RNA–Protein interactions for RNA: ENST00000490910.5

CRNKL1-204, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,183 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-204ENST00000490910 FAM3BP58499 235 aaPredicted RBP10□□□□□ -0.81
CRNKL1-204ENST00000490910 MSMO1Q15800 293 aa10□□□□□ -0.81
CRNKL1-204ENST00000490910 C10orf91Q5T1B1 145 aa10□□□□□ -0.81
CRNKL1-204ENST00000490910 DMRTA1Q5VZB9 504 aa10□□□□□ -0.81
CRNKL1-204ENST00000490910 HIST3H2BBQ8N257 126 aa10□□□□□ -0.81
CRNKL1-204ENST00000490910 C12orf76Q8N812 135 aaPredicted RBP10□□□□□ -0.81
CRNKL1-204ENST00000490910 VAX2Q9UIW0 290 aa10□□□□□ -0.81
CRNKL1-204ENST00000490910 NAGKQ9UJ70 344 aa10□□□□□ -0.81
CRNKL1-204ENST00000490910 RP1P56715 2156 aa9.99□□□□□ -0.81
CRNKL1-204ENST00000490910 XIRP1Q702N8 1843 aaKnown RBP9.99□□□□□ -0.81
CRNKL1-204ENST00000490910 DUXBA0A1W2PPF3 345 aa9.99□□□□□ -0.81
CRNKL1-204ENST00000490910 C4orf51C9J302 202 aa9.99□□□□□ -0.81
CRNKL1-204ENST00000490910 SNRPCP09234 159 aaKnown RBP9.99□□□□□ -0.81
CRNKL1-204ENST00000490910 CD82P27701 267 aa9.99□□□□□ -0.81
CRNKL1-204ENST00000490910 GJC3Q8NFK1 279 aa9.99□□□□□ -0.81
CRNKL1-204ENST00000490910 ADAT3Q96EY9 351 aaPredicted RBP9.99□□□□□ -0.81
CRNKL1-204ENST00000490910 ACY3Q96HD9 319 aa9.99□□□□□ -0.81
CRNKL1-204ENST00000490910 PECRQ9BY49 303 aa9.99□□□□□ -0.81
CRNKL1-204ENST00000490910 TRBV6-7A0A0A0MS04 114 aa9.99□□□□□ -0.81
CRNKL1-204ENST00000490910 ADAM20O43506 726 aa9.99□□□□□ -0.81
CRNKL1-204ENST00000490910 OR2J2O76002 312 aa9.99□□□□□ -0.81
CRNKL1-204ENST00000490910 IAPPP10997 89 aa9.99□□□□□ -0.81
CRNKL1-204ENST00000490910 FAHP16930 419 aa9.99□□□□□ -0.81
CRNKL1-204ENST00000490910 NTF3P20783 257 aa9.99□□□□□ -0.81
CRNKL1-204ENST00000490910 FAM53BQ14153 422 aa9.99□□□□□ -0.81
CRNKL1-204ENST00000490910 FAM78BQ5VT40 261 aa9.99□□□□□ -0.81
CRNKL1-204ENST00000490910 GFI1BQ5VTD9 330 aa9.99□□□□□ -0.81
CRNKL1-204ENST00000490910 C1QL3Q5VWW1 255 aa9.99□□□□□ -0.81
CRNKL1-204ENST00000490910 DPPA3Q6W0C5 159 aa9.99□□□□□ -0.81
CRNKL1-204ENST00000490910 ACTR3CQ9C0K3 210 aaPredicted RBP9.99□□□□□ -0.81
CRNKL1-204ENST00000490910 LPAR5Q9H1C0 372 aa9.99□□□□□ -0.81
CRNKL1-204ENST00000490910 LHX6Q9UPM6 363 aa9.99□□□□□ -0.81
CRNKL1-204ENST00000490910 DTX4Q9Y2E6 619 aa9.99□□□□□ -0.81
CRNKL1-204ENST00000490910 A0A087WWC5 75 aa9.99□□□□□ -0.81
CRNKL1-204ENST00000490910 IL33O95760 270 aa9.99□□□□□ -0.81
CRNKL1-204ENST00000490910 TLE1Q04724 770 aa9.99□□□□□ -0.81
CRNKL1-204ENST00000490910 IL24Q13007 206 aa9.99□□□□□ -0.81
CRNKL1-204ENST00000490910 FZD5Q13467 585 aa9.99□□□□□ -0.81
CRNKL1-204ENST00000490910 HERPUD1Q15011 391 aa9.99□□□□□ -0.81
CRNKL1-204ENST00000490910 PDLIM3Q53GG5 364 aaPredicted RBP9.99□□□□□ -0.81
CRNKL1-204ENST00000490910 THEM4Q5T1C6 240 aa9.99□□□□□ -0.81
CRNKL1-204ENST00000490910 ZNF100Q8IYN0 542 aa9.99□□□□□ -0.81
CRNKL1-204ENST00000490910 MUCL1Q96DR8 90 aa9.99□□□□□ -0.81
CRNKL1-204ENST00000490910 UHRF2Q96PU4 802 aa9.99□□□□□ -0.81
CRNKL1-204ENST00000490910 PLEKHA3Q9HB20 300 aa9.99□□□□□ -0.81
CRNKL1-204ENST00000490910 STARD10Q9Y365 291 aa9.99□□□□□ -0.81
CRNKL1-204ENST00000490910 POLR2AP24928 1970 aaKnown RBP9.99□□□□□ -0.81
CRNKL1-204ENST00000490910 PATJQ8NI35 1801 aa9.98□□□□□ -0.81
CRNKL1-204ENST00000490910 IGHV2-5P01817 119 aa9.98□□□□□ -0.81
CRNKL1-204ENST00000490910 CNN1P51911 297 aaKnown RBP9.98□□□□□ -0.81
CRNKL1-204ENST00000490910 SRSF4Q08170 494 aaKnown RBP9.98□□□□□ -0.81
CRNKL1-204ENST00000490910 JOSD1Q15040 202 aaPredicted RBP9.98□□□□□ -0.81
CRNKL1-204ENST00000490910 PHYHD1Q5SRE7 291 aa9.98□□□□□ -0.81
CRNKL1-204ENST00000490910 CCDC74BQ96LY2 380 aa9.98□□□□□ -0.81
CRNKL1-204ENST00000490910 GCM1Q9NP62 436 aa9.98□□□□□ -0.81
CRNKL1-204ENST00000490910 INSL6Q9Y581 213 aa9.98□□□□□ -0.81
CRNKL1-204ENST00000490910 ZNF816-ZNF321PA0A0X1KG74 233 aa9.98□□□□□ -0.81
CRNKL1-204ENST00000490910 LNP1A1A4G5 178 aa9.98□□□□□ -0.81
CRNKL1-204ENST00000490910 HSPB6O14558 160 aa9.98□□□□□ -0.81
CRNKL1-204ENST00000490910 ANGPTL7O43827 346 aa9.98□□□□□ -0.81
CRNKL1-204ENST00000490910 GJA4P35212 333 aa9.98□□□□□ -0.81
CRNKL1-204ENST00000490910 GNG10P50151 68 aa9.98□□□□□ -0.81
CRNKL1-204ENST00000490910 ERVFC1-1P60608 527 aa9.98□□□□□ -0.81
CRNKL1-204ENST00000490910 ROM1Q03395 351 aa9.98□□□□□ -0.81
CRNKL1-204ENST00000490910 C17orf67Q0P5P2 114 aa9.98□□□□□ -0.81
CRNKL1-204ENST00000490910 FAM69BQ5VUD6 431 aa9.98□□□□□ -0.81
CRNKL1-204ENST00000490910 FDX2Q6P4F2 183 aa9.98□□□□□ -0.81
CRNKL1-204ENST00000490910 Q6ZN92 141 aa9.98□□□□□ -0.81
CRNKL1-204ENST00000490910 MKXQ8IYA7 352 aa9.98□□□□□ -0.81
CRNKL1-204ENST00000490910 ZNF321PQ8N8H1 164 aa9.98□□□□□ -0.81
CRNKL1-204ENST00000490910 MRPL38Q96DV4 380 aaKnown RBP9.98□□□□□ -0.81
CRNKL1-204ENST00000490910 FAAP24Q9BTP7 215 aa9.98□□□□□ -0.81
CRNKL1-204ENST00000490910 ZNF552Q9H707 407 aaPredicted RBP9.98□□□□□ -0.81
CRNKL1-204ENST00000490910 PSENENQ9NZ42 101 aa9.98□□□□□ -0.81
CRNKL1-204ENST00000490910 C3orf85A0A1B0GTC6 90 aa9.98□□□□□ -0.81
CRNKL1-204ENST00000490910 F6UZH7 168 aa9.98□□□□□ -0.81
CRNKL1-204ENST00000490910 BCL2P10415 239 aa9.98□□□□□ -0.81
CRNKL1-204ENST00000490910 NTSR1P30989 418 aa9.98□□□□□ -0.81
CRNKL1-204ENST00000490910 PTGER4P35408 488 aa9.98□□□□□ -0.81
CRNKL1-204ENST00000490910 CCR2P41597 374 aa9.98□□□□□ -0.81
CRNKL1-204ENST00000490910 CARD18P57730 90 aa9.98□□□□□ -0.81
CRNKL1-204ENST00000490910 RPP30P78346 268 aaKnown RBP9.98□□□□□ -0.81
CRNKL1-204ENST00000490910 RUNX1Q01196 453 aa9.98□□□□□ -0.81
CRNKL1-204ENST00000490910 CD226Q15762 336 aa9.98□□□□□ -0.81
CRNKL1-204ENST00000490910 C16orf82Q7Z2V1 217 aa9.98□□□□□ -0.81
CRNKL1-204ENST00000490910 OR2I1PQ8NGU4 316 aa9.98□□□□□ -0.81
CRNKL1-204ENST00000490910 PP6455Q8WZ26 134 aa9.98□□□□□ -0.81
CRNKL1-204ENST00000490910 VSTM2LQ96N03 204 aa9.98□□□□□ -0.81
CRNKL1-204ENST00000490910 SLC2A9Q9NRM0 540 aa9.98□□□□□ -0.81
CRNKL1-204ENST00000490910 BET1LQ9NYM9 111 aa9.98□□□□□ -0.81
CRNKL1-204ENST00000490910 KIR2DS1A0A191URI9 304 aa9.97□□□□□ -0.81
CRNKL1-204ENST00000490910 HMGB3O15347 200 aaKnown RBP9.97□□□□□ -0.81
CRNKL1-204ENST00000490910 CDS2O95674 445 aa9.97□□□□□ -0.81
CRNKL1-204ENST00000490910 KIR2DS4P43632 304 aa9.97□□□□□ -0.81
CRNKL1-204ENST00000490910 GABRA4P48169 554 aa9.97□□□□□ -0.81
CRNKL1-204ENST00000490910 ADPRHP54922 357 aa9.97□□□□□ -0.81
CRNKL1-204ENST00000490910 CLDN17P56750 224 aa9.97□□□□□ -0.81
CRNKL1-204ENST00000490910 PMP22Q01453 160 aa9.97□□□□□ -0.81
CRNKL1-204ENST00000490910 KIR2DS1Q14954 304 aa9.97□□□□□ -0.81
CRNKL1-204ENST00000490910 BRICD5Q6PL45 260 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms