RNA–Protein interactions for RNA: ENST00000486404.5

CHMP3-208, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-208ENST00000486404 A0A1W2PR64 198 aa10.58□□□□□ -0.72
CHMP3-208ENST00000486404 A0A1W2PRV1 198 aa10.58□□□□□ -0.72
CHMP3-208ENST00000486404 IRGMA1A4Y4 181 aa10.58□□□□□ -0.72
CHMP3-208ENST00000486404 TMEM212A6NML5 194 aa10.58□□□□□ -0.72
CHMP3-208ENST00000486404 RNASEK-C17orf49H0YIS7 233 aa10.58□□□□□ -0.72
CHMP3-208ENST00000486404 ANGPTL7O43827 346 aa10.58□□□□□ -0.72
CHMP3-208ENST00000486404 RPSAP08865 295 aaKnown RBP10.58□□□□□ -0.72
CHMP3-208ENST00000486404 ATF1P18846 271 aa10.58□□□□□ -0.72
CHMP3-208ENST00000486404 DLX1P56177 255 aa10.58□□□□□ -0.72
CHMP3-208ENST00000486404 UTS2BQ765I0 119 aa10.58□□□□□ -0.72
CHMP3-208ENST00000486404 EGFL6Q8IUX8 553 aa10.58□□□□□ -0.72
CHMP3-208ENST00000486404 MKXQ8IYA7 352 aa10.58□□□□□ -0.72
CHMP3-208ENST00000486404 PACRGLQ8N7B6 248 aa10.58□□□□□ -0.72
CHMP3-208ENST00000486404 Q8N7P7 452 aa10.58□□□□□ -0.72
CHMP3-208ENST00000486404 SETD9Q8NE22 299 aa10.58□□□□□ -0.72
CHMP3-208ENST00000486404 DNAAF1Q8NEP3 725 aa10.58□□□□□ -0.72
CHMP3-208ENST00000486404 OR52I1Q8NGK6 324 aa10.58□□□□□ -0.72
CHMP3-208ENST00000486404 OR13C9Q8NGT0 318 aa10.58□□□□□ -0.72
CHMP3-208ENST00000486404 HAVCR2Q8TDQ0 301 aa10.58□□□□□ -0.72
CHMP3-208ENST00000486404 APH1BQ8WW43 257 aa10.58□□□□□ -0.72
CHMP3-208ENST00000486404 FAM234AQ9H0X4 552 aa10.58□□□□□ -0.72
CHMP3-208ENST00000486404 DPAGT1Q9H3H5 408 aa10.58□□□□□ -0.72
CHMP3-208ENST00000486404 PRDM13Q9H4Q3 707 aa10.58□□□□□ -0.72
CHMP3-208ENST00000486404 DHDHQ9UQ10 334 aa10.58□□□□□ -0.72
CHMP3-208ENST00000486404 MEIOCA2RUB1 952 aa10.57□□□□□ -0.72
CHMP3-208ENST00000486404 FAM181BA6NEQ2 426 aa10.57□□□□□ -0.72
CHMP3-208ENST00000486404 OR4C45A6NMZ5 311 aa10.57□□□□□ -0.72
CHMP3-208ENST00000486404 IGHV4-59P01825 116 aa10.57□□□□□ -0.72
CHMP3-208ENST00000486404 TK1P04183 234 aa10.57□□□□□ -0.72
CHMP3-208ENST00000486404 HCKP08631 526 aa10.57□□□□□ -0.72
CHMP3-208ENST00000486404 PIPP12273 146 aaPredicted RBP10.57□□□□□ -0.72
CHMP3-208ENST00000486404 MYL12AP19105 171 aa10.57□□□□□ -0.72
CHMP3-208ENST00000486404 PEX2P28328 305 aa10.57□□□□□ -0.72
CHMP3-208ENST00000486404 SAA4P35542 130 aa10.57□□□□□ -0.72
CHMP3-208ENST00000486404 SNU13P55769 128 aaKnown RBP10.57□□□□□ -0.72
CHMP3-208ENST00000486404 EDDM3BP56851 147 aa10.57□□□□□ -0.72
CHMP3-208ENST00000486404 ERVK11-1P61568 191 aa10.57□□□□□ -0.72
CHMP3-208ENST00000486404 COL10A1Q03692 680 aa10.57□□□□□ -0.72
CHMP3-208ENST00000486404 C1orf122Q6ZSJ8 110 aa10.57□□□□□ -0.72
CHMP3-208ENST00000486404 GDPD3Q7L5L3 318 aa10.57□□□□□ -0.72
CHMP3-208ENST00000486404 LDLRAD3Q86YD5 345 aa10.57□□□□□ -0.72
CHMP3-208ENST00000486404 OR4M1Q8NGD0 313 aa10.57□□□□□ -0.72
CHMP3-208ENST00000486404 OR51A4Q8NGJ6 313 aa10.57□□□□□ -0.72
CHMP3-208ENST00000486404 OR10AC1Q8NH08 325 aa10.57□□□□□ -0.72
CHMP3-208ENST00000486404 OR5AK2Q8NH90 309 aa10.57□□□□□ -0.72
CHMP3-208ENST00000486404 RNF166Q96A37 237 aaPredicted RBP10.57□□□□□ -0.72
CHMP3-208ENST00000486404 RFT1Q96AA3 541 aa10.57□□□□□ -0.72
CHMP3-208ENST00000486404 CPNE2Q96FN4 548 aaPredicted RBP10.57□□□□□ -0.72
CHMP3-208ENST00000486404 CHIAQ9BZP6 476 aa10.57□□□□□ -0.72
CHMP3-208ENST00000486404 VCXQ9H320 206 aa10.57□□□□□ -0.72
CHMP3-208ENST00000486404 ISG20L2Q9H9L3 353 aaKnown RBP10.57□□□□□ -0.72
CHMP3-208ENST00000486404 MTCH1Q9NZJ7 389 aa10.57□□□□□ -0.72
CHMP3-208ENST00000486404 GLS2Q9UI32 602 aa10.57□□□□□ -0.72
CHMP3-208ENST00000486404 PCDHGB5Q9Y5G0 923 aa10.57□□□□□ -0.72
CHMP3-208ENST00000486404 TRBV2A0A0J9YWF9 115 aa10.56□□□□□ -0.72
CHMP3-208ENST00000486404 SPRY1O43609 319 aaPredicted RBP10.56□□□□□ -0.72
CHMP3-208ENST00000486404 CLIC3O95833 236 aa10.56□□□□□ -0.72
CHMP3-208ENST00000486404 HAND1O96004 215 aa10.56□□□□□ -0.72
CHMP3-208ENST00000486404 CHRM2P08172 466 aa10.56□□□□□ -0.72
CHMP3-208ENST00000486404 PRKACAP17612 351 aa10.56□□□□□ -0.72
CHMP3-208ENST00000486404 BCL3P20749 454 aa10.56□□□□□ -0.72
CHMP3-208ENST00000486404 OMGP23515 440 aa10.56□□□□□ -0.72
CHMP3-208ENST00000486404 GABRR1P24046 479 aa10.56□□□□□ -0.72
CHMP3-208ENST00000486404 UBE2E1P51965 193 aa10.56□□□□□ -0.72
CHMP3-208ENST00000486404 RAG2P55895 527 aa10.56□□□□□ -0.72
CHMP3-208ENST00000486404 MED21Q13503 144 aa10.56□□□□□ -0.72
CHMP3-208ENST00000486404 EDDM3AQ14507 147 aa10.56□□□□□ -0.72
CHMP3-208ENST00000486404 SMN1Q16637 294 aaKnown RBP10.56□□□□□ -0.72
CHMP3-208ENST00000486404 ZNF691Q5VV52 312 aa10.56□□□□□ -0.72
CHMP3-208ENST00000486404 TTC23Q5W5X9 447 aa10.56□□□□□ -0.72
CHMP3-208ENST00000486404 LPCAT4Q643R3 524 aa10.56□□□□□ -0.72
CHMP3-208ENST00000486404 PNKDQ8N490 385 aa10.56□□□□□ -0.72
CHMP3-208ENST00000486404 ZSCAN4Q8NAM6 433 aaPredicted RBP10.56□□□□□ -0.72
CHMP3-208ENST00000486404 OR4F5Q8NH21 305 aa10.56□□□□□ -0.72
CHMP3-208ENST00000486404 CNIH3Q8TBE1 160 aa10.56□□□□□ -0.72
CHMP3-208ENST00000486404 ZCCHC4Q9H5U6 513 aa10.56□□□□□ -0.72
CHMP3-208ENST00000486404 UNKLQ9H9P5 680 aaKnown RBP10.56□□□□□ -0.72
CHMP3-208ENST00000486404 RBFOX1Q9NWB1 397 aaKnown RBP10.56□□□□□ -0.72
CHMP3-208ENST00000486404 ZNRD1Q9P1U0 126 aa10.56□□□□□ -0.72
CHMP3-208ENST00000486404 SF3B6Q9Y3B4 125 aaKnown RBP10.56□□□□□ -0.72
CHMP3-208ENST00000486404 IGKV1-9A0A0C4DH69 117 aa10.55□□□□□ -0.72
CHMP3-208ENST00000486404 F8VVB4 439 aa10.55□□□□□ -0.72
CHMP3-208ENST00000486404 F8VWA3 439 aa10.55□□□□□ -0.72
CHMP3-208ENST00000486404 K7N7A8 449 aa10.55□□□□□ -0.72
CHMP3-208ENST00000486404 WBP4O75554 376 aaKnown RBP10.55□□□□□ -0.72
CHMP3-208ENST00000486404 ZFPL1O95159 310 aa10.55□□□□□ -0.72
CHMP3-208ENST00000486404 COX7A1P24310 79 aa10.55□□□□□ -0.72
CHMP3-208ENST00000486404 IER3P46695 156 aa10.55□□□□□ -0.72
CHMP3-208ENST00000486404 ERVFRD-1P60508 538 aa10.55□□□□□ -0.72
CHMP3-208ENST00000486404 RPL15P61313 204 aaKnown RBP10.55□□□□□ -0.72
CHMP3-208ENST00000486404 ACSM1Q08AH1 577 aa10.55□□□□□ -0.72
CHMP3-208ENST00000486404 SPIN3Q5JUX0 258 aa10.55□□□□□ -0.72
CHMP3-208ENST00000486404 DMRTA1Q5VZB9 504 aa10.55□□□□□ -0.72
CHMP3-208ENST00000486404 SHISA2Q6UWI4 295 aa10.55□□□□□ -0.72
CHMP3-208ENST00000486404 TMPRSS11AQ6ZMR5 421 aa10.55□□□□□ -0.72
CHMP3-208ENST00000486404 OR8H2Q8N162 312 aa10.55□□□□□ -0.72
CHMP3-208ENST00000486404 FAM58AQ8N1B3 248 aa10.55□□□□□ -0.72
CHMP3-208ENST00000486404 DHRSXQ8N5I4 330 aa10.55□□□□□ -0.72
CHMP3-208ENST00000486404 OR5D18Q8NGL1 313 aa10.55□□□□□ -0.72
CHMP3-208ENST00000486404 PPP1R35Q8TAP8 253 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms