RNA–Protein interactions for RNA: ENST00000487711.5

TTC3-220, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-220ENST00000487711 TFGQ92734 400 aaPredicted RBP2.11□□□□□ -2.07
TTC3-220ENST00000487711 RPEQ96AT9 228 aa2.11□□□□□ -2.07
TTC3-220ENST00000487711 APH1AQ96BI3 265 aa2.11□□□□□ -2.07
TTC3-220ENST00000487711 ZNF681Q96N22 645 aa2.11□□□□□ -2.07
TTC3-220ENST00000487711 SERPINB12Q96P63 405 aa2.11□□□□□ -2.07
TTC3-220ENST00000487711 ZNF317Q96PQ6 595 aaPredicted RBP2.11□□□□□ -2.07
TTC3-220ENST00000487711 NAA50Q9GZZ1 169 aaKnown RBP2.11□□□□□ -2.07
TTC3-220ENST00000487711 TMEM38AQ9H6F2 299 aa2.11□□□□□ -2.07
TTC3-220ENST00000487711 UBE2ZQ9H832 354 aaPredicted RBP2.11□□□□□ -2.07
TTC3-220ENST00000487711 AGPAT4Q9NRZ5 378 aa2.11□□□□□ -2.07
TTC3-220ENST00000487711 IL20Q9NYY1 176 aa2.11□□□□□ -2.07
TTC3-220ENST00000487711 ZNF229Q9UJW7 825 aa2.11□□□□□ -2.07
TTC3-220ENST00000487711 POFUT2Q9Y2G5 429 aa2.11□□□□□ -2.07
TTC3-220ENST00000487711 SBDSQ9Y3A5 250 aaKnown RBP eCLIP2.11□□□□□ -2.07
TTC3-220ENST00000487711 UBIAD1Q9Y5Z9 338 aa2.11□□□□□ -2.07
TTC3-220ENST00000487711 PHIPQ8WWQ0 1821 aa2.11□□□□□ -2.07
TTC3-220ENST00000487711 RALGAPA2Q2PPJ7 1873 aa2.11□□□□□ -2.07
TTC3-220ENST00000487711 LRRC37A2A6NM11 1700 aa2.11□□□□□ -2.07
TTC3-220ENST00000487711 DICER1Q9UPY3 1922 aaKnown RBP2.11□□□□□ -2.07
TTC3-220ENST00000487711 MYH9P35579 1960 aaKnown RBP2.1□□□□□ -2.07
TTC3-220ENST00000487711 SRCAPQ6ZRS2 3230 aa2.1□□□□□ -2.07
TTC3-220ENST00000487711 IGLV3-12A0A075B6K2 115 aa2.1□□□□□ -2.07
TTC3-220ENST00000487711 RAB19A4D1S5 217 aa2.1□□□□□ -2.07
TTC3-220ENST00000487711 GMNCA6NCL1 334 aa2.1□□□□□ -2.07
TTC3-220ENST00000487711 A6NDN8 102 aa2.1□□□□□ -2.07
TTC3-220ENST00000487711 VGLL3A8MV65 326 aa2.1□□□□□ -2.07
TTC3-220ENST00000487711 SMKR1H3BMG3 65 aa2.1□□□□□ -2.07
TTC3-220ENST00000487711 H3BN98 237 aa2.1□□□□□ -2.07
TTC3-220ENST00000487711 LIN7AO14910 233 aaPredicted RBP2.1□□□□□ -2.07
TTC3-220ENST00000487711 RAD51CO43502 376 aa2.1□□□□□ -2.07
TTC3-220ENST00000487711 ZNF207O43670 478 aaKnown RBP2.1□□□□□ -2.07
TTC3-220ENST00000487711 SLC19A2O60779 497 aa2.1□□□□□ -2.07
TTC3-220ENST00000487711 SCN2BO60939 215 aa2.1□□□□□ -2.07
TTC3-220ENST00000487711 CCNKO75909 580 aa2.1□□□□□ -2.07
TTC3-220ENST00000487711 CDK14O94921 469 aa2.1□□□□□ -2.07
TTC3-220ENST00000487711 CALB1P05937 261 aa2.1□□□□□ -2.07
TTC3-220ENST00000487711 KRT16P08779 473 aa2.1□□□□□ -2.07
TTC3-220ENST00000487711 HTR2CP28335 458 aa2.1□□□□□ -2.07
TTC3-220ENST00000487711 IL12BP29460 328 aa2.1□□□□□ -2.07
TTC3-220ENST00000487711 RFC3P40938 356 aa2.1□□□□□ -2.07
TTC3-220ENST00000487711 CLDN6P56747 220 aa2.1□□□□□ -2.07
TTC3-220ENST00000487711 RWDD2BP57060 319 aa2.1□□□□□ -2.07
TTC3-220ENST00000487711 TAS2R39P59534 338 aa2.1□□□□□ -2.07
TTC3-220ENST00000487711 GNGT1P63211 74 aa2.1□□□□□ -2.07
TTC3-220ENST00000487711 ACTG2P63267 376 aa2.1□□□□□ -2.07
TTC3-220ENST00000487711 PITPNAQ00169 270 aa2.1□□□□□ -2.07
TTC3-220ENST00000487711 TWF1Q12792 350 aa2.1□□□□□ -2.07
TTC3-220ENST00000487711 ZNF726P1Q15940 193 aa2.1□□□□□ -2.07
TTC3-220ENST00000487711 GABRA6Q16445 453 aa2.1□□□□□ -2.07
TTC3-220ENST00000487711 THEM4Q5T1C6 240 aa2.1□□□□□ -2.07
TTC3-220ENST00000487711 ZNF470Q6ECI4 717 aa2.1□□□□□ -2.07
TTC3-220ENST00000487711 C4orf22Q6V702 233 aa2.1□□□□□ -2.07
TTC3-220ENST00000487711 TMEM150AQ86TG1 271 aa2.1□□□□□ -2.07
TTC3-220ENST00000487711 PHF13Q86YI8 300 aaPredicted RBP2.1□□□□□ -2.07
TTC3-220ENST00000487711 SLC13A5Q86YT5 568 aaPredicted RBP2.1□□□□□ -2.07
TTC3-220ENST00000487711 CALHM1Q8IU99 346 aa2.1□□□□□ -2.07
TTC3-220ENST00000487711 CBLN2Q8IUK8 224 aa2.1□□□□□ -2.07
TTC3-220ENST00000487711 KIF2BQ8N4N8 673 aa2.1□□□□□ -2.07
TTC3-220ENST00000487711 METTL13Q8N6R0 699 aa2.1□□□□□ -2.07
TTC3-220ENST00000487711 OR51F2Q8NH61 342 aa2.1□□□□□ -2.07
TTC3-220ENST00000487711 COQ8AQ8NI60 647 aa2.1□□□□□ -2.07
TTC3-220ENST00000487711 LGALS14Q8TCE9 139 aa2.1□□□□□ -2.07
TTC3-220ENST00000487711 NEURL3Q96EH8 262 aa2.1□□□□□ -2.07
TTC3-220ENST00000487711 CHMP6Q96FZ7 201 aa2.1□□□□□ -2.07
TTC3-220ENST00000487711 NARS2Q96I59 477 aaKnown RBP2.1□□□□□ -2.07
TTC3-220ENST00000487711 ARL5BQ96KC2 179 aa2.1□□□□□ -2.07
TTC3-220ENST00000487711 CAPZA3Q96KX2 299 aa2.1□□□□□ -2.07
TTC3-220ENST00000487711 COL21A1Q96P44 957 aa2.1□□□□□ -2.07
TTC3-220ENST00000487711 LXNQ9BS40 222 aa2.1□□□□□ -2.07
TTC3-220ENST00000487711 BBS2Q9BXC9 721 aa2.1□□□□□ -2.07
TTC3-220ENST00000487711 SYT4Q9H2B2 425 aa2.1□□□□□ -2.07
TTC3-220ENST00000487711 BEX1Q9HBH7 125 aa2.1□□□□□ -2.07
TTC3-220ENST00000487711 SLC38A10Q9HBR0 1119 aa2.1□□□□□ -2.07
TTC3-220ENST00000487711 KCNJ16Q9NPI9 418 aa2.1□□□□□ -2.07
TTC3-220ENST00000487711 BATF3Q9NR55 127 aa2.1□□□□□ -2.07
TTC3-220ENST00000487711 EURLQ9NYK6 297 aa2.1□□□□□ -2.07
TTC3-220ENST00000487711 STX18Q9P2W9 335 aaKnown RBP2.1□□□□□ -2.07
TTC3-220ENST00000487711 ENPP5Q9UJA9 477 aa2.1□□□□□ -2.07
TTC3-220ENST00000487711 DNAJC12Q9UKB3 198 aa2.1□□□□□ -2.07
TTC3-220ENST00000487711 GOLT1BQ9Y3E0 138 aa2.1□□□□□ -2.07
TTC3-220ENST00000487711 PTPRFP10586 1907 aa2.1□□□□□ -2.07
TTC3-220ENST00000487711 CLUHO75153 1309 aa2.1□□□□□ -2.07
TTC3-220ENST00000487711 EP400Q96L91 3159 aa2.1□□□□□ -2.07
TTC3-220ENST00000487711 ZNF236Q9UL36 1845 aa2.1□□□□□ -2.07
TTC3-220ENST00000487711 ANKRD12Q6UB98 2062 aa2.1□□□□□ -2.07
TTC3-220ENST00000487711 WDR90Q96KV7 1748 aa2.09□□□□□ -2.07
TTC3-220ENST00000487711 ZNF816-ZNF321PA0A0X1KG74 233 aa2.09□□□□□ -2.07
TTC3-220ENST00000487711 A0A1B0GW55 424 aa2.09□□□□□ -2.07
TTC3-220ENST00000487711 RNASEK-C17orf49H0YIS7 233 aa2.09□□□□□ -2.07
TTC3-220ENST00000487711 K7EMT4 169 aa2.09□□□□□ -2.07
TTC3-220ENST00000487711 NDUFS6O75380 124 aaKnown RBP2.09□□□□□ -2.07
TTC3-220ENST00000487711 DCTN3O75935 186 aa2.09□□□□□ -2.07
TTC3-220ENST00000487711 PROSCO94903 275 aa2.09□□□□□ -2.07
TTC3-220ENST00000487711 TTC4O95801 387 aa2.09□□□□□ -2.07
TTC3-220ENST00000487711 IL4P05112 153 aa2.09□□□□□ -2.07
TTC3-220ENST00000487711 DUX4L2P0CJ85 424 aa2.09□□□□□ -2.07
TTC3-220ENST00000487711 DUX4L3P0CJ86 424 aa2.09□□□□□ -2.07
TTC3-220ENST00000487711 DUX4L5P0CJ88 424 aa2.09□□□□□ -2.07
TTC3-220ENST00000487711 DUX4L6P0CJ89 424 aa2.09□□□□□ -2.07
TTC3-220ENST00000487711 DUX4L7P0CJ90 424 aa2.09□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms