RNA–Protein interactions for RNA: ENST00000485024.1

VPS8-223, Transcript of VPS8, CORVET complex subunit, human

TSL 2

Gene VPS8, Length 477 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS8-223	ENST00000485024	REEP1	Q9H902	201 aa		2.57	□□□□□ -2
VPS8-223	ENST00000485024	EDA2R	Q9HAV5	297 aa		2.57	□□□□□ -2
VPS8-223	ENST00000485024	PRSS16	Q9NQE7	514 aa		2.57	□□□□□ -2
VPS8-223	ENST00000485024	HEBP1	Q9NRV9	189 aa		2.57	□□□□□ -2
VPS8-223	ENST00000485024	MTFP1	Q9UDX5	166 aa		2.57	□□□□□ -2
VPS8-223	ENST00000485024	PTPRS	Q13332	1948 aa		2.57	□□□□□ -2
VPS8-223	ENST00000485024	GTF3C1	Q12789	2109 aa		2.57	□□□□□ -2
VPS8-223	ENST00000485024	ANKRD36C	Q5JPF3	1778 aa		2.56	□□□□□ -2
VPS8-223	ENST00000485024	ASCC3	Q8N3C0	2202 aa	Known RBP	2.56	□□□□□ -2
VPS8-223	ENST00000485024	IGLV2-33	A0A075B6J2	118 aa	Predicted RBP	2.56	□□□□□ -2
VPS8-223	ENST00000485024	TRAV19	A0A0A6YYK7	116 aa		2.56	□□□□□ -2
VPS8-223	ENST00000485024	IGHV5-10-1	A0A0J9YXX1	117 aa		2.56	□□□□□ -2
VPS8-223	ENST00000485024		A0A1W2PP18	115 aa		2.56	□□□□□ -2
VPS8-223	ENST00000485024	GABRP	O00591	440 aa		2.56	□□□□□ -2
VPS8-223	ENST00000485024	YKT6	O15498	198 aa		2.56	□□□□□ -2
VPS8-223	ENST00000485024	SLC16A7	O60669	478 aa		2.56	□□□□□ -2
VPS8-223	ENST00000485024	RP2	O75695	350 aa		2.56	□□□□□ -2
VPS8-223	ENST00000485024	PLEKHA8P1	O95397	391 aa		2.56	□□□□□ -2
VPS8-223	ENST00000485024	RHOC	P08134	193 aa		2.56	□□□□□ -2
VPS8-223	ENST00000485024	HOXC4	P09017	264 aa	Predicted RBP	2.56	□□□□□ -2
VPS8-223	ENST00000485024	PGA5	P0DJD9	388 aa		2.56	□□□□□ -2
VPS8-223	ENST00000485024	PSG2	P11465	335 aa		2.56	□□□□□ -2
VPS8-223	ENST00000485024	SERPINB8	P50452	374 aa		2.56	□□□□□ -2
VPS8-223	ENST00000485024	CDKN2D	P55273	166 aa		2.56	□□□□□ -2
VPS8-223	ENST00000485024	RPL18A	Q02543	176 aa	Known RBP	2.56	□□□□□ -2
VPS8-223	ENST00000485024	ST3GAL4	Q11206	333 aa		2.56	□□□□□ -2
VPS8-223	ENST00000485024	ZNF266	Q14584	549 aa		2.56	□□□□□ -2
VPS8-223	ENST00000485024	STK11	Q15831	433 aa		2.56	□□□□□ -2
VPS8-223	ENST00000485024	KRTAP21-2	Q3LI59	83 aa		2.56	□□□□□ -2
VPS8-223	ENST00000485024	PLET1	Q6UQ28	207 aa		2.56	□□□□□ -2
VPS8-223	ENST00000485024	CALHM1	Q8IU99	346 aa		2.56	□□□□□ -2
VPS8-223	ENST00000485024		Q8N7P7	452 aa		2.56	□□□□□ -2
VPS8-223	ENST00000485024	ZFP41	Q8N8Y5	198 aa		2.56	□□□□□ -2
VPS8-223	ENST00000485024	OR10AD1	Q8NGE0	317 aa		2.56	□□□□□ -2
VPS8-223	ENST00000485024	OR6N2	Q8NGY6	317 aa		2.56	□□□□□ -2
VPS8-223	ENST00000485024	ZNF596	Q8TC21	504 aa		2.56	□□□□□ -2
VPS8-223	ENST00000485024	PIFO	Q8TCI5	191 aa		2.56	□□□□□ -2
VPS8-223	ENST00000485024	RNF170	Q96K19	258 aa		2.56	□□□□□ -2
VPS8-223	ENST00000485024	RNF145	Q96MT1	663 aa		2.56	□□□□□ -2
VPS8-223	ENST00000485024	FOPNL	Q96NB1	174 aa		2.56	□□□□□ -2
VPS8-223	ENST00000485024	COL21A1	Q96P44	957 aa		2.56	□□□□□ -2
VPS8-223	ENST00000485024	CHAC1	Q9BUX1	264 aa		2.56	□□□□□ -2
VPS8-223	ENST00000485024	TPK1	Q9H3S4	243 aa		2.56	□□□□□ -2
VPS8-223	ENST00000485024	WDR55	Q9H6Y2	383 aa	Predicted RBP	2.56	□□□□□ -2
VPS8-223	ENST00000485024	TMEM27	Q9HBJ8	222 aa		2.56	□□□□□ -2
VPS8-223	ENST00000485024	C6orf50	Q9HD87	102 aa		2.56	□□□□□ -2
VPS8-223	ENST00000485024	ZNF331	Q9NQX6	463 aa	Predicted RBP	2.56	□□□□□ -2
VPS8-223	ENST00000485024	RGS18	Q9NS28	235 aa		2.56	□□□□□ -2
VPS8-223	ENST00000485024	TREX1	Q9NSU2	369 aa		2.56	□□□□□ -2
VPS8-223	ENST00000485024	CHMP5	Q9NZZ3	219 aa		2.56	□□□□□ -2
VPS8-223	ENST00000485024	GGA2	Q9UJY4	613 aa		2.56	□□□□□ -2
VPS8-223	ENST00000485024	CES1P1	Q9UKY3	287 aa		2.56	□□□□□ -2
VPS8-223	ENST00000485024	CFL2	Q9Y281	166 aa		2.56	□□□□□ -2
VPS8-223	ENST00000485024	HES2	Q9Y543	173 aa		2.56	□□□□□ -2
VPS8-223	ENST00000485024	WSB1	Q9Y6I7	421 aa		2.56	□□□□□ -2
VPS8-223	ENST00000485024	CLUH	O75153	1309 aa		2.56	□□□□□ -2
VPS8-223	ENST00000485024	RYR2	Q92736	4967 aa		2.56	□□□□□ -2
VPS8-223	ENST00000485024	IGLV4-69	A0A075B6H9	119 aa		2.55	□□□□□ -2
VPS8-223	ENST00000485024		A0A0J9YXV3	536 aa		2.55	□□□□□ -2
VPS8-223	ENST00000485024	RSPH10B2	B2RC85	870 aa		2.55	□□□□□ -2
VPS8-223	ENST00000485024	ANKRD63	C9JTQ0	380 aa		2.55	□□□□□ -2
VPS8-223	ENST00000485024	TMX2-CTNND1	H3BSU7	103 aa		2.55	□□□□□ -2
VPS8-223	ENST00000485024		H7C1H1	209 aa		2.55	□□□□□ -2
VPS8-223	ENST00000485024	MYL12B	O14950	172 aa		2.55	□□□□□ -2
VPS8-223	ENST00000485024	SLC22A5	O76082	557 aa		2.55	□□□□□ -2
VPS8-223	ENST00000485024	RSPH10B	P0C881	870 aa		2.55	□□□□□ -2
VPS8-223	ENST00000485024	PGA4	P0DJD7	388 aa		2.55	□□□□□ -2
VPS8-223	ENST00000485024	PGA3	P0DJD8	388 aa		2.55	□□□□□ -2
VPS8-223	ENST00000485024	CD37	P11049	281 aa		2.55	□□□□□ -2
VPS8-223	ENST00000485024	PSMC3	P17980	439 aa		2.55	□□□□□ -2
VPS8-223	ENST00000485024	TCP1	P17987	556 aa	Known RBP	2.55	□□□□□ -2
VPS8-223	ENST00000485024	BGN	P21810	368 aa		2.55	□□□□□ -2
VPS8-223	ENST00000485024	PTPRB	P23467	1997 aa		2.55	□□□□□ -2
VPS8-223	ENST00000485024	DEK	P35659	375 aa	Known RBP	2.55	□□□□□ -2
VPS8-223	ENST00000485024	CCR6	P51684	374 aa		2.55	□□□□□ -2
VPS8-223	ENST00000485024	SLC35B1	P78383	322 aa		2.55	□□□□□ -2
VPS8-223	ENST00000485024	IFITM3	Q01628	133 aa		2.55	□□□□□ -2
VPS8-223	ENST00000485024	RCAN2	Q14206	197 aa		2.55	□□□□□ -2
VPS8-223	ENST00000485024	USF2	Q15853	346 aa	Predicted RBP	2.55	□□□□□ -2
VPS8-223	ENST00000485024	LIN9	Q5TKA1	542 aa		2.55	□□□□□ -2
VPS8-223	ENST00000485024	APOBEC3H	Q6NTF7	200 aa	Known RBP	2.55	□□□□□ -2
VPS8-223	ENST00000485024	PID1	Q7Z2X4	250 aa		2.55	□□□□□ -2
VPS8-223	ENST00000485024	C12orf56	Q8IXR9	622 aa		2.55	□□□□□ -2
VPS8-223	ENST00000485024	C19orf18	Q8NEA5	215 aa		2.55	□□□□□ -2
VPS8-223	ENST00000485024	OR10W1	Q8NGF6	305 aa		2.55	□□□□□ -2
VPS8-223	ENST00000485024	COQ8A	Q8NI60	647 aa		2.55	□□□□□ -2
VPS8-223	ENST00000485024	ZNF799	Q96GE5	643 aa		2.55	□□□□□ -2
VPS8-223	ENST00000485024	ZNF317	Q96PQ6	595 aa	Predicted RBP	2.55	□□□□□ -2
VPS8-223	ENST00000485024	ZNF382	Q96SR6	550 aa		2.55	□□□□□ -2
VPS8-223	ENST00000485024	TSNAX	Q99598	290 aa	Known RBP	2.55	□□□□□ -2
VPS8-223	ENST00000485024	EMC6	Q9BV81	110 aa		2.55	□□□□□ -2
VPS8-223	ENST00000485024	SLIRP	Q9GZT3	109 aa	Known RBP	2.55	□□□□□ -2
VPS8-223	ENST00000485024	NAA50	Q9GZZ1	169 aa	Known RBP	2.55	□□□□□ -2
VPS8-223	ENST00000485024	RBAK	Q9NYW8	714 aa	Predicted RBP	2.55	□□□□□ -2
VPS8-223	ENST00000485024	TMEM14A	Q9Y6G1	99 aa		2.55	□□□□□ -2
VPS8-223	ENST00000485024	HERC2	O95714	4834 aa		2.54	□□□□□ -2
VPS8-223	ENST00000485024		A0A096LNJ9	63 aa		2.54	□□□□□ -2
VPS8-223	ENST00000485024	IGHV1-69D	A0A0B4J2H0	117 aa		2.54	□□□□□ -2
VPS8-223	ENST00000485024	SEC14L6	B5MCN3	397 aa		2.54	□□□□□ -2
VPS8-223	ENST00000485024		M0QX08	132 aa		2.54	□□□□□ -2

Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms