RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 TK1P04183 234 aa14.3□□□□□ -0.12
SEC13-218ENST00000490283 GABRB1P18505 474 aa14.3□□□□□ -0.12
SEC13-218ENST00000490283 ATF1P18846 271 aa14.3□□□□□ -0.12
SEC13-218ENST00000490283 SAA4P35542 130 aa14.3□□□□□ -0.12
SEC13-218ENST00000490283 IER3P46695 156 aa14.3□□□□□ -0.12
SEC13-218ENST00000490283 POU3F4P49335 361 aa14.3□□□□□ -0.12
SEC13-218ENST00000490283 MTCP1P56278 107 aa14.3□□□□□ -0.12
SEC13-218ENST00000490283 PRB3Q04118 309 aaPredicted RBP14.3□□□□□ -0.12
SEC13-218ENST00000490283 ALKBH1Q13686 389 aaKnown RBP14.3□□□□□ -0.12
SEC13-218ENST00000490283 KLHL22Q53GT1 634 aa14.3□□□□□ -0.12
SEC13-218ENST00000490283 GDPGP1Q6ZNW5 385 aa14.3□□□□□ -0.12
SEC13-218ENST00000490283 LHFPL2Q6ZUX7 228 aa14.3□□□□□ -0.12
SEC13-218ENST00000490283 LHFPL3Q86UP9 236 aa14.3□□□□□ -0.12
SEC13-218ENST00000490283 SYS1Q8N2H4 156 aa14.3□□□□□ -0.12
SEC13-218ENST00000490283 HAVCR2Q8TDQ0 301 aa14.3□□□□□ -0.12
SEC13-218ENST00000490283 EMG1Q92979 244 aaKnown RBP14.3□□□□□ -0.12
SEC13-218ENST00000490283 SPSB1Q96BD6 273 aa14.3□□□□□ -0.12
SEC13-218ENST00000490283 ADAT3Q96EY9 351 aaPredicted RBP14.3□□□□□ -0.12
SEC13-218ENST00000490283 PELI1Q96FA3 418 aa14.3□□□□□ -0.12
SEC13-218ENST00000490283 RDH12Q96NR8 316 aa14.3□□□□□ -0.12
SEC13-218ENST00000490283 COMMD4Q9H0A8 199 aa14.3□□□□□ -0.12
SEC13-218ENST00000490283 HEXA-AS1Q9H8Q6 139 aa14.3□□□□□ -0.12
SEC13-218ENST00000490283 SMPD3Q9NY59 655 aaPredicted RBP14.3□□□□□ -0.12
SEC13-218ENST00000490283 IGKV1-27A0A075B6S5 117 aa14.29□□□□□ -0.12
SEC13-218ENST00000490283 CCDC159P0C7I6 412 aa14.29□□□□□ -0.12
SEC13-218ENST00000490283 MDKP21741 143 aaPredicted RBP14.29□□□□□ -0.12
SEC13-218ENST00000490283 AZGP1P25311 298 aaKnown RBP14.29□□□□□ -0.12
SEC13-218ENST00000490283 DLX1P56177 255 aa14.29□□□□□ -0.12
SEC13-218ENST00000490283 NANOS3P60323 173 aaKnown RBP14.29□□□□□ -0.12
SEC13-218ENST00000490283 COL10A1Q03692 680 aa14.29□□□□□ -0.12
SEC13-218ENST00000490283 GDPD3Q7L5L3 318 aa14.29□□□□□ -0.12
SEC13-218ENST00000490283 OR4M1Q8NGD0 313 aa14.29□□□□□ -0.12
SEC13-218ENST00000490283 TNFRSF14Q92956 283 aa14.29□□□□□ -0.12
SEC13-218ENST00000490283 AMBNQ9NP70 447 aa14.29□□□□□ -0.12
SEC13-218ENST00000490283 MTCH1Q9NZJ7 389 aa14.29□□□□□ -0.12
SEC13-218ENST00000490283 ZNRD1Q9P1U0 126 aa14.29□□□□□ -0.12
SEC13-218ENST00000490283 GLS2Q9UI32 602 aa14.29□□□□□ -0.12
SEC13-218ENST00000490283 MMP24Q9Y5R2 645 aa14.29□□□□□ -0.12
SEC13-218ENST00000490283 TMEM212A6NML5 194 aa14.28□□□□□ -0.12
SEC13-218ENST00000490283 K7N7A8 449 aa14.28□□□□□ -0.12
SEC13-218ENST00000490283 GPR137BO60478 399 aa14.28□□□□□ -0.12
SEC13-218ENST00000490283 NDUFA7O95182 113 aa14.28□□□□□ -0.12
SEC13-218ENST00000490283 IGHA1P01876 353 aa14.28□□□□□ -0.12
SEC13-218ENST00000490283 GBX2P52951 348 aaPredicted RBP14.28□□□□□ -0.12
SEC13-218ENST00000490283 EDDM3BP56851 147 aa14.28□□□□□ -0.12
SEC13-218ENST00000490283 ERVFRD-1P60508 538 aa14.28□□□□□ -0.12
SEC13-218ENST00000490283 MIDNQ504T8 468 aa14.28□□□□□ -0.12
SEC13-218ENST00000490283 TMEM200BQ69YZ2 307 aa14.28□□□□□ -0.12
SEC13-218ENST00000490283 C17orf107Q6ZR85 190 aa14.28□□□□□ -0.12
SEC13-218ENST00000490283 ZSCAN4Q8NAM6 433 aaPredicted RBP14.28□□□□□ -0.12
SEC13-218ENST00000490283 OR5R1Q8NH85 324 aa14.28□□□□□ -0.12
SEC13-218ENST00000490283 RNF166Q96A37 237 aaPredicted RBP14.28□□□□□ -0.12
SEC13-218ENST00000490283 OPALINQ96PE5 141 aa14.28□□□□□ -0.12
SEC13-218ENST00000490283 SLITRK2Q9H156 845 aa14.28□□□□□ -0.12
SEC13-218ENST00000490283 C8orf4Q9NR00 106 aa14.28□□□□□ -0.12
SEC13-218ENST00000490283 ERVK13-1Q9NX77 482 aa14.28□□□□□ -0.12
SEC13-218ENST00000490283 C1RLQ9NZP8 487 aa14.28□□□□□ -0.12
SEC13-218ENST00000490283 MYRFQ9Y2G1 1151 aa14.28□□□□□ -0.12
SEC13-218ENST00000490283 PCDHGB5Q9Y5G0 923 aa14.28□□□□□ -0.12
SEC13-218ENST00000490283 IRGMA1A4Y4 181 aa14.27□□□□□ -0.13
SEC13-218ENST00000490283 OR4C45A6NMZ5 311 aa14.27□□□□□ -0.13
SEC13-218ENST00000490283 PIPP12273 146 aaPredicted RBP14.27□□□□□ -0.13
SEC13-218ENST00000490283 LGALS4P56470 323 aa14.27□□□□□ -0.13
SEC13-218ENST00000490283 PNKDQ8N490 385 aa14.27□□□□□ -0.13
SEC13-218ENST00000490283 OR52I1Q8NGK6 324 aa14.27□□□□□ -0.13
SEC13-218ENST00000490283 OR13C9Q8NGT0 318 aa14.27□□□□□ -0.13
SEC13-218ENST00000490283 TAF15Q92804 592 aaKnown RBP eCLIP14.27□□□□□ -0.13
SEC13-218ENST00000490283 VPREB3Q9UKI3 123 aa14.27□□□□□ -0.13
SEC13-218ENST00000490283 IGKV1-9A0A0C4DH69 117 aa14.26□□□□□ -0.13
SEC13-218ENST00000490283 TRBV2A0A0J9YWF9 115 aa14.26□□□□□ -0.13
SEC13-218ENST00000490283 SPRY1O43609 319 aaPredicted RBP14.26□□□□□ -0.13
SEC13-218ENST00000490283 HAND1O96004 215 aa14.26□□□□□ -0.13
SEC13-218ENST00000490283 PRKACAP17612 351 aa14.26□□□□□ -0.13
SEC13-218ENST00000490283 GABRR1P24046 479 aa14.26□□□□□ -0.13
SEC13-218ENST00000490283 PEX2P28328 305 aa14.26□□□□□ -0.13
SEC13-218ENST00000490283 SPIN3Q5JUX0 258 aa14.26□□□□□ -0.13
SEC13-218ENST00000490283 LPCAT4Q643R3 524 aa14.26□□□□□ -0.13
SEC13-218ENST00000490283 OLFML2AQ68BL7 652 aa14.26□□□□□ -0.13
SEC13-218ENST00000490283 DHRS7BQ6IAN0 325 aaPredicted RBP14.26□□□□□ -0.13
SEC13-218ENST00000490283 OR8H2Q8N162 312 aa14.26□□□□□ -0.13
SEC13-218ENST00000490283 FAM58AQ8N1B3 248 aa14.26□□□□□ -0.13
SEC13-218ENST00000490283 OR51A4Q8NGJ6 313 aa14.26□□□□□ -0.13
SEC13-218ENST00000490283 OR5D14Q8NGL3 314 aa14.26□□□□□ -0.13
SEC13-218ENST00000490283 OR5AK2Q8NH90 309 aa14.26□□□□□ -0.13
SEC13-218ENST00000490283 PPP1R35Q8TAP8 253 aa14.26□□□□□ -0.13
SEC13-218ENST00000490283 TSEN15Q8WW01 171 aaKnown RBP14.26□□□□□ -0.13
SEC13-218ENST00000490283 CPNE2Q96FN4 548 aaPredicted RBP14.26□□□□□ -0.13
SEC13-218ENST00000490283 SNX22Q96L94 193 aa14.26□□□□□ -0.13
SEC13-218ENST00000490283 ZCCHC4Q9H5U6 513 aa14.26□□□□□ -0.13
SEC13-218ENST00000490283 ISG20L2Q9H9L3 353 aaKnown RBP14.26□□□□□ -0.13
SEC13-218ENST00000490283 MRPS18AQ9NVS2 196 aaKnown RBP14.26□□□□□ -0.13
SEC13-218ENST00000490283 DHDHQ9UQ10 334 aa14.26□□□□□ -0.13
SEC13-218ENST00000490283 TENM1Q9UKZ4 2725 aa14.26□□□□□ -0.13
SEC13-218ENST00000490283 CLPSL1A2RUU4 121 aa14.25□□□□□ -0.13
SEC13-218ENST00000490283 F8VVB4 439 aa14.25□□□□□ -0.13
SEC13-218ENST00000490283 F8VWA3 439 aa14.25□□□□□ -0.13
SEC13-218ENST00000490283 MT-ND2P03891 347 aa14.25□□□□□ -0.13
SEC13-218ENST00000490283 HCKP08631 526 aa14.25□□□□□ -0.13
SEC13-218ENST00000490283 CCL3L1P16619 93 aa14.25□□□□□ -0.13
SEC13-218ENST00000490283 BCL3P20749 454 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms