RNA–Protein interactions for RNA: ENST00000488937.1

PRPF4-203, Transcript of pre-mRNA processing factor 4, humanhuman

TSL 3

Gene PRPF4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-203ENST00000488937 RAB3AP20336 220 aa2.52□□□□□ -2.01
PRPF4-203ENST00000488937 TDGF1P3P51864 188 aa2.52□□□□□ -2.01
PRPF4-203ENST00000488937 TCL1AP56279 114 aa2.52□□□□□ -2.01
PRPF4-203ENST00000488937 VSX2P58304 361 aaPredicted RBP2.52□□□□□ -2.01
PRPF4-203ENST00000488937 CXCL6P80162 114 aa2.52□□□□□ -2.01
PRPF4-203ENST00000488937 PPP1R1AQ13522 171 aa2.52□□□□□ -2.01
PRPF4-203ENST00000488937 RUNX3Q13761 415 aa2.52□□□□□ -2.01
PRPF4-203ENST00000488937 CLEC12AQ5QGZ9 265 aa2.52□□□□□ -2.01
PRPF4-203ENST00000488937 TSPO2Q5TGU0 170 aa2.52□□□□□ -2.01
PRPF4-203ENST00000488937 SFXN4Q6P4A7 337 aa2.52□□□□□ -2.01
PRPF4-203ENST00000488937 XKRXQ6PP77 449 aa2.52□□□□□ -2.01
PRPF4-203ENST00000488937 PAMR1Q6UXH9 720 aa2.52□□□□□ -2.01
PRPF4-203ENST00000488937 H2AFVQ71UI9 128 aa2.52□□□□□ -2.01
PRPF4-203ENST00000488937 SLC36A1Q7Z2H8 476 aa2.52□□□□□ -2.01
PRPF4-203ENST00000488937 SMIM15Q7Z3B0 74 aa2.52□□□□□ -2.01
PRPF4-203ENST00000488937 TMED4Q7Z7H5 227 aa2.52□□□□□ -2.01
PRPF4-203ENST00000488937 TMEM61Q8N0U2 210 aa2.52□□□□□ -2.01
PRPF4-203ENST00000488937 MUC15Q8N387 334 aa2.52□□□□□ -2.01
PRPF4-203ENST00000488937 CADM2Q8N3J6 435 aa2.52□□□□□ -2.01
PRPF4-203ENST00000488937 CLDN22Q8N7P3 220 aa2.52□□□□□ -2.01
PRPF4-203ENST00000488937 OR11H7Q8NGC8 314 aa2.52□□□□□ -2.01
PRPF4-203ENST00000488937 OR51D1Q8NGF3 324 aa2.52□□□□□ -2.01
PRPF4-203ENST00000488937 OR10G9Q8NGN4 311 aa2.52□□□□□ -2.01
PRPF4-203ENST00000488937 OR11L1Q8NGX0 322 aa2.52□□□□□ -2.01
PRPF4-203ENST00000488937 ACTRT1Q8TDG2 376 aa2.52□□□□□ -2.01
PRPF4-203ENST00000488937 SLC37A2Q8TED4 501 aa2.52□□□□□ -2.01
PRPF4-203ENST00000488937 LRRC29Q8WV35 223 aa2.52□□□□□ -2.01
PRPF4-203ENST00000488937 PYDC1Q8WXC3 89 aa2.52□□□□□ -2.01
PRPF4-203ENST00000488937 DCPSQ96C86 337 aaKnown RBP2.52□□□□□ -2.01
PRPF4-203ENST00000488937 ZNF689Q96CS4 500 aaPredicted RBP2.52□□□□□ -2.01
PRPF4-203ENST00000488937 DUX3Q96PT4 197 aa2.52□□□□□ -2.01
PRPF4-203ENST00000488937 OR5M11Q96RB7 305 aa2.52□□□□□ -2.01
PRPF4-203ENST00000488937 PLEKHF1Q96S99 279 aa2.52□□□□□ -2.01
PRPF4-203ENST00000488937 HOPXQ9BPY8 73 aaPredicted RBP2.52□□□□□ -2.01
PRPF4-203ENST00000488937 TMEM109Q9BVC6 243 aa2.52□□□□□ -2.01
PRPF4-203ENST00000488937 TAPBPLQ9BX59 468 aa2.52□□□□□ -2.01
PRPF4-203ENST00000488937 FBXL15Q9H469 300 aa2.52□□□□□ -2.01
PRPF4-203ENST00000488937 DIABLOQ9NR28 239 aa2.52□□□□□ -2.01
PRPF4-203ENST00000488937 HEBP1Q9NRV9 189 aa2.52□□□□□ -2.01
PRPF4-203ENST00000488937 INIPQ9NRY2 104 aa2.52□□□□□ -2.01
PRPF4-203ENST00000488937 TMEM100Q9NV29 134 aa2.52□□□□□ -2.01
PRPF4-203ENST00000488937 RBFOX1Q9NWB1 397 aaKnown RBP2.52□□□□□ -2.01
PRPF4-203ENST00000488937 VPS29Q9UBQ0 182 aa2.52□□□□□ -2.01
PRPF4-203ENST00000488937 ORC6Q9Y5N6 252 aa2.52□□□□□ -2.01
PRPF4-203ENST00000488937 CPDO75976 1380 aa2.51□□□□□ -2.01
PRPF4-203ENST00000488937 PALLDQ8WX93 1383 aa2.51□□□□□ -2.01
PRPF4-203ENST00000488937 CLUHO75153 1309 aa2.51□□□□□ -2.01
PRPF4-203ENST00000488937 TGIF2-C20orf24A0A0A6YYL0 155 aa2.51□□□□□ -2.01
PRPF4-203ENST00000488937 TRAV8-6A0A0B4J262 113 aa2.51□□□□□ -2.01
PRPF4-203ENST00000488937 IGKV1-8A0A0C4DH67 115 aa2.51□□□□□ -2.01
PRPF4-203ENST00000488937 BTNL10A8MVZ5 291 aa2.51□□□□□ -2.01
PRPF4-203ENST00000488937 ZNF878C9JN71 531 aa2.51□□□□□ -2.01
PRPF4-203ENST00000488937 UPK1AO00322 258 aa2.51□□□□□ -2.01
PRPF4-203ENST00000488937 PEX7O00628 323 aa2.51□□□□□ -2.01
PRPF4-203ENST00000488937 SPAG7O75391 227 aa2.51□□□□□ -2.01
PRPF4-203ENST00000488937 RDH16O75452 317 aa2.51□□□□□ -2.01
PRPF4-203ENST00000488937 GCM2O75603 506 aaPredicted RBP2.51□□□□□ -2.01
PRPF4-203ENST00000488937 REM1O75628 298 aa2.51□□□□□ -2.01
PRPF4-203ENST00000488937 OR2B3O76000 313 aa2.51□□□□□ -2.01
PRPF4-203ENST00000488937 IGLV1-44P01699 117 aa2.51□□□□□ -2.01
PRPF4-203ENST00000488937 IGHV3-23P01764 117 aa2.51□□□□□ -2.01
PRPF4-203ENST00000488937 SNRPAP09012 282 aaKnown RBP2.51□□□□□ -2.01
PRPF4-203ENST00000488937 ICAM2P13598 275 aa2.51□□□□□ -2.01
PRPF4-203ENST00000488937 KCNE1P15382 129 aa2.51□□□□□ -2.01
PRPF4-203ENST00000488937 M6PRP20645 277 aa2.51□□□□□ -2.01
PRPF4-203ENST00000488937 PSMB9P28065 219 aa2.51□□□□□ -2.01
PRPF4-203ENST00000488937 GABRA4P48169 554 aa2.51□□□□□ -2.01
PRPF4-203ENST00000488937 P2RX1P51575 399 aa2.51□□□□□ -2.01
PRPF4-203ENST00000488937 SYNJ2BPP57105 145 aa2.51□□□□□ -2.01
PRPF4-203ENST00000488937 RAB5BP61020 215 aa2.51□□□□□ -2.01
PRPF4-203ENST00000488937 PSME3P61289 254 aa2.51□□□□□ -2.01
PRPF4-203ENST00000488937 ARG2P78540 354 aa2.51□□□□□ -2.01
PRPF4-203ENST00000488937 REG3AQ06141 175 aa2.51□□□□□ -2.01
PRPF4-203ENST00000488937 TNFRSF9Q07011 255 aa2.51□□□□□ -2.01
PRPF4-203ENST00000488937 SKP2Q13309 424 aa2.51□□□□□ -2.01
PRPF4-203ENST00000488937 EDDM3AQ14507 147 aa2.51□□□□□ -2.01
PRPF4-203ENST00000488937 ZNF235Q14590 738 aa2.51□□□□□ -2.01
PRPF4-203ENST00000488937 SPA17Q15506 151 aa2.51□□□□□ -2.01
PRPF4-203ENST00000488937 MAPK14Q16539 360 aa2.51□□□□□ -2.01
PRPF4-203ENST00000488937 KRTAP13-3Q3SY46 172 aa2.51□□□□□ -2.01
PRPF4-203ENST00000488937 TMEM97Q5BJF2 176 aa2.51□□□□□ -2.01
PRPF4-203ENST00000488937 TMEM255AQ5JRV8 349 aa2.51□□□□□ -2.01
PRPF4-203ENST00000488937 ZNF493Q6ZR52 646 aa2.51□□□□□ -2.01
PRPF4-203ENST00000488937 SLC51BQ86UW2 128 aa2.51□□□□□ -2.01
PRPF4-203ENST00000488937 PHF13Q86YI8 300 aaPredicted RBP2.51□□□□□ -2.01
PRPF4-203ENST00000488937 C11orf53Q8IXP5 236 aa2.51□□□□□ -2.01
PRPF4-203ENST00000488937 TMEM86BQ8N661 226 aa2.51□□□□□ -2.01
PRPF4-203ENST00000488937 LINC00337Q8N6G1 96 aa2.51□□□□□ -2.01
PRPF4-203ENST00000488937 ZNF676Q8N7Q3 588 aa2.51□□□□□ -2.01
PRPF4-203ENST00000488937 COX18Q8N8Q8 333 aa2.51□□□□□ -2.01
PRPF4-203ENST00000488937 UBAC2Q8NBM4 344 aa2.51□□□□□ -2.01
PRPF4-203ENST00000488937 GPR26Q8NDV2 337 aa2.51□□□□□ -2.01
PRPF4-203ENST00000488937 OR4P4Q8NGL7 312 aa2.51□□□□□ -2.01
PRPF4-203ENST00000488937 C7orf33Q8WU49 177 aa2.51□□□□□ -2.01
PRPF4-203ENST00000488937 ASB17Q8WXJ9 295 aa2.51□□□□□ -2.01
PRPF4-203ENST00000488937 CCL17Q92583 94 aa2.51□□□□□ -2.01
PRPF4-203ENST00000488937 YIPF5Q969M3 257 aa2.51□□□□□ -2.01
PRPF4-203ENST00000488937 FAM104AQ969W3 186 aa2.51□□□□□ -2.01
PRPF4-203ENST00000488937 MARC2Q969Z3 335 aa2.51□□□□□ -2.01
PRPF4-203ENST00000488937 RERGQ96A58 199 aaPredicted RBP2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms