RNA–Protein interactions for RNA: ENST00000479080.1

CHD3-210, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 519 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-210ENST00000479080 CEBPDP49716 269 aaPredicted RBP10.99□□□□□ -0.65
CHD3-210ENST00000479080 SNU13P55769 128 aaKnown RBP10.99□□□□□ -0.65
CHD3-210ENST00000479080 RBM11P57052 281 aaKnown RBP10.99□□□□□ -0.65
CHD3-210ENST00000479080 SCAND1P57086 179 aa10.99□□□□□ -0.65
CHD3-210ENST00000479080 NHLRC3Q5JS37 347 aa10.99□□□□□ -0.65
CHD3-210ENST00000479080 DUX4L9Q6RFH8 374 aaPredicted RBP10.99□□□□□ -0.65
CHD3-210ENST00000479080 ACP7Q6ZNF0 438 aa10.99□□□□□ -0.65
CHD3-210ENST00000479080 SAMD12Q8N8I0 201 aa10.99□□□□□ -0.65
CHD3-210ENST00000479080 DTX3Q8N9I9 347 aa10.99□□□□□ -0.65
CHD3-210ENST00000479080 OR51T1Q8NGJ9 327 aa10.99□□□□□ -0.65
CHD3-210ENST00000479080 NEU4Q8WWR8 484 aaPredicted RBP10.99□□□□□ -0.65
CHD3-210ENST00000479080 ACOT12Q8WYK0 555 aa10.99□□□□□ -0.65
CHD3-210ENST00000479080 GAL3ST1Q99999 423 aa10.99□□□□□ -0.65
CHD3-210ENST00000479080 TM2D1Q9BX74 207 aa10.99□□□□□ -0.65
CHD3-210ENST00000479080 EGLN1Q9GZT9 426 aa10.99□□□□□ -0.65
CHD3-210ENST00000479080 C6orf62Q9GZU0 229 aaPredicted RBP10.99□□□□□ -0.65
CHD3-210ENST00000479080 RAB1BQ9H0U4 201 aa10.99□□□□□ -0.65
CHD3-210ENST00000479080 MMP27Q9H306 513 aa10.99□□□□□ -0.65
CHD3-210ENST00000479080 ELL3Q9HB65 397 aaPredicted RBP10.99□□□□□ -0.65
CHD3-210ENST00000479080 RHBDL2Q9NX52 303 aa10.99□□□□□ -0.65
CHD3-210ENST00000479080 DUX4Q9UBX2 424 aa10.99□□□□□ -0.65
CHD3-210ENST00000479080 METRNQ9UJH8 293 aa10.99□□□□□ -0.65
CHD3-210ENST00000479080 ZNF222Q9UK12 451 aa10.99□□□□□ -0.65
CHD3-210ENST00000479080 FBXO9Q9UK97 447 aaPredicted RBP10.99□□□□□ -0.65
CHD3-210ENST00000479080 ETV7Q9Y603 341 aa10.99□□□□□ -0.65
CHD3-210ENST00000479080 DSCAMO60469 2012 aa10.99□□□□□ -0.65
CHD3-210ENST00000479080 IGKV1D-17A0A075B6S4 117 aa10.98□□□□□ -0.65
CHD3-210ENST00000479080 RAB27BO00194 218 aa10.98□□□□□ -0.65
CHD3-210ENST00000479080 TNFRSF13BO14836 293 aaPredicted RBP10.98□□□□□ -0.65
CHD3-210ENST00000479080 CRTAPO75718 401 aaPredicted RBP10.98□□□□□ -0.65
CHD3-210ENST00000479080 F12P00748 615 aaPredicted RBP10.98□□□□□ -0.65
CHD3-210ENST00000479080 DAOP14920 347 aa10.98□□□□□ -0.65
CHD3-210ENST00000479080 PRKACAP17612 351 aa10.98□□□□□ -0.65
CHD3-210ENST00000479080 RAB6AP20340 208 aa10.98□□□□□ -0.65
CHD3-210ENST00000479080 DUSP1P28562 367 aa10.98□□□□□ -0.65
CHD3-210ENST00000479080 EFNA4P52798 201 aa10.98□□□□□ -0.65
CHD3-210ENST00000479080 TMEM50BP56557 158 aa10.98□□□□□ -0.65
CHD3-210ENST00000479080 MADCAM1Q13477 382 aa10.98□□□□□ -0.65
CHD3-210ENST00000479080 RSU1Q15404 277 aa10.98□□□□□ -0.65
CHD3-210ENST00000479080 TEX36Q5VZQ5 186 aa10.98□□□□□ -0.65
CHD3-210ENST00000479080 Q6P435 159 aa10.98□□□□□ -0.65
CHD3-210ENST00000479080 FAM90A1Q86YD7 464 aa10.98□□□□□ -0.65
CHD3-210ENST00000479080 FAM58AQ8N1B3 248 aa10.98□□□□□ -0.65
CHD3-210ENST00000479080 OSR2Q8N2R0 312 aa10.98□□□□□ -0.65
CHD3-210ENST00000479080 FAM89BQ8N5H3 189 aa10.98□□□□□ -0.65
CHD3-210ENST00000479080 BOLLQ8N9W6 283 aaKnown RBP10.98□□□□□ -0.65
CHD3-210ENST00000479080 CCL17Q92583 94 aa10.98□□□□□ -0.65
CHD3-210ENST00000479080 RDH5Q92781 318 aa10.98□□□□□ -0.65
CHD3-210ENST00000479080 EMG1Q92979 244 aaKnown RBP10.98□□□□□ -0.65
CHD3-210ENST00000479080 PTX4Q96A99 478 aa10.98□□□□□ -0.65
CHD3-210ENST00000479080 WDFY2Q96P53 400 aa10.98□□□□□ -0.65
CHD3-210ENST00000479080 TMEM59Q9BXS4 323 aa10.98□□□□□ -0.65
CHD3-210ENST00000479080 ABCG5Q9H222 651 aa10.98□□□□□ -0.65
CHD3-210ENST00000479080 AKAP6Q13023 2319 aa10.98□□□□□ -0.65
CHD3-210ENST00000479080 USF3Q68DE3 2245 aa10.97□□□□□ -0.65
CHD3-210ENST00000479080 GEMIN2O14893 280 aaKnown RBP10.97□□□□□ -0.65
CHD3-210ENST00000479080 SOCS1O15524 211 aa10.97□□□□□ -0.65
CHD3-210ENST00000479080 IGHV2-70P01814 119 aa10.97□□□□□ -0.65
CHD3-210ENST00000479080 GLRA1P23415 457 aa10.97□□□□□ -0.65
CHD3-210ENST00000479080 TNFSF8P32971 234 aa10.97□□□□□ -0.65
CHD3-210ENST00000479080 PTH2RP49190 550 aa10.97□□□□□ -0.65
CHD3-210ENST00000479080 MRPS11P82912 194 aaKnown RBP10.97□□□□□ -0.65
CHD3-210ENST00000479080 ZMYND11Q15326 602 aa10.97□□□□□ -0.65
CHD3-210ENST00000479080 TAF9Q16594 264 aa10.97□□□□□ -0.65
CHD3-210ENST00000479080 UBE2NLQ5JXB2 153 aa10.97□□□□□ -0.65
CHD3-210ENST00000479080 STUMQ69YW2 141 aa10.97□□□□□ -0.65
CHD3-210ENST00000479080 SFRP4Q6FHJ7 346 aaPredicted RBP10.97□□□□□ -0.65
CHD3-210ENST00000479080 CCDC190Q86UF4 302 aa10.97□□□□□ -0.65
CHD3-210ENST00000479080 CDH24Q86UP0 819 aa10.97□□□□□ -0.65
CHD3-210ENST00000479080 IZUMO1Q8IYV9 350 aa10.97□□□□□ -0.65
CHD3-210ENST00000479080 MFSD4AQ8N468 514 aa10.97□□□□□ -0.65
CHD3-210ENST00000479080 CD177Q8N6Q3 437 aa10.97□□□□□ -0.65
CHD3-210ENST00000479080 ZNF525Q8N782 197 aa10.97□□□□□ -0.65
CHD3-210ENST00000479080 OR4M1Q8NGD0 313 aa10.97□□□□□ -0.65
CHD3-210ENST00000479080 KCNG3Q8TAE7 436 aa10.97□□□□□ -0.65
CHD3-210ENST00000479080 AP3S1Q92572 193 aa10.97□□□□□ -0.65
CHD3-210ENST00000479080 SOSTQ9BQB4 213 aa10.97□□□□□ -0.65
CHD3-210ENST00000479080 MRI1Q9BV20 369 aa10.97□□□□□ -0.65
CHD3-210ENST00000479080 SELENOIQ9C0D9 397 aa10.97□□□□□ -0.65
CHD3-210ENST00000479080 CST11Q9H112 138 aa10.97□□□□□ -0.65
CHD3-210ENST00000479080 RAB22AQ9UL26 194 aa10.97□□□□□ -0.65
CHD3-210ENST00000479080 V9GYH0 126 aa10.97□□□□□ -0.65
CHD3-210ENST00000479080 TACC2O95359 2948 aa10.97□□□□□ -0.65
CHD3-210ENST00000479080 APCP25054 2843 aa10.96□□□□□ -0.65
CHD3-210ENST00000479080 ZNF780AO75290 641 aaPredicted RBP10.96□□□□□ -0.65
CHD3-210ENST00000479080 NXPH2O95156 264 aa10.96□□□□□ -0.65
CHD3-210ENST00000479080 APOA1P02647 267 aa10.96□□□□□ -0.65
CHD3-210ENST00000479080 INHBBP09529 407 aa10.96□□□□□ -0.65
CHD3-210ENST00000479080 PSG2P11465 335 aa10.96□□□□□ -0.65
CHD3-210ENST00000479080 GTF2F2P13984 249 aa10.96□□□□□ -0.65
CHD3-210ENST00000479080 SELLP14151 372 aa10.96□□□□□ -0.65
CHD3-210ENST00000479080 CDK2P24941 298 aa10.96□□□□□ -0.65
CHD3-210ENST00000479080 IL13RA2Q14627 380 aa10.96□□□□□ -0.65
CHD3-210ENST00000479080 ZNF146Q15072 292 aa10.96□□□□□ -0.65
CHD3-210ENST00000479080 PLAC9Q5JTB6 97 aa10.96□□□□□ -0.65
CHD3-210ENST00000479080 MZT2AQ6P582 158 aa10.96□□□□□ -0.65
CHD3-210ENST00000479080 CNIH2Q6PI25 160 aa10.96□□□□□ -0.65
CHD3-210ENST00000479080 DNM1P46Q6ZS02 220 aa10.96□□□□□ -0.65
CHD3-210ENST00000479080 KRTAP1-3Q8IUG1 177 aa10.96□□□□□ -0.65
CHD3-210ENST00000479080 Q8IYB0 196 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms