RNA–Protein interactions for RNA: ENST00000487485.1

TOP3B-216, Transcript of DNA topoisomerase III beta, humanhuman

TSL 3

Gene TOP3B, Length 725 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-216ENST00000487485 CDH26Q8IXH8 852 aa8.92□□□□□ -0.98
TOP3B-216ENST00000487485 JAGN1Q8N5M9 183 aa8.92□□□□□ -0.98
TOP3B-216ENST00000487485 ZSCAN4Q8NAM6 433 aaPredicted RBP8.92□□□□□ -0.98
TOP3B-216ENST00000487485 OR5T2Q8NGG2 359 aa8.92□□□□□ -0.98
TOP3B-216ENST00000487485 TNFAIP8L1Q8WVP5 186 aa8.92□□□□□ -0.98
TOP3B-216ENST00000487485 CEP19Q96LK0 163 aa8.92□□□□□ -0.98
TOP3B-216ENST00000487485 NKX3-1Q99801 234 aaPredicted RBP8.92□□□□□ -0.98
TOP3B-216ENST00000487485 NRIP2Q9BQI9 281 aa8.92□□□□□ -0.98
TOP3B-216ENST00000487485 OR51E2Q9H255 320 aa8.92□□□□□ -0.98
TOP3B-216ENST00000487485 ZNF665Q9H7R5 613 aa8.92□□□□□ -0.98
TOP3B-216ENST00000487485 SMURF1Q9HCE7 757 aa8.92□□□□□ -0.98
TOP3B-216ENST00000487485 EXOSC4Q9NPD3 245 aaKnown RBP8.92□□□□□ -0.98
TOP3B-216ENST00000487485 SNTG1Q9NSN8 517 aa8.92□□□□□ -0.98
TOP3B-216ENST00000487485 TXNL4BQ9NX01 149 aaKnown RBP8.92□□□□□ -0.98
TOP3B-216ENST00000487485 NLKQ9UBE8 527 aa8.92□□□□□ -0.98
TOP3B-216ENST00000487485 SSR3Q9UNL2 185 aa8.92□□□□□ -0.98
TOP3B-216ENST00000487485 IGKV1-12A0A0C4DH73 117 aa8.91□□□□□ -0.98
TOP3B-216ENST00000487485 CEACAM18A8MTB9 384 aa8.91□□□□□ -0.98
TOP3B-216ENST00000487485 TNFRSF13BO14836 293 aaPredicted RBP8.91□□□□□ -0.98
TOP3B-216ENST00000487485 NDUFA2O43678 99 aa8.91□□□□□ -0.98
TOP3B-216ENST00000487485 KDM4BO94953 1096 aa8.91□□□□□ -0.98
TOP3B-216ENST00000487485 IGKV1D-12P01611 117 aa8.91□□□□□ -0.98
TOP3B-216ENST00000487485 IGHV2-5P01817 119 aa8.91□□□□□ -0.98
TOP3B-216ENST00000487485 WNT2P09544 360 aa8.91□□□□□ -0.98
TOP3B-216ENST00000487485 ADRA2CP18825 462 aa8.91□□□□□ -0.98
TOP3B-216ENST00000487485 BCL3P20749 454 aa8.91□□□□□ -0.98
TOP3B-216ENST00000487485 GADD45AP24522 165 aa8.91□□□□□ -0.98
TOP3B-216ENST00000487485 FGF9P31371 208 aaPredicted RBP8.91□□□□□ -0.98
TOP3B-216ENST00000487485 PTGFRP43088 359 aa8.91□□□□□ -0.98
TOP3B-216ENST00000487485 OR3A4PP47883 348 aa8.91□□□□□ -0.98
TOP3B-216ENST00000487485 NPBWR2P48146 333 aa8.91□□□□□ -0.98
TOP3B-216ENST00000487485 C1QL2Q7Z5L3 287 aa8.91□□□□□ -0.98
TOP3B-216ENST00000487485 Q8IYB0 196 aa8.91□□□□□ -0.98
TOP3B-216ENST00000487485 SAXO1Q8IYX7 474 aa8.91□□□□□ -0.98
TOP3B-216ENST00000487485 NKAIN3Q8N8D7 197 aa8.91□□□□□ -0.98
TOP3B-216ENST00000487485 PNLDC1Q8NA58 520 aaKnown RBP8.91□□□□□ -0.98
TOP3B-216ENST00000487485 PXT1Q8NFP0 134 aa8.91□□□□□ -0.98
TOP3B-216ENST00000487485 C12orf43Q96C57 262 aaKnown RBP8.91□□□□□ -0.98
TOP3B-216ENST00000487485 FOXRED1Q96CU9 486 aaPredicted RBP8.91□□□□□ -0.98
TOP3B-216ENST00000487485 RAB39BQ96DA2 213 aa8.91□□□□□ -0.98
TOP3B-216ENST00000487485 YIPF6Q96EC8 236 aa8.91□□□□□ -0.98
TOP3B-216ENST00000487485 FAM192AQ9GZU8 254 aa8.91□□□□□ -0.98
TOP3B-216ENST00000487485 CNTD2Q9H8S5 307 aa8.91□□□□□ -0.98
TOP3B-216ENST00000487485 PATZ1Q9HBE1 687 aaKnown RBP8.91□□□□□ -0.98
TOP3B-216ENST00000487485 HES4Q9HCC6 221 aa8.91□□□□□ -0.98
TOP3B-216ENST00000487485 MIOXQ9UGB7 285 aa8.91□□□□□ -0.98
TOP3B-216ENST00000487485 ING4Q9UNL4 249 aa8.91□□□□□ -0.98
TOP3B-216ENST00000487485 GSTK1Q9Y2Q3 226 aa8.91□□□□□ -0.98
TOP3B-216ENST00000487485 AK6Q9Y3D8 172 aaKnown RBP8.91□□□□□ -0.98
TOP3B-216ENST00000487485 DOCK11Q5JSL3 2073 aa8.91□□□□□ -0.98
TOP3B-216ENST00000487485 MEGF8Q7Z7M0 2845 aa8.91□□□□□ -0.98
TOP3B-216ENST00000487485 TRAV1-2A0A0B4J238 106 aa8.9□□□□□ -0.98
TOP3B-216ENST00000487485 OR2AT4A6NND4 320 aa8.9□□□□□ -0.98
TOP3B-216ENST00000487485 ADAM20O43506 726 aa8.9□□□□□ -0.98
TOP3B-216ENST00000487485 CDRT1O95170 752 aa8.9□□□□□ -0.98
TOP3B-216ENST00000487485 TFF1P04155 84 aa8.9□□□□□ -0.98
TOP3B-216ENST00000487485 TFAP2AP05549 437 aa8.9□□□□□ -0.98
TOP3B-216ENST00000487485 CALCBP10092 127 aa8.9□□□□□ -0.98
TOP3B-216ENST00000487485 PSG2P11465 335 aa8.9□□□□□ -0.98
TOP3B-216ENST00000487485 RPS2P15880 293 aaKnown RBP8.9□□□□□ -0.98
TOP3B-216ENST00000487485 MYL9P24844 172 aa8.9□□□□□ -0.98
TOP3B-216ENST00000487485 SMIM21Q3B7S5 101 aa8.9□□□□□ -0.98
TOP3B-216ENST00000487485 FAM120AOSQ5T036 256 aa8.9□□□□□ -0.98
TOP3B-216ENST00000487485 ATPAF1Q5TC12 328 aaPredicted RBP8.9□□□□□ -0.98
TOP3B-216ENST00000487485 GLT8D1Q68CQ7 371 aa8.9□□□□□ -0.98
TOP3B-216ENST00000487485 STUMQ69YW2 141 aa8.9□□□□□ -0.98
TOP3B-216ENST00000487485 ASCL4Q6XD76 172 aa8.9□□□□□ -0.98
TOP3B-216ENST00000487485 LYPD6Q86Y78 171 aa8.9□□□□□ -0.98
TOP3B-216ENST00000487485 FAM58AQ8N1B3 248 aa8.9□□□□□ -0.98
TOP3B-216ENST00000487485 OR13F1Q8NGS4 319 aa8.9□□□□□ -0.98
TOP3B-216ENST00000487485 ANGPTL6Q8NI99 470 aa8.9□□□□□ -0.98
TOP3B-216ENST00000487485 EMG1Q92979 244 aaKnown RBP8.9□□□□□ -0.98
TOP3B-216ENST00000487485 NEIL1Q96FI4 390 aaPredicted RBP8.9□□□□□ -0.98
TOP3B-216ENST00000487485 C1orf159Q96HA4 380 aa8.9□□□□□ -0.98
TOP3B-216ENST00000487485 S100A13Q99584 98 aa8.9□□□□□ -0.98
TOP3B-216ENST00000487485 CCL13Q99616 98 aa8.9□□□□□ -0.98
TOP3B-216ENST00000487485 CHCHD6Q9BRQ6 235 aa8.9□□□□□ -0.98
TOP3B-216ENST00000487485 UQCC2Q9BRT2 126 aa8.9□□□□□ -0.98
TOP3B-216ENST00000487485 ELL3Q9HB65 397 aaPredicted RBP8.9□□□□□ -0.98
TOP3B-216ENST00000487485 RHOFQ9HBH0 211 aa8.9□□□□□ -0.98
TOP3B-216ENST00000487485 RBFOX1Q9NWB1 397 aaKnown RBP8.9□□□□□ -0.98
TOP3B-216ENST00000487485 IGKV1D-17A0A075B6S4 117 aa8.89□□□□□ -0.99
TOP3B-216ENST00000487485 LOC100506127A0A0U1RQW1 187 aa8.89□□□□□ -0.99
TOP3B-216ENST00000487485 SHISA3A0PJX4 238 aa8.89□□□□□ -0.99
TOP3B-216ENST00000487485 RFPL4AA6NLU0 287 aa8.89□□□□□ -0.99
TOP3B-216ENST00000487485 FAM157AC9JC47 383 aa8.89□□□□□ -0.99
TOP3B-216ENST00000487485 F5H0A9 414 aaPredicted RBP8.89□□□□□ -0.99
TOP3B-216ENST00000487485 RFPL4AL1F8VTS6 287 aa8.89□□□□□ -0.99
TOP3B-216ENST00000487485 TMPRSS2O15393 492 aa8.89□□□□□ -0.99
TOP3B-216ENST00000487485 KCNAB3O43448 404 aa8.89□□□□□ -0.99
TOP3B-216ENST00000487485 AIREO43918 545 aa8.89□□□□□ -0.99
TOP3B-216ENST00000487485 SFTPBP07988 381 aa8.89□□□□□ -0.99
TOP3B-216ENST00000487485 CD37P11049 281 aa8.89□□□□□ -0.99
TOP3B-216ENST00000487485 PRKACAP17612 351 aa8.89□□□□□ -0.99
TOP3B-216ENST00000487485 AMY2BP19961 511 aa8.89□□□□□ -0.99
TOP3B-216ENST00000487485 CPT2P23786 658 aa8.89□□□□□ -0.99
TOP3B-216ENST00000487485 PRDX2P32119 198 aa8.89□□□□□ -0.99
TOP3B-216ENST00000487485 GABRA2P47869 451 aa8.89□□□□□ -0.99
TOP3B-216ENST00000487485 ALDH3B2P48448 385 aa8.89□□□□□ -0.99
TOP3B-216ENST00000487485 SEC61A1P61619 476 aaKnown RBP8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms