC13-219	ENST00000492602	SIGLEC8	Q9NYZ4	499 aa		4.16	□□□□□ -1.74
SEC13-219	ENST00000492602	ACTR3B	Q9P1U1	418 aa		4.16	□□□□□ -1.74
SEC13-219	ENST00000492602	ABCD2	Q9UBJ2	740 aa		4.16	□□□□□ -1.74
SEC13-219	ENST00000492602	ENOPH1	Q9UHY7	261 aa		4.16	□□□□□ -1.74
SEC13-219	ENST00000492602	SAMHD1	Q9Y3Z3	626 aa	Known RBP	4.16	□□□□□ -1.74
SEC13-219	ENST00000492602	MPC1	Q9Y5U8	109 aa		4.16	□□□□□ -1.74
SEC13-219	ENST00000492602	CEPT1	Q9Y6K0	416 aa		4.16	□□□□□ -1.74
SEC13-219	ENST00000492602	CDH10	Q9Y6N8	788 aa		4.16	□□□□□ -1.74
SEC13-219	ENST00000492602	DNAH5	Q8TE73	4624 aa		4.16	□□□□□ -1.74
SEC13-219	ENST00000492602	MAGEA13P	A6NCF6	341 aa		4.15	□□□□□ -1.75
SEC13-219	ENST00000492602	OR6C68	A6NDL8	312 aa		4.15	□□□□□ -1.75
SEC13-219	ENST00000492602	TMEM210	A6NLX4	147 aa		4.15	□□□□□ -1.75
SEC13-219	ENST00000492602	ANKHD1-EIF4EBP3	H7C0V5	636 aa	Predicted RBP	4.15	□□□□□ -1.75
SEC13-219	ENST00000492602		J3QL48	77 aa		4.15	□□□□□ -1.75
SEC13-219	ENST00000492602		M0QZK8	103 aa		4.15	□□□□□ -1.75
SEC13-219	ENST00000492602	ARPC2	O15144	300 aa		4.15	□□□□□ -1.75
SEC13-219	ENST00000492602	SIGLEC5	O15389	551 aa		4.15	□□□□□ -1.75
SEC13-219	ENST00000492602	HSPA12A	O43301	675 aa		4.15	□□□□□ -1.75
SEC13-219	ENST00000492602	SNX3	O60493	162 aa		4.15	□□□□□ -1.75
SEC13-219	ENST00000492602	DIRAS1	O95057	198 aa		4.15	□□□□□ -1.75
SEC13-219	ENST00000492602	CST1	P01037	141 aa		4.15	□□□□□ -1.75
SEC13-219	ENST00000492602	RAP2A	P10114	183 aa		4.15	□□□□□ -1.75
SEC13-219	ENST00000492602	ATP6V1B1	P15313	513 aa		4.15	□□□□□ -1.75
SEC13-219	ENST00000492602	CCL3L1	P16619	93 aa		4.15	□□□□□ -1.75
SEC13-219	ENST00000492602	ATP6V1E1	P36543	226 aa		4.15	□□□□□ -1.75
SEC13-219	ENST00000492602	MAP2K3	P46734	347 aa		4.15	□□□□□ -1.75
SEC13-219	ENST00000492602	GSS	P48637	474 aa		4.15	□□□□□ -1.75
SEC13-219	ENST00000492602	PRKX	P51817	358 aa		4.15	□□□□□ -1.75
SEC13-219	ENST00000492602	CAPZA1	P52907	286 aa		4.15	□□□□□ -1.75
SEC13-219	ENST00000492602	RPS7	P62081	194 aa	Known RBP	4.15	□□□□□ -1.75
SEC13-219	ENST00000492602	GNGT1	P63211	74 aa		4.15	□□□□□ -1.75
SEC13-219	ENST00000492602	TRIM25	Q14258	630 aa	Known RBP	4.15	□□□□□ -1.75
SEC13-219	ENST00000492602	SNAPC1	Q16533	368 aa		4.15	□□□□□ -1.75
SEC13-219	ENST00000492602	PNLIPRP3	Q17RR3	467 aa		4.15	□□□□□ -1.75
SEC13-219	ENST00000492602	RSPO1	Q2MKA7	263 aa	Predicted RBP	4.15	□□□□□ -1.75
SEC13-219	ENST00000492602	ASPHD1	Q5U4P2	390 aa		4.15	□□□□□ -1.75
SEC13-219	ENST00000492602	LCN1P1	Q5VSP4	162 aa		4.15	□□□□□ -1.75
SEC13-219	ENST00000492602	ZNF626	Q68DY1	528 aa		4.15	□□□□□ -1.75
SEC13-219	ENST00000492602	OR2T5	Q6IEZ7	315 aa		4.15	□□□□□ -1.75
SEC13-219	ENST00000492602	CGB2	Q6NT52	195 aa		4.15	□□□□□ -1.75
SEC13-219	ENST00000492602	ACSM6	Q6P461	480 aa		4.15	□□□□□ -1.75
SEC13-219	ENST00000492602	LYPD4	Q6UWN0	246 aa		4.15	□□□□□ -1.75
SEC13-219	ENST00000492602	CYP2R1	Q6VVX0	501 aa		4.15	□□□□□ -1.75
SEC13-219	ENST00000492602	PTCHD4	Q6ZW05	846 aa		4.15	□□□□□ -1.75
SEC13-219	ENST00000492602	HAPLN4	Q86UW8	402 aa		4.15	□□□□□ -1.75
SEC13-219	ENST00000492602	LINC00346	Q8IVM7	164 aa		4.15	□□□□□ -1.75
SEC13-219	ENST00000492602	C10orf67	Q8IYJ2	551 aa		4.15	□□□□□ -1.75
SEC13-219	ENST00000492602	AQP11	Q8NBQ7	271 aa		4.15	□□□□□ -1.75
SEC13-219	ENST00000492602	ZNRF1	Q8ND25	227 aa		4.15	□□□□□ -1.75
SEC13-219	ENST00000492602	TMEM185A	Q8NFB2	350 aa		4.15	□□□□□ -1.75
SEC13-219	ENST00000492602	OR1N2	Q8NGR9	330 aa		4.15	□□□□□ -1.75
SEC13-219	ENST00000492602	OR13D1	Q8NGV5	346 aa		4.15	□□□□□ -1.75
SEC13-219	ENST00000492602	OR2T29	Q8NH02	315 aa		4.15	□□□□□ -1.75
SEC13-219	ENST00000492602	GIPC3	Q8TF64	312 aa		4.15	□□□□□ -1.75
SEC13-219	ENST00000492602	C4orf3	Q8WVX3	66 aa		4.15	□□□□□ -1.75
SEC13-219	ENST00000492602	ASB17	Q8WXJ9	295 aa		4.15	□□□□□ -1.75
SEC13-219	ENST00000492602	DNAJC9	Q8WXX5	260 aa		4.15	□□□□□ -1.75
SEC13-219	ENST00000492602	RNF183	Q96D59	192 aa		4.15	□□□□□ -1.75
SEC13-219	ENST00000492602	SLAMF6	Q96DU3	332 aa		4.15	□□□□□ -1.75
SEC13-219	ENST00000492602	REEP6	Q96HR9	211 aa		4.15	□□□□□ -1.75
SEC13-219	ENST00000492602	DHRS1	Q96LJ7	313 aa		4.15	□□□□□ -1.75
SEC13-219	ENST00000492602	C18orf15	Q96N68	181 aa		4.15	□□□□□ -1.75
SEC13-219	ENST00000492602	PAPOLG	Q9BWT3	736 aa	Known RBP	4.15	□□□□□ -1.75
SEC13-219	ENST00000492602	MRO	Q9BYG7	248 aa		4.15	□□□□□ -1.75
SEC13-219	ENST00000492602	DNTTIP1	Q9H147	329 aa		4.15	□□□□□ -1.75
SEC13-219	ENST00000492602	NEK6	Q9HC98	313 aa		4.15	□□□□□ -1.75
SEC13-219	ENST00000492602	BRD7	Q9NPI1	651 aa		4.15	□□□□□ -1.75
SEC13-219	ENST00000492602	RASL12	Q9NYN1	266 aa		4.15	□□□□□ -1.75
SEC13-219	ENST00000492602	HAO2	Q9NYQ3	351 aa		4.15	□□□□□ -1.75
SEC13-219	ENST00000492602	USE1	Q9NZ43	259 aa		4.15	□□□□□ -1.75
SEC13-219	ENST00000492602	LAMP5	Q9UJQ1	280 aa		4.15	□□□□□ -1.75
SEC13-219	ENST00000492602	LHFPL6	Q9Y693	200 aa		4.15	□□□□□ -1.75
SEC13-219	ENST00000492602	SRRM2	Q9UQ35	2752 aa	Known RBP	4.15	□□□□□ -1.75
SEC13-219	ENST00000492602	TVP23A	A6NH52	213 aa		4.14	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms