RNA–Protein interactions for RNA: ENST00000477561.5

HDAC6-221, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-221ENST00000477561 LSAMPQ13449 338 aa6.88□□□□□ -1.31
HDAC6-221ENST00000477561 KCNJ8Q15842 424 aa6.88□□□□□ -1.31
HDAC6-221ENST00000477561 DUX4L9Q6RFH8 374 aaPredicted RBP6.88□□□□□ -1.31
HDAC6-221ENST00000477561 BTNL3Q6UXE8 466 aa6.88□□□□□ -1.31
HDAC6-221ENST00000477561 UNQ9370/PRO34162Q6UXP9 181 aa6.88□□□□□ -1.31
HDAC6-221ENST00000477561 ELMOD2Q8IZ81 293 aa6.88□□□□□ -1.31
HDAC6-221ENST00000477561 FGFRL1Q8N441 504 aa6.88□□□□□ -1.31
HDAC6-221ENST00000477561 BPIFB2Q8N4F0 458 aa6.88□□□□□ -1.31
HDAC6-221ENST00000477561 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.88□□□□□ -1.31
HDAC6-221ENST00000477561 SCCPDHQ8NBX0 429 aa6.88□□□□□ -1.31
HDAC6-221ENST00000477561 CCDC54Q8NEL0 328 aa6.88□□□□□ -1.31
HDAC6-221ENST00000477561 SEMA6DQ8NFY4 1073 aa6.88□□□□□ -1.31
HDAC6-221ENST00000477561 TSEN15Q8WW01 171 aaKnown RBP6.88□□□□□ -1.31
HDAC6-221ENST00000477561 HPSE2Q8WWQ2 592 aa6.88□□□□□ -1.31
HDAC6-221ENST00000477561 CCL13Q99616 98 aa6.88□□□□□ -1.31
HDAC6-221ENST00000477561 RTL8AQ9BWD3 113 aa6.88□□□□□ -1.31
HDAC6-221ENST00000477561 WDR13Q9H1Z4 485 aa6.88□□□□□ -1.31
HDAC6-221ENST00000477561 MMP27Q9H306 513 aa6.88□□□□□ -1.31
HDAC6-221ENST00000477561 RNF167Q9H6Y7 350 aa6.88□□□□□ -1.31
HDAC6-221ENST00000477561 SMURF1Q9HCE7 757 aa6.88□□□□□ -1.31
HDAC6-221ENST00000477561 SNTG1Q9NSN8 517 aa6.88□□□□□ -1.31
HDAC6-221ENST00000477561 DUX4Q9UBX2 424 aa6.88□□□□□ -1.31
HDAC6-221ENST00000477561 ZNF69Q9UC07 566 aa6.88□□□□□ -1.31
HDAC6-221ENST00000477561 NUFIP1Q9UHK0 495 aaKnown RBP6.88□□□□□ -1.31
HDAC6-221ENST00000477561 ZNF391Q9UJN7 358 aa6.88□□□□□ -1.31
HDAC6-221ENST00000477561 HHLA2Q9UM44 414 aa6.88□□□□□ -1.31
HDAC6-221ENST00000477561 DHDHQ9UQ10 334 aa6.88□□□□□ -1.31
HDAC6-221ENST00000477561 SLC22A13Q9Y226 551 aa6.88□□□□□ -1.31
HDAC6-221ENST00000477561 PIGLQ9Y2B2 252 aa6.88□□□□□ -1.31
HDAC6-221ENST00000477561 SOX21Q9Y651 276 aaPredicted RBP6.88□□□□□ -1.31
HDAC6-221ENST00000477561 ZNF816-ZNF321PA0A0X1KG74 233 aa6.87□□□□□ -1.31
HDAC6-221ENST00000477561 KIR2DS1A0A191URI9 304 aa6.87□□□□□ -1.31
HDAC6-221ENST00000477561 A0A1B0GVI7 797 aa6.87□□□□□ -1.31
HDAC6-221ENST00000477561 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.87□□□□□ -1.31
HDAC6-221ENST00000477561 DVL1O14640 695 aa6.87□□□□□ -1.31
HDAC6-221ENST00000477561 TMPRSS2O15393 492 aa6.87□□□□□ -1.31
HDAC6-221ENST00000477561 AKR7A2O43488 359 aa6.87□□□□□ -1.31
HDAC6-221ENST00000477561 TMEM127O75204 238 aa6.87□□□□□ -1.31
HDAC6-221ENST00000477561 FCN3O75636 299 aa6.87□□□□□ -1.31
HDAC6-221ENST00000477561 RHBDL1O75783 438 aa6.87□□□□□ -1.31
HDAC6-221ENST00000477561 IGLV3-1P01715 115 aa6.87□□□□□ -1.31
HDAC6-221ENST00000477561 CD2P06729 351 aa6.87□□□□□ -1.31
HDAC6-221ENST00000477561 IGHV4-38-2P0DP08 117 aa6.87□□□□□ -1.31
HDAC6-221ENST00000477561 CPT2P23786 658 aa6.87□□□□□ -1.31
HDAC6-221ENST00000477561 FPR2P25090 351 aa6.87□□□□□ -1.31
HDAC6-221ENST00000477561 SDC2P34741 201 aa6.87□□□□□ -1.31
HDAC6-221ENST00000477561 RPS19P39019 145 aaKnown RBP6.87□□□□□ -1.31
HDAC6-221ENST00000477561 RPS11P62280 158 aaKnown RBP eCLIP6.87□□□□□ -1.31
HDAC6-221ENST00000477561 MICBQ29980 383 aa6.87□□□□□ -1.31
HDAC6-221ENST00000477561 TEX36Q5VZQ5 186 aa6.87□□□□□ -1.31
HDAC6-221ENST00000477561 PLCXD3Q63HM9 321 aa6.87□□□□□ -1.31
HDAC6-221ENST00000477561 SIGLECL1Q8N7X8 197 aa6.87□□□□□ -1.31
HDAC6-221ENST00000477561 OR13C5Q8NGS8 318 aa6.87□□□□□ -1.31
HDAC6-221ENST00000477561 MCFD2Q8NI22 146 aa6.87□□□□□ -1.31
HDAC6-221ENST00000477561 ST8SIA4Q92187 359 aa6.87□□□□□ -1.31
HDAC6-221ENST00000477561 SLC25A46Q96AG3 418 aa6.87□□□□□ -1.31
HDAC6-221ENST00000477561 DACT3Q96B18 629 aaPredicted RBP6.87□□□□□ -1.31
HDAC6-221ENST00000477561 DERL3Q96Q80 235 aa6.87□□□□□ -1.31
HDAC6-221ENST00000477561 OR14A2Q96R54 314 aa6.87□□□□□ -1.31
HDAC6-221ENST00000477561 SUCNR1Q9BXA5 334 aa6.87□□□□□ -1.31
HDAC6-221ENST00000477561 SLIRPQ9GZT3 109 aaKnown RBP6.87□□□□□ -1.31
HDAC6-221ENST00000477561 NXF2Q9GZY0 626 aaKnown RBP6.87□□□□□ -1.31
HDAC6-221ENST00000477561 TLNRD1Q9H1K6 362 aa6.87□□□□□ -1.31
HDAC6-221ENST00000477561 TCF7L1Q9HCS4 588 aa6.87□□□□□ -1.31
HDAC6-221ENST00000477561 GPR173Q9NS66 373 aa6.87□□□□□ -1.31
HDAC6-221ENST00000477561 CKLFQ9UBR5 152 aa6.87□□□□□ -1.31
HDAC6-221ENST00000477561 NUP50Q9UKX7 468 aa6.87□□□□□ -1.31
HDAC6-221ENST00000477561 WNK2Q9Y3S1 2297 aa6.87□□□□□ -1.31
HDAC6-221ENST00000477561 A0A075B6Q4 140 aa6.86□□□□□ -1.31
HDAC6-221ENST00000477561 TRAV40A0A0B4J280 105 aa6.86□□□□□ -1.31
HDAC6-221ENST00000477561 A0A1B0GTI1 187 aa6.86□□□□□ -1.31
HDAC6-221ENST00000477561 LOC107986453A0A1B0GWG9 222 aa6.86□□□□□ -1.31
HDAC6-221ENST00000477561 TMEM210A6NLX4 147 aa6.86□□□□□ -1.31
HDAC6-221ENST00000477561 SRRM5B3KS81 715 aa6.86□□□□□ -1.31
HDAC6-221ENST00000477561 SYT7O43581 403 aa6.86□□□□□ -1.31
HDAC6-221ENST00000477561 NDUFA2O43678 99 aa6.86□□□□□ -1.31
HDAC6-221ENST00000477561 MTRF1O75570 445 aaKnown RBP6.86□□□□□ -1.31
HDAC6-221ENST00000477561 DHRS3O75911 302 aa6.86□□□□□ -1.31
HDAC6-221ENST00000477561 NRASP01111 189 aa6.86□□□□□ -1.31
HDAC6-221ENST00000477561 SFTPBP07988 381 aa6.86□□□□□ -1.31
HDAC6-221ENST00000477561 SELLP14151 372 aa6.86□□□□□ -1.31
HDAC6-221ENST00000477561 AMY2BP19961 511 aa6.86□□□□□ -1.31
HDAC6-221ENST00000477561 RAB3BP20337 219 aa6.86□□□□□ -1.31
HDAC6-221ENST00000477561 S100A5P33763 92 aa6.86□□□□□ -1.31
HDAC6-221ENST00000477561 SOX2P48431 317 aa6.86□□□□□ -1.31
HDAC6-221ENST00000477561 NPY4RP50391 375 aa6.86□□□□□ -1.31
HDAC6-221ENST00000477561 PSMD7P51665 324 aa6.86□□□□□ -1.31
HDAC6-221ENST00000477561 HILS1P60008 231 aa6.86□□□□□ -1.31
HDAC6-221ENST00000477561 FGF12P61328 243 aa6.86□□□□□ -1.31
HDAC6-221ENST00000477561 MXD1Q05195 221 aa6.86□□□□□ -1.31
HDAC6-221ENST00000477561 IKZF1Q13422 519 aa6.86□□□□□ -1.31
HDAC6-221ENST00000477561 INSL4Q14641 139 aa6.86□□□□□ -1.31
HDAC6-221ENST00000477561 CEACAM21Q3KPI0 293 aa6.86□□□□□ -1.31
HDAC6-221ENST00000477561 FAM76BQ5HYJ3 339 aa6.86□□□□□ -1.31
HDAC6-221ENST00000477561 CD276Q5ZPR3 534 aa6.86□□□□□ -1.31
HDAC6-221ENST00000477561 BTN2A1Q7KYR7 527 aa6.86□□□□□ -1.31
HDAC6-221ENST00000477561 DOK3Q7L591 496 aa6.86□□□□□ -1.31
HDAC6-221ENST00000477561 RDH10Q8IZV5 341 aa6.86□□□□□ -1.31
HDAC6-221ENST00000477561 BATF2Q8N1L9 274 aa6.86□□□□□ -1.31
HDAC6-221ENST00000477561 FAM216BQ8N7L0 139 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms