RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 TRRAPQ9Y4A5 3859 aa11.43□□□□□ -0.58
VTI1A-206ENST00000489142 POM121CA8CG34 1229 aa11.43□□□□□ -0.58
VTI1A-206ENST00000489142 NDUFA7O95182 113 aa11.43□□□□□ -0.58
VTI1A-206ENST00000489142 SERPINA3P01011 423 aa11.43□□□□□ -0.58
VTI1A-206ENST00000489142 AZGP1P25311 298 aaKnown RBP11.43□□□□□ -0.58
VTI1A-206ENST00000489142 DUSP1P28562 367 aa11.43□□□□□ -0.58
VTI1A-206ENST00000489142 EDDM3BP56851 147 aa11.43□□□□□ -0.58
VTI1A-206ENST00000489142 EDDM3AQ14507 147 aa11.43□□□□□ -0.58
VTI1A-206ENST00000489142 TMEM244Q5VVB8 128 aa11.43□□□□□ -0.58
VTI1A-206ENST00000489142 OLFML2AQ68BL7 652 aa11.43□□□□□ -0.58
VTI1A-206ENST00000489142 C1orf122Q6ZSJ8 110 aa11.43□□□□□ -0.58
VTI1A-206ENST00000489142 EGFL6Q8IUX8 553 aa11.43□□□□□ -0.58
VTI1A-206ENST00000489142 C11orf42Q8N5U0 333 aa11.43□□□□□ -0.58
VTI1A-206ENST00000489142 OR5D13Q8NGL4 314 aa11.43□□□□□ -0.58
VTI1A-206ENST00000489142 OR13C3Q8NGS6 347 aa11.43□□□□□ -0.58
VTI1A-206ENST00000489142 EMG1Q92979 244 aaKnown RBP11.43□□□□□ -0.58
VTI1A-206ENST00000489142 BEX1Q9HBH7 125 aa11.43□□□□□ -0.58
VTI1A-206ENST00000489142 FAM118AQ9NWS6 357 aa11.43□□□□□ -0.58
VTI1A-206ENST00000489142 VPREB3Q9UKI3 123 aa11.43□□□□□ -0.58
VTI1A-206ENST00000489142 CAB39Q9Y376 341 aaPredicted RBP11.43□□□□□ -0.58
VTI1A-206ENST00000489142 MMP24Q9Y5R2 645 aa11.43□□□□□ -0.58
VTI1A-206ENST00000489142 LOC100130705A0A1B0GUX0 176 aa11.42□□□□□ -0.58
VTI1A-206ENST00000489142 TMEM82A0PJX8 343 aa11.42□□□□□ -0.58
VTI1A-206ENST00000489142 BTBD17A6NE02 478 aa11.42□□□□□ -0.58
VTI1A-206ENST00000489142 OR4C45A6NMZ5 311 aa11.42□□□□□ -0.58
VTI1A-206ENST00000489142 E9PI62 339 aa11.42□□□□□ -0.58
VTI1A-206ENST00000489142 K7N7A8 449 aa11.42□□□□□ -0.58
VTI1A-206ENST00000489142 IGHA1P01876 353 aa11.42□□□□□ -0.58
VTI1A-206ENST00000489142 ATF1P18846 271 aa11.42□□□□□ -0.58
VTI1A-206ENST00000489142 RBP2P50120 134 aa11.42□□□□□ -0.58
VTI1A-206ENST00000489142 MTCP1P56278 107 aa11.42□□□□□ -0.58
VTI1A-206ENST00000489142 KRTAP10-3P60369 221 aa11.42□□□□□ -0.58
VTI1A-206ENST00000489142 LY6EQ16553 131 aa11.42□□□□□ -0.58
VTI1A-206ENST00000489142 SMN1Q16637 294 aaKnown RBP11.42□□□□□ -0.58
VTI1A-206ENST00000489142 PRR31Q5SQ13 230 aa11.42□□□□□ -0.58
VTI1A-206ENST00000489142 DHRS7BQ6IAN0 325 aaPredicted RBP11.42□□□□□ -0.58
VTI1A-206ENST00000489142 FDX2Q6P4F2 183 aa11.42□□□□□ -0.58
VTI1A-206ENST00000489142 C17orf107Q6ZR85 190 aa11.42□□□□□ -0.58
VTI1A-206ENST00000489142 KCTD20Q7Z5Y7 419 aa11.42□□□□□ -0.58
VTI1A-206ENST00000489142 ZNF676Q8N7Q3 588 aa11.42□□□□□ -0.58
VTI1A-206ENST00000489142 TPRX1Q8N7U7 411 aa11.42□□□□□ -0.58
VTI1A-206ENST00000489142 CCDC54Q8NEL0 328 aa11.42□□□□□ -0.58
VTI1A-206ENST00000489142 OR5D18Q8NGL1 313 aa11.42□□□□□ -0.58
VTI1A-206ENST00000489142 OR13C9Q8NGT0 318 aa11.42□□□□□ -0.58
VTI1A-206ENST00000489142 RHOXF1Q8NHV9 184 aa11.42□□□□□ -0.58
VTI1A-206ENST00000489142 APH1BQ8WW43 257 aa11.42□□□□□ -0.58
VTI1A-206ENST00000489142 PP6455Q8WZ26 134 aa11.42□□□□□ -0.58
VTI1A-206ENST00000489142 AJUBAQ96IF1 538 aa11.42□□□□□ -0.58
VTI1A-206ENST00000489142 CHST6Q9GZX3 395 aa11.42□□□□□ -0.58
VTI1A-206ENST00000489142 SF3B6Q9Y3B4 125 aaKnown RBP11.42□□□□□ -0.58
VTI1A-206ENST00000489142 MGAM2Q2M2H8 2515 aa11.42□□□□□ -0.58
VTI1A-206ENST00000489142 CLPSL1A2RUU4 121 aa11.41□□□□□ -0.58
VTI1A-206ENST00000489142 SNTNA6NMZ2 147 aa11.41□□□□□ -0.58
VTI1A-206ENST00000489142 H3BUX3 64 aa11.41□□□□□ -0.58
VTI1A-206ENST00000489142 ZNF737O75373 536 aa11.41□□□□□ -0.58
VTI1A-206ENST00000489142 HAND1O96004 215 aa11.41□□□□□ -0.58
VTI1A-206ENST00000489142 ISG15P05161 165 aa11.41□□□□□ -0.58
VTI1A-206ENST00000489142 CHRM2P08172 466 aa11.41□□□□□ -0.58
VTI1A-206ENST00000489142 ATP1B3P54709 279 aa11.41□□□□□ -0.58
VTI1A-206ENST00000489142 ACTA2P62736 377 aa11.41□□□□□ -0.58
VTI1A-206ENST00000489142 ACTG2P63267 376 aa11.41□□□□□ -0.58
VTI1A-206ENST00000489142 ACSM1Q08AH1 577 aa11.41□□□□□ -0.58
VTI1A-206ENST00000489142 ALKBH1Q13686 389 aaKnown RBP11.41□□□□□ -0.58
VTI1A-206ENST00000489142 GALEQ14376 348 aa11.41□□□□□ -0.58
VTI1A-206ENST00000489142 PLA1AQ53H76 456 aa11.41□□□□□ -0.58
VTI1A-206ENST00000489142 BRICD5Q6PL45 260 aa11.41□□□□□ -0.58
VTI1A-206ENST00000489142 Q6ZSV7 163 aa11.41□□□□□ -0.58
VTI1A-206ENST00000489142 TCF23Q7RTU1 214 aa11.41□□□□□ -0.58
VTI1A-206ENST00000489142 C10orf67Q8IYJ2 551 aa11.41□□□□□ -0.58
VTI1A-206ENST00000489142 OR52I1Q8NGK6 324 aa11.41□□□□□ -0.58
VTI1A-206ENST00000489142 LINC01006Q8NI28 216 aa11.41□□□□□ -0.58
VTI1A-206ENST00000489142 C10orf35Q96D05 121 aa11.41□□□□□ -0.58
VTI1A-206ENST00000489142 OPALINQ96PE5 141 aa11.41□□□□□ -0.58
VTI1A-206ENST00000489142 FAM234AQ9H0X4 552 aa11.41□□□□□ -0.58
VTI1A-206ENST00000489142 SLITRK2Q9H156 845 aa11.41□□□□□ -0.58
VTI1A-206ENST00000489142 PPA2Q9H2U2 334 aa11.41□□□□□ -0.58
VTI1A-206ENST00000489142 ERVK13-1Q9NX77 482 aa11.41□□□□□ -0.58
VTI1A-206ENST00000489142 HHLA2Q9UM44 414 aa11.41□□□□□ -0.58
VTI1A-206ENST00000489142 RNF114Q9Y508 228 aa11.41□□□□□ -0.58
VTI1A-206ENST00000489142 IGKV1-12A0A0C4DH73 117 aa11.4□□□□□ -0.58
VTI1A-206ENST00000489142 A0A1W2PPH5 198 aa11.4□□□□□ -0.58
VTI1A-206ENST00000489142 CLIC3O95833 236 aa11.4□□□□□ -0.58
VTI1A-206ENST00000489142 IGKV1D-12P01611 117 aa11.4□□□□□ -0.58
VTI1A-206ENST00000489142 OCM2P0CE71 109 aa11.4□□□□□ -0.58
VTI1A-206ENST00000489142 OCMP0CE72 109 aaPredicted RBP11.4□□□□□ -0.58
VTI1A-206ENST00000489142 PRKACAP17612 351 aa11.4□□□□□ -0.58
VTI1A-206ENST00000489142 GABRR1P24046 479 aa11.4□□□□□ -0.58
VTI1A-206ENST00000489142 CCR9P51686 369 aa11.4□□□□□ -0.58
VTI1A-206ENST00000489142 DLX6P56179 175 aa11.4□□□□□ -0.58
VTI1A-206ENST00000489142 LRRC36Q1X8D7 754 aa11.4□□□□□ -0.58
VTI1A-206ENST00000489142 GDPGP1Q6ZNW5 385 aa11.4□□□□□ -0.58
VTI1A-206ENST00000489142 LHFPL2Q6ZUX7 228 aa11.4□□□□□ -0.58
VTI1A-206ENST00000489142 UTS2BQ765I0 119 aa11.4□□□□□ -0.58
VTI1A-206ENST00000489142 GDPD3Q7L5L3 318 aa11.4□□□□□ -0.58
VTI1A-206ENST00000489142 LHFPL4Q7Z7J7 247 aa11.4□□□□□ -0.58
VTI1A-206ENST00000489142 OR8H2Q8N162 312 aa11.4□□□□□ -0.58
VTI1A-206ENST00000489142 BEND2Q8NDZ0 799 aa11.4□□□□□ -0.58
VTI1A-206ENST00000489142 DNAAF1Q8NEP3 725 aa11.4□□□□□ -0.58
VTI1A-206ENST00000489142 OR52N4Q8NGI2 321 aa11.4□□□□□ -0.58
VTI1A-206ENST00000489142 SSX3Q99909 188 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms