RNA–Protein interactions for RNA: ENST00000477289.1

NSMCE4A-208, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, humanhuman

TSL 2

Gene NSMCE4A, Length 643 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE4A-208ENST00000477289 TUSC2O75896 110 aa3.79□□□□□ -1.8
NSMCE4A-208ENST00000477289 PNPP00491 289 aa3.79□□□□□ -1.8
NSMCE4A-208ENST00000477289 CD8AP01732 235 aa3.79□□□□□ -1.8
NSMCE4A-208ENST00000477289 MT-ND2P03891 347 aa3.79□□□□□ -1.8
NSMCE4A-208ENST00000477289 CD55P08174 381 aa3.79□□□□□ -1.8
NSMCE4A-208ENST00000477289 LIMS3P0CW19 117 aa3.79□□□□□ -1.8
NSMCE4A-208ENST00000477289 LIMS4P0CW20 117 aa3.79□□□□□ -1.8
NSMCE4A-208ENST00000477289 PPIAL4FP0DN26 164 aa3.79□□□□□ -1.8
NSMCE4A-208ENST00000477289 PAX1P15863 534 aa3.79□□□□□ -1.8
NSMCE4A-208ENST00000477289 PCMT1P22061 227 aa3.79□□□□□ -1.8
NSMCE4A-208ENST00000477289 CPT2P23786 658 aa3.79□□□□□ -1.8
NSMCE4A-208ENST00000477289 MYL9P24844 172 aa3.79□□□□□ -1.8
NSMCE4A-208ENST00000477289 PSMB9P28065 219 aa3.79□□□□□ -1.8
NSMCE4A-208ENST00000477289 C21orf33P30042 268 aaPredicted RBP3.79□□□□□ -1.8
NSMCE4A-208ENST00000477289 CD200P41217 278 aa3.79□□□□□ -1.8
NSMCE4A-208ENST00000477289 CRYBB2P43320 205 aa3.79□□□□□ -1.8
NSMCE4A-208ENST00000477289 MAGEB1P43366 347 aa3.79□□□□□ -1.8
NSMCE4A-208ENST00000477289 SOX2P48431 317 aa3.79□□□□□ -1.8
NSMCE4A-208ENST00000477289 RBP2P50120 134 aa3.79□□□□□ -1.8
NSMCE4A-208ENST00000477289 MMP15P51511 669 aa3.79□□□□□ -1.8
NSMCE4A-208ENST00000477289 PSMD7P51665 324 aa3.79□□□□□ -1.8
NSMCE4A-208ENST00000477289 GPM6AP51674 278 aa3.79□□□□□ -1.8
NSMCE4A-208ENST00000477289 BMXP51813 675 aa3.79□□□□□ -1.8
NSMCE4A-208ENST00000477289 SLC35A2P78381 396 aa3.79□□□□□ -1.8
NSMCE4A-208ENST00000477289 ACSM1Q08AH1 577 aa3.79□□□□□ -1.8
NSMCE4A-208ENST00000477289 MLLT11Q13015 90 aaPredicted RBP3.79□□□□□ -1.8
NSMCE4A-208ENST00000477289 CDK5R1Q15078 307 aa3.79□□□□□ -1.8
NSMCE4A-208ENST00000477289 OR8B8Q15620 311 aa3.79□□□□□ -1.8
NSMCE4A-208ENST00000477289 TBCEQ15813 527 aaPredicted RBP3.79□□□□□ -1.8
NSMCE4A-208ENST00000477289 MICBQ29980 383 aa3.79□□□□□ -1.8
NSMCE4A-208ENST00000477289 RSPO1Q2MKA7 263 aaPredicted RBP3.79□□□□□ -1.8
NSMCE4A-208ENST00000477289 TIMM50Q3ZCQ8 353 aa3.79□□□□□ -1.8
NSMCE4A-208ENST00000477289 Q499Y3 187 aa3.79□□□□□ -1.8
NSMCE4A-208ENST00000477289 C11orf71Q6IPW1 123 aa3.79□□□□□ -1.8
NSMCE4A-208ENST00000477289 ZNF773Q6PK81 442 aa3.79□□□□□ -1.8
NSMCE4A-208ENST00000477289 OVCH2Q7RTZ1 564 aa3.79□□□□□ -1.8
NSMCE4A-208ENST00000477289 SATL1Q86VE3 508 aa3.79□□□□□ -1.8
NSMCE4A-208ENST00000477289 MKXQ8IYA7 352 aa3.79□□□□□ -1.8
NSMCE4A-208ENST00000477289 Q8IYB0 196 aa3.79□□□□□ -1.8
NSMCE4A-208ENST00000477289 SPICQ8N5J4 248 aa3.79□□□□□ -1.8
NSMCE4A-208ENST00000477289 DNAAF1Q8NEP3 725 aa3.79□□□□□ -1.8
NSMCE4A-208ENST00000477289 TSPAN14Q8NG11 270 aa3.79□□□□□ -1.8
NSMCE4A-208ENST00000477289 OR10AD1Q8NGE0 317 aa3.79□□□□□ -1.8
NSMCE4A-208ENST00000477289 PHYHIPQ92561 330 aa3.79□□□□□ -1.8
NSMCE4A-208ENST00000477289 NRGNQ92686 78 aa3.79□□□□□ -1.8
NSMCE4A-208ENST00000477289 GHSRQ92847 366 aa3.79□□□□□ -1.8
NSMCE4A-208ENST00000477289 TMEM106AQ96A25 262 aa3.79□□□□□ -1.8
NSMCE4A-208ENST00000477289 SPSB1Q96BD6 273 aa3.79□□□□□ -1.8
NSMCE4A-208ENST00000477289 FGGYQ96C11 551 aa3.79□□□□□ -1.8
NSMCE4A-208ENST00000477289 RAB39BQ96DA2 213 aa3.79□□□□□ -1.8
NSMCE4A-208ENST00000477289 NR1H4Q96RI1 486 aaPredicted RBP3.79□□□□□ -1.8
NSMCE4A-208ENST00000477289 MGLLQ99685 303 aa3.79□□□□□ -1.8
NSMCE4A-208ENST00000477289 GAL3ST1Q99999 423 aa3.79□□□□□ -1.8
NSMCE4A-208ENST00000477289 PDCD1LG2Q9BQ51 273 aa3.79□□□□□ -1.8
NSMCE4A-208ENST00000477289 ELL3Q9HB65 397 aaPredicted RBP3.79□□□□□ -1.8
NSMCE4A-208ENST00000477289 EXOSC4Q9NPD3 245 aaKnown RBP3.79□□□□□ -1.8
NSMCE4A-208ENST00000477289 ACOT13Q9NPJ3 140 aa3.79□□□□□ -1.8
NSMCE4A-208ENST00000477289 G6PC2Q9NQR9 355 aa3.79□□□□□ -1.8
NSMCE4A-208ENST00000477289 GPR173Q9NS66 373 aa3.79□□□□□ -1.8
NSMCE4A-208ENST00000477289 ZNF275Q9NSD4 429 aaPredicted RBP3.79□□□□□ -1.8
NSMCE4A-208ENST00000477289 TMEM106BQ9NUM4 274 aa3.79□□□□□ -1.8
NSMCE4A-208ENST00000477289 UFSP2Q9NUQ7 469 aa3.79□□□□□ -1.8
NSMCE4A-208ENST00000477289 PAK1IP1Q9NWT1 392 aaPredicted RBP3.79□□□□□ -1.8
NSMCE4A-208ENST00000477289 C1orf123Q9NWV4 160 aa3.79□□□□□ -1.8
NSMCE4A-208ENST00000477289 MYEF2Q9P2K5 600 aaKnown RBP3.79□□□□□ -1.8
NSMCE4A-208ENST00000477289 SSR3Q9UNL2 185 aa3.79□□□□□ -1.8
NSMCE4A-208ENST00000477289 RHBDD3Q9Y3P4 386 aa3.79□□□□□ -1.8
NSMCE4A-208ENST00000477289 PPIAL4AQ9Y536 164 aa3.79□□□□□ -1.8
NSMCE4A-208ENST00000477289 V9GYS6 101 aa3.79□□□□□ -1.8
NSMCE4A-208ENST00000477289 FLNCQ14315 2725 aa3.79□□□□□ -1.8
NSMCE4A-208ENST00000477289 USP9YO00507 2555 aaPredicted RBP3.79□□□□□ -1.8
NSMCE4A-208ENST00000477289 SMG1Q96Q15 3661 aaKnown RBP3.78□□□□□ -1.8
NSMCE4A-208ENST00000477289 A0A1W2PPR1 153 aa3.78□□□□□ -1.8
NSMCE4A-208ENST00000477289 MAGEA13PA6NCF6 341 aa3.78□□□□□ -1.8
NSMCE4A-208ENST00000477289 NKX6-3A6NJ46 265 aa3.78□□□□□ -1.8
NSMCE4A-208ENST00000477289 OR4C45A6NMZ5 311 aa3.78□□□□□ -1.8
NSMCE4A-208ENST00000477289 ZNF732B4DXR9 585 aa3.78□□□□□ -1.8
NSMCE4A-208ENST00000477289 OGG1O15527 345 aa3.78□□□□□ -1.8
NSMCE4A-208ENST00000477289 PLPP2O43688 288 aa3.78□□□□□ -1.8
NSMCE4A-208ENST00000477289 SULT1B1O43704 296 aa3.78□□□□□ -1.8
NSMCE4A-208ENST00000477289 SRSF10O75494 262 aaKnown RBP3.78□□□□□ -1.8
NSMCE4A-208ENST00000477289 IGHV4-39P01824 125 aa3.78□□□□□ -1.8
NSMCE4A-208ENST00000477289 CSTBP04080 98 aaKnown RBP3.78□□□□□ -1.8
NSMCE4A-208ENST00000477289 TMEM225BP0DP42 221 aa3.78□□□□□ -1.8
NSMCE4A-208ENST00000477289 PSKH1P11801 424 aa3.78□□□□□ -1.8
NSMCE4A-208ENST00000477289 CD99P14209 185 aa3.78□□□□□ -1.8
NSMCE4A-208ENST00000477289 ATF1P18846 271 aa3.78□□□□□ -1.8
NSMCE4A-208ENST00000477289 CCL1P22362 96 aa3.78□□□□□ -1.8
NSMCE4A-208ENST00000477289 USF1P22415 310 aaPredicted RBP3.78□□□□□ -1.8
NSMCE4A-208ENST00000477289 GLRA1P23415 457 aa3.78□□□□□ -1.8
NSMCE4A-208ENST00000477289 AZGP1P25311 298 aaKnown RBP3.78□□□□□ -1.8
NSMCE4A-208ENST00000477289 TGFBR2P37173 567 aa3.78□□□□□ -1.8
NSMCE4A-208ENST00000477289 KIR3DL2P43630 455 aa3.78□□□□□ -1.8
NSMCE4A-208ENST00000477289 HAAOP46952 286 aa3.78□□□□□ -1.8
NSMCE4A-208ENST00000477289 GTF2A1P52655 376 aaPredicted RBP3.78□□□□□ -1.8
NSMCE4A-208ENST00000477289 CAPZA1P52907 286 aa3.78□□□□□ -1.8
NSMCE4A-208ENST00000477289 MTCP1P56278 107 aa3.78□□□□□ -1.8
NSMCE4A-208ENST00000477289 NANOS2P60321 138 aaKnown RBP3.78□□□□□ -1.8
NSMCE4A-208ENST00000477289 GPR176Q14439 515 aa3.78□□□□□ -1.8
NSMCE4A-208ENST00000477289 FAM189A2Q15884 450 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms