RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 SLC17A2O00624 439 aa12.83□□□□□ -0.36
SEC13-215ENST00000477547 PRKACAP17612 351 aa12.83□□□□□ -0.36
SEC13-215ENST00000477547 SERPINA2P20848 420 aa12.83□□□□□ -0.36
SEC13-215ENST00000477547 NPBWR2P48146 333 aa12.83□□□□□ -0.36
SEC13-215ENST00000477547 ERVK11-1P61568 191 aa12.83□□□□□ -0.36
SEC13-215ENST00000477547 VBP1P61758 197 aa12.83□□□□□ -0.36
SEC13-215ENST00000477547 RSU1Q15404 277 aa12.83□□□□□ -0.36
SEC13-215ENST00000477547 RAB11BQ15907 218 aa12.83□□□□□ -0.36
SEC13-215ENST00000477547 MICBQ29980 383 aa12.83□□□□□ -0.36
SEC13-215ENST00000477547 TMEM155Q4W5P6 130 aa12.83□□□□□ -0.36
SEC13-215ENST00000477547 C1orf100Q5SVJ3 147 aa12.83□□□□□ -0.36
SEC13-215ENST00000477547 TEX36Q5VZQ5 186 aa12.83□□□□□ -0.36
SEC13-215ENST00000477547 FIP1L1Q6UN15 594 aaKnown RBP12.83□□□□□ -0.36
SEC13-215ENST00000477547 CLEC9AQ6UXN8 241 aa12.83□□□□□ -0.36
SEC13-215ENST00000477547 ACP7Q6ZNF0 438 aa12.83□□□□□ -0.36
SEC13-215ENST00000477547 C1QL2Q7Z5L3 287 aa12.83□□□□□ -0.36
SEC13-215ENST00000477547 TPRA1Q86W33 373 aa12.83□□□□□ -0.36
SEC13-215ENST00000477547 FAM90A1Q86YD7 464 aa12.83□□□□□ -0.36
SEC13-215ENST00000477547 OR10K1Q8NGX5 313 aa12.83□□□□□ -0.36
SEC13-215ENST00000477547 HES4Q9HCC6 221 aa12.83□□□□□ -0.36
SEC13-215ENST00000477547 RASL12Q9NYN1 266 aa12.83□□□□□ -0.36
SEC13-215ENST00000477547 ING4Q9UNL4 249 aa12.83□□□□□ -0.36
SEC13-215ENST00000477547 IGHV4-61A0A0C4DH41 118 aa12.82□□□□□ -0.36
SEC13-215ENST00000477547 NKX6-3A6NJ46 265 aa12.82□□□□□ -0.36
SEC13-215ENST00000477547 RNF223E7ERA6 249 aa12.82□□□□□ -0.36
SEC13-215ENST00000477547 FSTL3O95633 263 aa12.82□□□□□ -0.36
SEC13-215ENST00000477547 GYPAP02724 150 aa12.82□□□□□ -0.36
SEC13-215ENST00000477547 SFTPBP07988 381 aa12.82□□□□□ -0.36
SEC13-215ENST00000477547 ACAA1P09110 424 aaPredicted RBP12.82□□□□□ -0.36
SEC13-215ENST00000477547 CALCBP10092 127 aa12.82□□□□□ -0.36
SEC13-215ENST00000477547 MUC1P15941 1255 aaPredicted RBP12.82□□□□□ -0.36
SEC13-215ENST00000477547 HTR2CP28335 458 aa12.82□□□□□ -0.36
SEC13-215ENST00000477547 SERPINB10P48595 397 aa12.82□□□□□ -0.36
SEC13-215ENST00000477547 PSMD7P51665 324 aa12.82□□□□□ -0.36
SEC13-215ENST00000477547 SNU13P55769 128 aaKnown RBP12.82□□□□□ -0.36
SEC13-215ENST00000477547 BLMHQ13867 455 aa12.82□□□□□ -0.36
SEC13-215ENST00000477547 KCNJ8Q15842 424 aa12.82□□□□□ -0.36
SEC13-215ENST00000477547 CTF1Q16619 201 aa12.82□□□□□ -0.36
SEC13-215ENST00000477547 DGUOKQ16854 277 aa12.82□□□□□ -0.36
SEC13-215ENST00000477547 HES5Q5TA89 166 aa12.82□□□□□ -0.36
SEC13-215ENST00000477547 STUMQ69YW2 141 aa12.82□□□□□ -0.36
SEC13-215ENST00000477547 GLIPR1L1Q6UWM5 242 aa12.82□□□□□ -0.36
SEC13-215ENST00000477547 NR2C2APQ86WQ0 139 aa12.82□□□□□ -0.36
SEC13-215ENST00000477547 FAM58AQ8N1B3 248 aa12.82□□□□□ -0.36
SEC13-215ENST00000477547 CLDND2Q8NHS1 167 aa12.82□□□□□ -0.36
SEC13-215ENST00000477547 TBC1D15Q8TC07 691 aa12.82□□□□□ -0.36
SEC13-215ENST00000477547 C12orf43Q96C57 262 aaKnown RBP12.82□□□□□ -0.36
SEC13-215ENST00000477547 C18orf12Q96KH6 178 aa12.82□□□□□ -0.36
SEC13-215ENST00000477547 TMEM246Q9BRR3 403 aa12.82□□□□□ -0.36
SEC13-215ENST00000477547 METTL9Q9H1A3 318 aa12.82□□□□□ -0.36
SEC13-215ENST00000477547 IL36GQ9NZH8 169 aa12.82□□□□□ -0.36
SEC13-215ENST00000477547 IL36RNQ9UBH0 155 aa12.82□□□□□ -0.36
SEC13-215ENST00000477547 A0A0G2JK05 382 aa12.81□□□□□ -0.36
SEC13-215ENST00000477547 OR2AT4A6NND4 320 aa12.81□□□□□ -0.36
SEC13-215ENST00000477547 CEACAM18A8MTB9 384 aa12.81□□□□□ -0.36
SEC13-215ENST00000477547 SLC22A1O15245 554 aa12.81□□□□□ -0.36
SEC13-215ENST00000477547 HTR3BO95264 441 aa12.81□□□□□ -0.36
SEC13-215ENST00000477547 KNG1P01042 644 aa12.81□□□□□ -0.36
SEC13-215ENST00000477547 CSTBP04080 98 aaKnown RBP12.81□□□□□ -0.36
SEC13-215ENST00000477547 INHBBP09529 407 aa12.81□□□□□ -0.36
SEC13-215ENST00000477547 CLEC2LP0C7M8 214 aa12.81□□□□□ -0.36
SEC13-215ENST00000477547 RPS2P15880 293 aaKnown RBP12.81□□□□□ -0.36
SEC13-215ENST00000477547 USF1P22415 310 aaPredicted RBP12.81□□□□□ -0.36
SEC13-215ENST00000477547 P2RY14Q15391 338 aa12.81□□□□□ -0.36
SEC13-215ENST00000477547 SLC22A6Q4U2R8 563 aa12.81□□□□□ -0.36
SEC13-215ENST00000477547 ASCL4Q6XD76 172 aa12.81□□□□□ -0.36
SEC13-215ENST00000477547 DCDC5Q6ZRR9 648 aa12.81□□□□□ -0.36
SEC13-215ENST00000477547 LRRC28Q86X40 367 aaPredicted RBP12.81□□□□□ -0.36
SEC13-215ENST00000477547 RAB2BQ8WUD1 216 aa12.81□□□□□ -0.36
SEC13-215ENST00000477547 C1orf147Q96MC9 270 aaPredicted RBP12.81□□□□□ -0.36
SEC13-215ENST00000477547 KCNK15Q9H427 330 aa12.81□□□□□ -0.36
SEC13-215ENST00000477547 RHOFQ9HBH0 211 aa12.81□□□□□ -0.36
SEC13-215ENST00000477547 TMEM165Q9HC07 324 aa12.81□□□□□ -0.36
SEC13-215ENST00000477547 OR14J1Q9UGF5 321 aa12.81□□□□□ -0.36
SEC13-215ENST00000477547 PCDHB10Q9UN67 800 aa12.81□□□□□ -0.36
SEC13-215ENST00000477547 FBN1P35555 2871 aaKnown RBP12.8□□□□□ -0.36
SEC13-215ENST00000477547 DSCAML1Q8TD84 2053 aa12.8□□□□□ -0.36
SEC13-215ENST00000477547 A0A096LNT2 108 aa12.8□□□□□ -0.36
SEC13-215ENST00000477547 A0A1W2PP11 408 aa12.8□□□□□ -0.36
SEC13-215ENST00000477547 CCDC160A6NGH7 325 aa12.8□□□□□ -0.36
SEC13-215ENST00000477547 IFITM5A6NNB3 132 aa12.8□□□□□ -0.36
SEC13-215ENST00000477547 NOTOA8MTQ0 251 aa12.8□□□□□ -0.36
SEC13-215ENST00000477547 AIPO00170 330 aa12.8□□□□□ -0.36
SEC13-215ENST00000477547 ZNF780AO75290 641 aaPredicted RBP12.8□□□□□ -0.36
SEC13-215ENST00000477547 BPNT1O95861 308 aa12.8□□□□□ -0.36
SEC13-215ENST00000477547 IL1AP01583 271 aa12.8□□□□□ -0.36
SEC13-215ENST00000477547 TFF1P04155 84 aa12.8□□□□□ -0.36
SEC13-215ENST00000477547 UBBP0CG47 229 aa12.8□□□□□ -0.36
SEC13-215ENST00000477547 CD37P11049 281 aa12.8□□□□□ -0.36
SEC13-215ENST00000477547 CEBPDP49716 269 aaPredicted RBP12.8□□□□□ -0.36
SEC13-215ENST00000477547 BMXP51813 675 aa12.8□□□□□ -0.36
SEC13-215ENST00000477547 CAV3P56539 151 aa12.8□□□□□ -0.36
SEC13-215ENST00000477547 CLDN12P56749 244 aa12.8□□□□□ -0.36
SEC13-215ENST00000477547 FGF12P61328 243 aa12.8□□□□□ -0.36
SEC13-215ENST00000477547 SPIN3Q5JUX0 258 aa12.8□□□□□ -0.36
SEC13-215ENST00000477547 FAM166AQ6J272 317 aa12.8□□□□□ -0.36
SEC13-215ENST00000477547 SFXN4Q6P4A7 337 aa12.8□□□□□ -0.36
SEC13-215ENST00000477547 OR5T2Q8NGG2 359 aa12.8□□□□□ -0.36
SEC13-215ENST00000477547 RAB39BQ96DA2 213 aa12.8□□□□□ -0.36
SEC13-215ENST00000477547 BCL7BQ9BQE9 202 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms