RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 MTCP1P56278 107 aa10.07□□□□□ -0.8
MSH5-216ENST00000484309 BPIFB3P59826 476 aa10.07□□□□□ -0.8
MSH5-216ENST00000484309 OR2G6Q5TZ20 316 aa10.07□□□□□ -0.8
MSH5-216ENST00000484309 XAF1Q6GPH4 301 aa10.07□□□□□ -0.8
MSH5-216ENST00000484309 Q6YL49 198 aa10.07□□□□□ -0.8
MSH5-216ENST00000484309 EGFL6Q8IUX8 553 aa10.07□□□□□ -0.8
MSH5-216ENST00000484309 ZNF561Q8N587 486 aa10.07□□□□□ -0.8
MSH5-216ENST00000484309 DHRSXQ8N5I4 330 aa10.07□□□□□ -0.8
MSH5-216ENST00000484309 PACRGLQ8N7B6 248 aa10.07□□□□□ -0.8
MSH5-216ENST00000484309 C3orf56Q8N813 242 aa10.07□□□□□ -0.8
MSH5-216ENST00000484309 OR5AK2Q8NH90 309 aa10.07□□□□□ -0.8
MSH5-216ENST00000484309 TSEN15Q8WW01 171 aaKnown RBP10.07□□□□□ -0.8
MSH5-216ENST00000484309 OPALINQ96PE5 141 aa10.07□□□□□ -0.8
MSH5-216ENST00000484309 FGF20Q9NP95 211 aaPredicted RBP10.07□□□□□ -0.8
MSH5-216ENST00000484309 MRPS18AQ9NVS2 196 aaKnown RBP10.07□□□□□ -0.8
MSH5-216ENST00000484309 RBFOX1Q9NWB1 397 aaKnown RBP10.07□□□□□ -0.8
MSH5-216ENST00000484309 TRBV23-1A0A0A0MS06 115 aa10.06□□□□□ -0.8
MSH5-216ENST00000484309 TRBV2A0A0J9YWF9 115 aa10.06□□□□□ -0.8
MSH5-216ENST00000484309 CLDN34H7C241 214 aa10.06□□□□□ -0.8
MSH5-216ENST00000484309 NPFFO15130 113 aa10.06□□□□□ -0.8
MSH5-216ENST00000484309 KNG1P01042 644 aa10.06□□□□□ -0.8
MSH5-216ENST00000484309 TK1P04183 234 aa10.06□□□□□ -0.8
MSH5-216ENST00000484309 GNAO1P09471 354 aa10.06□□□□□ -0.8
MSH5-216ENST00000484309 CCL3L1P16619 93 aa10.06□□□□□ -0.8
MSH5-216ENST00000484309 PRKACBP22694 351 aa10.06□□□□□ -0.8
MSH5-216ENST00000484309 DUSP1P28562 367 aa10.06□□□□□ -0.8
MSH5-216ENST00000484309 SOX2P48431 317 aa10.06□□□□□ -0.8
MSH5-216ENST00000484309 COMPP49747 757 aaPredicted RBP10.06□□□□□ -0.8
MSH5-216ENST00000484309 ERVFRD-1P60508 538 aa10.06□□□□□ -0.8
MSH5-216ENST00000484309 RPL31P62899 125 aaKnown RBP10.06□□□□□ -0.8
MSH5-216ENST00000484309 ADARB1P78563 741 aaKnown RBP10.06□□□□□ -0.8
MSH5-216ENST00000484309 ZNF273Q14593 569 aa10.06□□□□□ -0.8
MSH5-216ENST00000484309 OGFRL1Q5TC84 451 aaPredicted RBP10.06□□□□□ -0.8
MSH5-216ENST00000484309 TTC23Q5W5X9 447 aa10.06□□□□□ -0.8
MSH5-216ENST00000484309 FIP1L1Q6UN15 594 aaKnown RBP10.06□□□□□ -0.8
MSH5-216ENST00000484309 LHFPL2Q6ZUX7 228 aa10.06□□□□□ -0.8
MSH5-216ENST00000484309 UTS2BQ765I0 119 aa10.06□□□□□ -0.8
MSH5-216ENST00000484309 SETD9Q8NE22 299 aa10.06□□□□□ -0.8
MSH5-216ENST00000484309 DNAAF1Q8NEP3 725 aa10.06□□□□□ -0.8
MSH5-216ENST00000484309 RGP1Q92546 391 aaPredicted RBP10.06□□□□□ -0.8
MSH5-216ENST00000484309 TNFRSF14Q92956 283 aa10.06□□□□□ -0.8
MSH5-216ENST00000484309 MYCBPQ99417 103 aaPredicted RBP10.06□□□□□ -0.8
MSH5-216ENST00000484309 CHIAQ9BZP6 476 aa10.06□□□□□ -0.8
MSH5-216ENST00000484309 COMMD4Q9H0A8 199 aa10.06□□□□□ -0.8
MSH5-216ENST00000484309 PRDM13Q9H4Q3 707 aa10.06□□□□□ -0.8
MSH5-216ENST00000484309 NEK6Q9HC98 313 aa10.06□□□□□ -0.8
MSH5-216ENST00000484309 NOX4Q9NPH5 578 aa10.06□□□□□ -0.8
MSH5-216ENST00000484309 IGKV1-12A0A0C4DH73 117 aa10.05□□□□□ -0.8
MSH5-216ENST00000484309 TMEM82A0PJX8 343 aa10.05□□□□□ -0.8
MSH5-216ENST00000484309 FAM181BA6NEQ2 426 aa10.05□□□□□ -0.8
MSH5-216ENST00000484309 TMEM212A6NML5 194 aa10.05□□□□□ -0.8
MSH5-216ENST00000484309 M0R1W7 72 aa10.05□□□□□ -0.8
MSH5-216ENST00000484309 HAND1O96004 215 aa10.05□□□□□ -0.8
MSH5-216ENST00000484309 CYB5AP00167 134 aa10.05□□□□□ -0.8
MSH5-216ENST00000484309 IGKV1D-12P01611 117 aa10.05□□□□□ -0.8
MSH5-216ENST00000484309 IGHV4-59P01825 116 aa10.05□□□□□ -0.8
MSH5-216ENST00000484309 HCKP08631 526 aa10.05□□□□□ -0.8
MSH5-216ENST00000484309 CCDC159P0C7I6 412 aa10.05□□□□□ -0.8
MSH5-216ENST00000484309 PRKACAP17612 351 aa10.05□□□□□ -0.8
MSH5-216ENST00000484309 EEF1B2P24534 225 aaKnown RBP10.05□□□□□ -0.8
MSH5-216ENST00000484309 EDDM3BP56851 147 aa10.05□□□□□ -0.8
MSH5-216ENST00000484309 GUCA2AQ02747 115 aa10.05□□□□□ -0.8
MSH5-216ENST00000484309 BLMHQ13867 455 aa10.05□□□□□ -0.8
MSH5-216ENST00000484309 EDDM3AQ14507 147 aa10.05□□□□□ -0.8
MSH5-216ENST00000484309 TMEM200BQ69YZ2 307 aa10.05□□□□□ -0.8
MSH5-216ENST00000484309 HCP5Q6MZN7 132 aa10.05□□□□□ -0.8
MSH5-216ENST00000484309 C16orf87Q6PH81 154 aa10.05□□□□□ -0.8
MSH5-216ENST00000484309 METAP1DQ6UB28 335 aaPredicted RBP10.05□□□□□ -0.8
MSH5-216ENST00000484309 MKXQ8IYA7 352 aa10.05□□□□□ -0.8
MSH5-216ENST00000484309 FAM58AQ8N1B3 248 aa10.05□□□□□ -0.8
MSH5-216ENST00000484309 SPSB1Q96BD6 273 aa10.05□□□□□ -0.8
MSH5-216ENST00000484309 DMRTB1Q96MA1 342 aa10.05□□□□□ -0.8
MSH5-216ENST00000484309 NKX3-1Q99801 234 aaPredicted RBP10.05□□□□□ -0.8
MSH5-216ENST00000484309 CHST6Q9GZX3 395 aa10.05□□□□□ -0.8
MSH5-216ENST00000484309 ZCCHC4Q9H5U6 513 aa10.05□□□□□ -0.8
MSH5-216ENST00000484309 METTL8Q9H825 291 aaKnown RBP10.05□□□□□ -0.8
MSH5-216ENST00000484309 NKX1-2Q9UD57 310 aaPredicted RBP10.05□□□□□ -0.8
MSH5-216ENST00000484309 CLEC2DQ9UHP7 191 aa10.05□□□□□ -0.8
MSH5-216ENST00000484309 DHDHQ9UQ10 334 aa10.05□□□□□ -0.8
MSH5-216ENST00000484309 FAM96BQ9Y3D0 163 aa10.05□□□□□ -0.8
MSH5-216ENST00000484309 MEIOCA2RUB1 952 aa10.04□□□□□ -0.8
MSH5-216ENST00000484309 K7N7A8 449 aa10.04□□□□□ -0.8
MSH5-216ENST00000484309 SIRPB1O00241 398 aa10.04□□□□□ -0.8
MSH5-216ENST00000484309 CASQ2O14958 399 aaPredicted RBP10.04□□□□□ -0.8
MSH5-216ENST00000484309 ZNF737O75373 536 aa10.04□□□□□ -0.8
MSH5-216ENST00000484309 LALBAP00709 142 aa10.04□□□□□ -0.8
MSH5-216ENST00000484309 CHRM2P08172 466 aa10.04□□□□□ -0.8
MSH5-216ENST00000484309 COX7A1P24310 79 aa10.04□□□□□ -0.8
MSH5-216ENST00000484309 PAX6P26367 422 aa10.04□□□□□ -0.8
MSH5-216ENST00000484309 DCKP27707 260 aa10.04□□□□□ -0.8
MSH5-216ENST00000484309 SAA4P35542 130 aa10.04□□□□□ -0.8
MSH5-216ENST00000484309 CAPGP40121 348 aa10.04□□□□□ -0.8
MSH5-216ENST00000484309 FOXL1Q12952 345 aa10.04□□□□□ -0.8
MSH5-216ENST00000484309 MRPL28Q13084 256 aaKnown RBP10.04□□□□□ -0.8
MSH5-216ENST00000484309 PDZK1IP1Q13113 114 aa10.04□□□□□ -0.8
MSH5-216ENST00000484309 IL18R1Q13478 541 aa10.04□□□□□ -0.8
MSH5-216ENST00000484309 CDK5R1Q15078 307 aa10.04□□□□□ -0.8
MSH5-216ENST00000484309 CRIP3Q6Q6R5 217 aa10.04□□□□□ -0.8
MSH5-216ENST00000484309 ZNF782Q6ZMW2 699 aaPredicted RBP10.04□□□□□ -0.8
MSH5-216ENST00000484309 TPRX1Q8N7U7 411 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms