RNA–Protein interactions for RNA: ENST00000477520.1

PTCD3-212, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 556 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-212ENST00000477520 MED31Q9Y3C7 131 aa4.13□□□□□ -1.75
PTCD3-212ENST00000477520 WIPI2Q9Y4P8 454 aa4.13□□□□□ -1.75
PTCD3-212ENST00000477520 WSB1Q9Y6I7 421 aa4.13□□□□□ -1.75
PTCD3-212ENST00000477520 COX11Q9Y6N1 276 aa4.13□□□□□ -1.75
PTCD3-212ENST00000477520 ZNF106Q9H2Y7 1883 aaKnown RBP4.13□□□□□ -1.75
PTCD3-212ENST00000477520 CHD5Q8TDI0 1954 aa4.13□□□□□ -1.75
PTCD3-212ENST00000477520 NOTCH4Q99466 2003 aa4.12□□□□□ -1.75
PTCD3-212ENST00000477520 IGHV2OR16-5A0A0B4J2B6 119 aa4.12□□□□□ -1.75
PTCD3-212ENST00000477520 OR6C6A6NF89 314 aa4.12□□□□□ -1.75
PTCD3-212ENST00000477520 H0Y8G0 127 aa4.12□□□□□ -1.75
PTCD3-212ENST00000477520 H0YIZ8 118 aa4.12□□□□□ -1.75
PTCD3-212ENST00000477520 ZNF561-AS1K7EIQ3 104 aa4.12□□□□□ -1.75
PTCD3-212ENST00000477520 COCHO43405 550 aa4.12□□□□□ -1.75
PTCD3-212ENST00000477520 PRAMEF4O60810 478 aa4.12□□□□□ -1.75
PTCD3-212ENST00000477520 RAMP3O60896 148 aa4.12□□□□□ -1.75
PTCD3-212ENST00000477520 SCAF4O95104 1147 aaKnown RBP4.12□□□□□ -1.75
PTCD3-212ENST00000477520 SEMA4FO95754 770 aa4.12□□□□□ -1.75
PTCD3-212ENST00000477520 C1QCP02747 245 aa4.12□□□□□ -1.75
PTCD3-212ENST00000477520 REG1AP05451 166 aa4.12□□□□□ -1.75
PTCD3-212ENST00000477520 MMP7P09237 267 aaPredicted RBP4.12□□□□□ -1.75
PTCD3-212ENST00000477520 PIRTP0C851 137 aa4.12□□□□□ -1.75
PTCD3-212ENST00000477520 PGA4P0DJD7 388 aa4.12□□□□□ -1.75
PTCD3-212ENST00000477520 PGA3P0DJD8 388 aa4.12□□□□□ -1.75
PTCD3-212ENST00000477520 PGA5P0DJD9 388 aa4.12□□□□□ -1.75
PTCD3-212ENST00000477520 OR13C7P0DN81 318 aa4.12□□□□□ -1.75
PTCD3-212ENST00000477520 LAMP2P13473 410 aa4.12□□□□□ -1.75
PTCD3-212ENST00000477520 CEACAM1P13688 526 aa4.12□□□□□ -1.75
PTCD3-212ENST00000477520 CD99P14209 185 aa4.12□□□□□ -1.75
PTCD3-212ENST00000477520 MMP9P14780 707 aa4.12□□□□□ -1.75
PTCD3-212ENST00000477520 CD22P20273 847 aa4.12□□□□□ -1.75
PTCD3-212ENST00000477520 HOXD9P28356 352 aaPredicted RBP4.12□□□□□ -1.75
PTCD3-212ENST00000477520 TLX1P31314 330 aaPredicted RBP4.12□□□□□ -1.75
PTCD3-212ENST00000477520 APLNRP35414 380 aa4.12□□□□□ -1.75
PTCD3-212ENST00000477520 CEACAM3P40198 252 aa4.12□□□□□ -1.75
PTCD3-212ENST00000477520 CAPZBP47756 277 aa4.12□□□□□ -1.75
PTCD3-212ENST00000477520 THBS3P49746 956 aa4.12□□□□□ -1.75
PTCD3-212ENST00000477520 CNN1P51911 297 aaKnown RBP4.12□□□□□ -1.75
PTCD3-212ENST00000477520 SLC25A1P53007 311 aa4.12□□□□□ -1.75
PTCD3-212ENST00000477520 SLC16A1P53985 500 aa4.12□□□□□ -1.75
PTCD3-212ENST00000477520 TMEM33P57088 247 aa4.12□□□□□ -1.75
PTCD3-212ENST00000477520 NTHL1P78549 312 aa4.12□□□□□ -1.75
PTCD3-212ENST00000477520 ZXDBP98169 803 aa4.12□□□□□ -1.75
PTCD3-212ENST00000477520 NHLH1Q02575 133 aa4.12□□□□□ -1.75
PTCD3-212ENST00000477520 CRMP1Q14194 572 aa4.12□□□□□ -1.75
PTCD3-212ENST00000477520 TGIF1Q15583 401 aa4.12□□□□□ -1.75
PTCD3-212ENST00000477520 COX19Q49B96 90 aa4.12□□□□□ -1.75
PTCD3-212ENST00000477520 OCIAD2Q56VL3 154 aa4.12□□□□□ -1.75
PTCD3-212ENST00000477520 C1orf100Q5SVJ3 147 aa4.12□□□□□ -1.75
PTCD3-212ENST00000477520 ZNF684Q5T5D7 378 aa4.12□□□□□ -1.75
PTCD3-212ENST00000477520 GFI1BQ5VTD9 330 aa4.12□□□□□ -1.75
PTCD3-212ENST00000477520 PRAMEF9Q5VWM5 478 aa4.12□□□□□ -1.75
PTCD3-212ENST00000477520 TXNDC8Q6A555 127 aa4.12□□□□□ -1.75
PTCD3-212ENST00000477520 PRR27Q6MZM9 219 aa4.12□□□□□ -1.75
PTCD3-212ENST00000477520 TEX38Q6PEX7 206 aa4.12□□□□□ -1.75
PTCD3-212ENST00000477520 SLC16A9Q7RTY1 509 aa4.12□□□□□ -1.75
PTCD3-212ENST00000477520 CLDN19Q8N6F1 224 aa4.12□□□□□ -1.75
PTCD3-212ENST00000477520 TCTEX1D1Q8N7M0 179 aa4.12□□□□□ -1.75
PTCD3-212ENST00000477520 PNPLA1Q8N8W4 532 aa4.12□□□□□ -1.75
PTCD3-212ENST00000477520 APCDD1LQ8NCL9 501 aa4.12□□□□□ -1.75
PTCD3-212ENST00000477520 OR2I1PQ8NGU4 316 aa4.12□□□□□ -1.75
PTCD3-212ENST00000477520 OR8S1Q8NH09 359 aa4.12□□□□□ -1.75
PTCD3-212ENST00000477520 OR5AK3PQ8NH89 298 aa4.12□□□□□ -1.75
PTCD3-212ENST00000477520 ZCCHC10Q8TBK6 192 aa4.12□□□□□ -1.75
PTCD3-212ENST00000477520 TMEM239Q8WW34 195 aa4.12□□□□□ -1.75
PTCD3-212ENST00000477520 SUSD6Q92537 303 aa4.12□□□□□ -1.75
PTCD3-212ENST00000477520 CDS1Q92903 461 aa4.12□□□□□ -1.75
PTCD3-212ENST00000477520 FGF13Q92913 245 aa4.12□□□□□ -1.75
PTCD3-212ENST00000477520 TSLPQ969D9 159 aa4.12□□□□□ -1.75
PTCD3-212ENST00000477520 FAM46BQ96A09 425 aa4.12□□□□□ -1.75
PTCD3-212ENST00000477520 SNX22Q96L94 193 aa4.12□□□□□ -1.75
PTCD3-212ENST00000477520 MS4A10Q96PG2 267 aa4.12□□□□□ -1.75
PTCD3-212ENST00000477520 TBX5Q99593 518 aa4.12□□□□□ -1.75
PTCD3-212ENST00000477520 CMKLR1Q99788 373 aa4.12□□□□□ -1.75
PTCD3-212ENST00000477520 SLC6A7Q99884 636 aa4.12□□□□□ -1.75
PTCD3-212ENST00000477520 C20orf24Q9BUV8 137 aa4.12□□□□□ -1.75
PTCD3-212ENST00000477520 PHF7Q9BWX1 381 aaPredicted RBP4.12□□□□□ -1.75
PTCD3-212ENST00000477520 SLC46A2Q9BY10 475 aa4.12□□□□□ -1.75
PTCD3-212ENST00000477520 NMNAT2Q9BZQ4 307 aa4.12□□□□□ -1.75
PTCD3-212ENST00000477520 MKKSQ9NPJ1 570 aaPredicted RBP4.12□□□□□ -1.75
PTCD3-212ENST00000477520 GPR84Q9NQS5 396 aa4.12□□□□□ -1.75
PTCD3-212ENST00000477520 SIRT3Q9NTG7 399 aaPredicted RBP4.12□□□□□ -1.75
PTCD3-212ENST00000477520 SLC35D1Q9NTN3 355 aa4.12□□□□□ -1.75
PTCD3-212ENST00000477520 TMEM106BQ9NUM4 274 aa4.12□□□□□ -1.75
PTCD3-212ENST00000477520 HCFC1R1Q9NWW0 138 aa4.12□□□□□ -1.75
PTCD3-212ENST00000477520 OBP2AQ9NY56 170 aa4.12□□□□□ -1.75
PTCD3-212ENST00000477520 CISD1Q9NZ45 108 aaKnown RBP4.12□□□□□ -1.75
PTCD3-212ENST00000477520 FLRT3Q9NZU0 649 aa4.12□□□□□ -1.75
PTCD3-212ENST00000477520 FBXL17Q9UF56 701 aa4.12□□□□□ -1.75
PTCD3-212ENST00000477520 SMPXQ9UHP9 88 aa4.12□□□□□ -1.75
PTCD3-212ENST00000477520 ZNF223Q9UK11 482 aaPredicted RBP4.12□□□□□ -1.75
PTCD3-212ENST00000477520 FBXO4Q9UKT5 387 aa4.12□□□□□ -1.75
PTCD3-212ENST00000477520 ANAPC10Q9UM13 185 aa4.12□□□□□ -1.75
PTCD3-212ENST00000477520 HS3ST3B1Q9Y662 390 aa4.12□□□□□ -1.75
PTCD3-212ENST00000477520 OBSL1O75147 1896 aa4.11□□□□□ -1.75
PTCD3-212ENST00000477520 TTC28Q96AY4 2481 aa4.11□□□□□ -1.75
PTCD3-212ENST00000477520 MSGN1A6NI15 193 aa4.11□□□□□ -1.75
PTCD3-212ENST00000477520 CPSF4LA6NMK7 179 aaKnown RBP4.11□□□□□ -1.75
PTCD3-212ENST00000477520 ZNF705FA8MVS1 300 aaPredicted RBP4.11□□□□□ -1.75
PTCD3-212ENST00000477520 ZNF732B4DXR9 585 aa4.11□□□□□ -1.75
PTCD3-212ENST00000477520 PRAMEF26H0Y7S4 382 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms