RNA–Protein interactions for RNA: ENST00000484275.1

SCAF11-207, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-207ENST00000484275 OR51B5Q9H339 312 aa0.82□□□□□ -2.28
SCAF11-207ENST00000484275 TDRD3Q9H7E2 651 aaKnown RBP0.82□□□□□ -2.28
SCAF11-207ENST00000484275 KIR3DX1Q9H7L2 352 aa0.82□□□□□ -2.28
SCAF11-207ENST00000484275 CRLF2Q9HC73 371 aa0.82□□□□□ -2.28
SCAF11-207ENST00000484275 C6orf50Q9HD87 102 aa0.82□□□□□ -2.28
SCAF11-207ENST00000484275 IFNKQ9P0W0 207 aa0.82□□□□□ -2.28
SCAF11-207ENST00000484275 VAX2Q9UIW0 290 aa0.82□□□□□ -2.28
SCAF11-207ENST00000484275 SLC7A11Q9UPY5 501 aa0.82□□□□□ -2.28
SCAF11-207ENST00000484275 YLPM1P49750 1951 aaKnown RBP0.82□□□□□ -2.28
SCAF11-207ENST00000484275 MROH5Q6ZUA9 1318 aa0.82□□□□□ -2.28
SCAF11-207ENST00000484275 ATAD5Q96QE3 1844 aa0.81□□□□□ -2.28
SCAF11-207ENST00000484275 TRAV8-6A0A0B4J262 113 aa0.81□□□□□ -2.28
SCAF11-207ENST00000484275 A0A0J9YYE9 177 aa0.81□□□□□ -2.28
SCAF11-207ENST00000484275 A0A1W2PPV4 95 aa0.81□□□□□ -2.28
SCAF11-207ENST00000484275 ANKRD20A5PA0PJZ0 165 aa0.81□□□□□ -2.28
SCAF11-207ENST00000484275 GMNCA6NCL1 334 aa0.81□□□□□ -2.28
SCAF11-207ENST00000484275 H7C2Y5 167 aa0.81□□□□□ -2.28
SCAF11-207ENST00000484275 NDUFS5O43920 106 aa0.81□□□□□ -2.28
SCAF11-207ENST00000484275 TRAPPC6AO75865 159 aa0.81□□□□□ -2.28
SCAF11-207ENST00000484275 SNAI1O95863 264 aaPredicted RBP0.81□□□□□ -2.28
SCAF11-207ENST00000484275 PTTG1O95997 202 aa0.81□□□□□ -2.28
SCAF11-207ENST00000484275 TRBC1P01850 177 aa0.81□□□□□ -2.28
SCAF11-207ENST00000484275 OR5AL1P0C617 328 aa0.81□□□□□ -2.28
SCAF11-207ENST00000484275 SEC11BP0C7V7 166 aa0.81□□□□□ -2.28
SCAF11-207ENST00000484275 CFHR2P36980 270 aa0.81□□□□□ -2.28
SCAF11-207ENST00000484275 HTR2BP41595 481 aa0.81□□□□□ -2.28
SCAF11-207ENST00000484275 PSMB2P49721 201 aa0.81□□□□□ -2.28
SCAF11-207ENST00000484275 RGS6P49758 472 aa0.81□□□□□ -2.28
SCAF11-207ENST00000484275 NUDT2P50583 147 aa0.81□□□□□ -2.28
SCAF11-207ENST00000484275 BCAP31P51572 246 aa0.81□□□□□ -2.28
SCAF11-207ENST00000484275 HCCSP53701 268 aa0.81□□□□□ -2.28
SCAF11-207ENST00000484275 PAFAH1B2P68402 229 aa0.81□□□□□ -2.28
SCAF11-207ENST00000484275 SLC35B1P78383 322 aa0.81□□□□□ -2.28
SCAF11-207ENST00000484275 ATP5G2Q06055 141 aa0.81□□□□□ -2.28
SCAF11-207ENST00000484275 WDR43Q15061 677 aaKnown RBP eCLIP0.81□□□□□ -2.28
SCAF11-207ENST00000484275 TOMM34Q15785 309 aaPredicted RBP0.81□□□□□ -2.28
SCAF11-207ENST00000484275 HSP90AA4PQ58FG1 418 aa0.81□□□□□ -2.28
SCAF11-207ENST00000484275 TTC32Q5I0X7 151 aa0.81□□□□□ -2.28
SCAF11-207ENST00000484275 MRPL2Q5T653 305 aaKnown RBP0.81□□□□□ -2.28
SCAF11-207ENST00000484275 TMEM144Q7Z5S9 345 aa0.81□□□□□ -2.28
SCAF11-207ENST00000484275 VTCN1Q7Z7D3 282 aa0.81□□□□□ -2.28
SCAF11-207ENST00000484275 ZNF567Q8N184 647 aa0.81□□□□□ -2.28
SCAF11-207ENST00000484275 OR2M7Q8NG81 312 aa0.81□□□□□ -2.28
SCAF11-207ENST00000484275 TCP10LQ8TDR4 215 aa0.81□□□□□ -2.28
SCAF11-207ENST00000484275 BAALCQ8WXS3 180 aa0.81□□□□□ -2.28
SCAF11-207ENST00000484275 CIDECQ96AQ7 238 aaPredicted RBP0.81□□□□□ -2.28
SCAF11-207ENST00000484275 TSGA10Q9BZW7 698 aa0.81□□□□□ -2.28
SCAF11-207ENST00000484275 WDR55Q9H6Y2 383 aaPredicted RBP0.81□□□□□ -2.28
SCAF11-207ENST00000484275 RPRD1BQ9NQG5 326 aaKnown RBP0.81□□□□□ -2.28
SCAF11-207ENST00000484275 TFR2Q9UP52 801 aa0.81□□□□□ -2.28
SCAF11-207ENST00000484275 FLVCR2Q9UPI3 526 aa0.81□□□□□ -2.28
SCAF11-207ENST00000484275 PPIL1Q9Y3C6 166 aa0.81□□□□□ -2.28
SCAF11-207ENST00000484275 ICOSQ9Y6W8 199 aa0.81□□□□□ -2.28
SCAF11-207ENST00000484275 ENPP4Q9Y6X5 453 aa0.81□□□□□ -2.28
SCAF11-207ENST00000484275 SDK1Q7Z5N4 2213 aa0.81□□□□□ -2.28
SCAF11-207ENST00000484275 COL6A6A6NMZ7 2263 aa0.81□□□□□ -2.28
SCAF11-207ENST00000484275 TNIKQ9UKE5 1360 aa0.81□□□□□ -2.28
SCAF11-207ENST00000484275 NOS1P29475 1434 aa0.81□□□□□ -2.28
SCAF11-207ENST00000484275 CACNA1SQ13698 1873 aa0.8□□□□□ -2.28
SCAF11-207ENST00000484275 LOC100653049A0A140TA62 436 aa0.8□□□□□ -2.28
SCAF11-207ENST00000484275 GSTTP1A0A1W2PQM5 241 aa0.8□□□□□ -2.28
SCAF11-207ENST00000484275 MYBPHLA2RUH7 354 aa0.8□□□□□ -2.28
SCAF11-207ENST00000484275 C9JQL5 133 aa0.8□□□□□ -2.28
SCAF11-207ENST00000484275 J3QT63 122 aa0.8□□□□□ -2.28
SCAF11-207ENST00000484275 TCAPO15273 167 aa0.8□□□□□ -2.28
SCAF11-207ENST00000484275 KRT34O76011 436 aa0.8□□□□□ -2.28
SCAF11-207ENST00000484275 PLEKHA8P1O95397 391 aa0.8□□□□□ -2.28
SCAF11-207ENST00000484275 ETHE1O95571 254 aa0.8□□□□□ -2.28
SCAF11-207ENST00000484275 OTCP00480 354 aa0.8□□□□□ -2.28
SCAF11-207ENST00000484275 GCGP01275 180 aa0.8□□□□□ -2.28
SCAF11-207ENST00000484275 MBP02144 154 aa0.8□□□□□ -2.28
SCAF11-207ENST00000484275 TRGV3P03979 118 aa0.8□□□□□ -2.28
SCAF11-207ENST00000484275 CRYGCP07315 174 aa0.8□□□□□ -2.28
SCAF11-207ENST00000484275 SNRPAP09012 282 aaKnown RBP0.8□□□□□ -2.28
SCAF11-207ENST00000484275 HLA-GP17693 338 aa0.8□□□□□ -2.28
SCAF11-207ENST00000484275 TUBG1P23258 451 aa0.8□□□□□ -2.28
SCAF11-207ENST00000484275 GNRHRP30968 328 aa0.8□□□□□ -2.28
SCAF11-207ENST00000484275 GRB2P62993 217 aaKnown RBP0.8□□□□□ -2.28
SCAF11-207ENST00000484275 ADIGQ0VDE8 80 aa0.8□□□□□ -2.28
SCAF11-207ENST00000484275 STK38Q15208 465 aa0.8□□□□□ -2.28
SCAF11-207ENST00000484275 LGALSLQ3ZCW2 172 aaPredicted RBP0.8□□□□□ -2.28
SCAF11-207ENST00000484275 CDNFQ49AH0 187 aa0.8□□□□□ -2.28
SCAF11-207ENST00000484275 NKAIN1Q4KMZ8 207 aa0.8□□□□□ -2.28
SCAF11-207ENST00000484275 ATP6AP1LQ52LC2 224 aa0.8□□□□□ -2.28
SCAF11-207ENST00000484275 FAM27D1Q5T7N8 215 aa0.8□□□□□ -2.28
SCAF11-207ENST00000484275 SYT6Q5T7P8 510 aaPredicted RBP0.8□□□□□ -2.28
SCAF11-207ENST00000484275 KCTD16Q68DU8 428 aa0.8□□□□□ -2.28
SCAF11-207ENST00000484275 TRMT10CQ7L0Y3 403 aaKnown RBP0.8□□□□□ -2.28
SCAF11-207ENST00000484275 CYP4Z2PQ8N1L4 340 aa0.8□□□□□ -2.28
SCAF11-207ENST00000484275 ZCCHC24Q8N2G6 241 aaKnown RBP0.8□□□□□ -2.28
SCAF11-207ENST00000484275 ARHGAP18Q8N392 663 aa0.8□□□□□ -2.28
SCAF11-207ENST00000484275 OR8A1Q8NGG7 326 aa0.8□□□□□ -2.28
SCAF11-207ENST00000484275 OR51L1Q8NGJ5 315 aa0.8□□□□□ -2.28
SCAF11-207ENST00000484275 FAM57AQ8TBR7 257 aa0.8□□□□□ -2.28
SCAF11-207ENST00000484275 ING5Q8WYH8 240 aa0.8□□□□□ -2.28
SCAF11-207ENST00000484275 TFGQ92734 400 aaPredicted RBP0.8□□□□□ -2.28
SCAF11-207ENST00000484275 TOP1MTQ969P6 601 aa0.8□□□□□ -2.28
SCAF11-207ENST00000484275 CENPNQ96H22 339 aaPredicted RBP0.8□□□□□ -2.28
SCAF11-207ENST00000484275 RNF170Q96K19 258 aa0.8□□□□□ -2.28
SCAF11-207ENST00000484275 SMIM8Q96KF7 97 aa0.8□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms