RNA–Protein interactions for RNA: ENST00000474871.5

NPHP3-206, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 4,493 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-206ENST00000474871 TMEM123Q8N131 208 aa4.23□□□□□ -1.73
NPHP3-206ENST00000474871 PNKDQ8N490 385 aa4.23□□□□□ -1.73
NPHP3-206ENST00000474871 SLC25A43Q8WUT9 341 aaPredicted RBP4.23□□□□□ -1.73
NPHP3-206ENST00000474871 BAALCQ8WXS3 180 aa4.23□□□□□ -1.73
NPHP3-206ENST00000474871 AURKBQ96GD4 344 aaPredicted RBP4.23□□□□□ -1.73
NPHP3-206ENST00000474871 GINS3Q9BRX5 216 aa4.23□□□□□ -1.73
NPHP3-206ENST00000474871 DEFB126Q9BYW3 111 aa4.23□□□□□ -1.73
NPHP3-206ENST00000474871 BOKQ9UMX3 212 aaPredicted RBP4.23□□□□□ -1.73
NPHP3-206ENST00000474871 CFAP20Q9Y6A4 193 aaKnown RBP4.23□□□□□ -1.73
NPHP3-206ENST00000474871 F2RL2O00254 374 aa4.23□□□□□ -1.73
NPHP3-206ENST00000474871 TMPRSS11DO60235 418 aa4.23□□□□□ -1.73
NPHP3-206ENST00000474871 PAGE4O60829 102 aa4.23□□□□□ -1.73
NPHP3-206ENST00000474871 NRASP01111 189 aa4.23□□□□□ -1.73
NPHP3-206ENST00000474871 HPXP02790 462 aa4.23□□□□□ -1.73
NPHP3-206ENST00000474871 TMEM225BP0DP42 221 aa4.23□□□□□ -1.73
NPHP3-206ENST00000474871 HOXB9P17482 250 aaPredicted RBP4.23□□□□□ -1.73
NPHP3-206ENST00000474871 EPHA2P29317 976 aa4.23□□□□□ -1.73
NPHP3-206ENST00000474871 SLC6A12P48065 614 aa4.23□□□□□ -1.73
NPHP3-206ENST00000474871 MEOX1P50221 254 aa4.23□□□□□ -1.73
NPHP3-206ENST00000474871 RPL38P63173 70 aaKnown RBP4.23□□□□□ -1.73
NPHP3-206ENST00000474871 PMPCAQ10713 525 aa4.23□□□□□ -1.73
NPHP3-206ENST00000474871 FOXL1Q12952 345 aa4.23□□□□□ -1.73
NPHP3-206ENST00000474871 DIAPH2-AS1Q14236 149 aa4.23□□□□□ -1.73
NPHP3-206ENST00000474871 MAPK14Q16539 360 aa4.23□□□□□ -1.73
NPHP3-206ENST00000474871 PEAR1Q5VY43 1037 aaPredicted RBP4.23□□□□□ -1.73
NPHP3-206ENST00000474871 GGNBP1Q5YKI7 109 aa4.23□□□□□ -1.73
NPHP3-206ENST00000474871 CD200R1LQ6Q8B3 271 aa4.23□□□□□ -1.73
NPHP3-206ENST00000474871 KLHDC8AQ8IYD2 350 aa4.23□□□□□ -1.73
NPHP3-206ENST00000474871 ZNF433Q8N7K0 673 aaPredicted RBP4.23□□□□□ -1.73
NPHP3-206ENST00000474871 NOXO1Q8NFA2 376 aa4.23□□□□□ -1.73
NPHP3-206ENST00000474871 OR2AJ1Q8NGZ0 328 aa4.23□□□□□ -1.73
NPHP3-206ENST00000474871 SNX22Q96L94 193 aa4.23□□□□□ -1.73
NPHP3-206ENST00000474871 GFM1Q96RP9 751 aaKnown RBP4.23□□□□□ -1.73
NPHP3-206ENST00000474871 SEPHS2Q99611 448 aa4.23□□□□□ -1.73
NPHP3-206ENST00000474871 CLN6Q9NWW5 311 aa4.23□□□□□ -1.73
NPHP3-206ENST00000474871 ZNF226Q9NYT6 803 aa4.23□□□□□ -1.73
NPHP3-206ENST00000474871 TAS2R16Q9NYV7 291 aa4.23□□□□□ -1.73
NPHP3-206ENST00000474871 FBXW11Q9UKB1 542 aa4.23□□□□□ -1.73
NPHP3-206ENST00000474871 DENND4CQ5VZ89 1909 aa4.23□□□□□ -1.73
NPHP3-206ENST00000474871 CKAP5Q14008 2032 aa4.23□□□□□ -1.73
NPHP3-206ENST00000474871 LOC105369274A0A096LPK9 316 aa4.23□□□□□ -1.73
NPHP3-206ENST00000474871 OR7C2O60412 319 aa4.23□□□□□ -1.73
NPHP3-206ENST00000474871 IRF9Q00978 393 aa4.23□□□□□ -1.73
NPHP3-206ENST00000474871 AWAT1Q58HT5 328 aa4.23□□□□□ -1.73
NPHP3-206ENST00000474871 AKR1C8PQ5T2L2 129 aa4.23□□□□□ -1.73
NPHP3-206ENST00000474871 ANKRD34AQ69YU3 496 aa4.23□□□□□ -1.73
NPHP3-206ENST00000474871 C22orf39Q6P5X5 142 aa4.23□□□□□ -1.73
NPHP3-206ENST00000474871 ZNF429Q86V71 674 aa4.23□□□□□ -1.73
NPHP3-206ENST00000474871 OR4N4Q8N0Y3 316 aa4.23□□□□□ -1.73
NPHP3-206ENST00000474871 CA13Q8N1Q1 262 aa4.23□□□□□ -1.73
NPHP3-206ENST00000474871 BLNKQ8WV28 456 aa4.23□□□□□ -1.73
NPHP3-206ENST00000474871 RCN3Q96D15 328 aa4.23□□□□□ -1.73
NPHP3-206ENST00000474871 GINS4Q9BRT9 223 aa4.23□□□□□ -1.73
NPHP3-206ENST00000474871 ZBP1Q9H171 429 aa4.23□□□□□ -1.73
NPHP3-206ENST00000474871 SRD5A3Q9H8P0 318 aa4.23□□□□□ -1.73
NPHP3-206ENST00000474871 NPVFQ9HCQ7 196 aa4.23□□□□□ -1.73
NPHP3-206ENST00000474871 YARS2Q9Y2Z4 477 aaKnown RBP4.23□□□□□ -1.73
NPHP3-206ENST00000474871 COL4A6Q14031 1691 aa4.23□□□□□ -1.73
NPHP3-206ENST00000474871 TMEM131Q92545 1883 aa4.23□□□□□ -1.73
NPHP3-206ENST00000474871 RIIAD1A6NNX1 92 aa4.23□□□□□ -1.73
NPHP3-206ENST00000474871 BBIP1A8MTZ0 92 aa4.23□□□□□ -1.73
NPHP3-206ENST00000474871 SEMA4FO95754 770 aa4.23□□□□□ -1.73
NPHP3-206ENST00000474871 RAB36O95755 333 aa4.23□□□□□ -1.73
NPHP3-206ENST00000474871 PIRTP0C851 137 aa4.23□□□□□ -1.73
NPHP3-206ENST00000474871 GFRA1P56159 465 aa4.23□□□□□ -1.73
NPHP3-206ENST00000474871 MRPS21P82921 87 aaKnown RBP4.23□□□□□ -1.73
NPHP3-206ENST00000474871 ELOBQ15370 118 aa4.23□□□□□ -1.73
NPHP3-206ENST00000474871 ARL9Q6T311 187 aa4.23□□□□□ -1.73
NPHP3-206ENST00000474871 DPY19L4Q7Z388 723 aa4.23□□□□□ -1.73
NPHP3-206ENST00000474871 TMEM173Q86WV6 379 aaPredicted RBP4.23□□□□□ -1.73
NPHP3-206ENST00000474871 SPEM1Q8N4L4 309 aa4.23□□□□□ -1.73
NPHP3-206ENST00000474871 JMJD8Q96S16 334 aa4.23□□□□□ -1.73
NPHP3-206ENST00000474871 GPER1Q99527 375 aa4.23□□□□□ -1.73
NPHP3-206ENST00000474871 TM2D2Q9BX73 214 aa4.23□□□□□ -1.73
NPHP3-206ENST00000474871 OR51E2Q9H255 320 aa4.23□□□□□ -1.73
NPHP3-206ENST00000474871 MEPEQ9NQ76 525 aaPredicted RBP4.23□□□□□ -1.73
NPHP3-206ENST00000474871 KLRF1Q9NZS2 232 aa4.23□□□□□ -1.73
NPHP3-206ENST00000474871 DIDO1Q9BTC0 2240 aaKnown RBP4.22□□□□□ -1.73
NPHP3-206ENST00000474871 C13orf42A0A1B0GVH6 325 aa4.22□□□□□ -1.73
NPHP3-206ENST00000474871 ODAMA1E959 279 aa4.22□□□□□ -1.73
NPHP3-206ENST00000474871 TNFSF11O14788 317 aa4.22□□□□□ -1.73
NPHP3-206ENST00000474871 YY2O15391 372 aa4.22□□□□□ -1.73
NPHP3-206ENST00000474871 LYRM1O43325 122 aa4.22□□□□□ -1.73
NPHP3-206ENST00000474871 ORC5O43913 435 aa4.22□□□□□ -1.73
NPHP3-206ENST00000474871 TBX6O95947 436 aaPredicted RBP4.22□□□□□ -1.73
NPHP3-206ENST00000474871 FCGR3AP08637 254 aa4.22□□□□□ -1.73
NPHP3-206ENST00000474871 MMP9P14780 707 aa4.22□□□□□ -1.73
NPHP3-206ENST00000474871 CDK5R2Q13319 367 aa4.22□□□□□ -1.73
NPHP3-206ENST00000474871 AADACL3Q5VUY0 350 aa4.22□□□□□ -1.73
NPHP3-206ENST00000474871 C22orf42Q6IC83 251 aa4.22□□□□□ -1.73
NPHP3-206ENST00000474871 PRR27Q6MZM9 219 aa4.22□□□□□ -1.73
NPHP3-206ENST00000474871 RHBDD2Q6NTF9 364 aa4.22□□□□□ -1.73
NPHP3-206ENST00000474871 H2BFWTQ7Z2G1 175 aa4.22□□□□□ -1.73
NPHP3-206ENST00000474871 POC1AQ8NBT0 407 aa4.22□□□□□ -1.73
NPHP3-206ENST00000474871 OR5W2Q8NH69 310 aa4.22□□□□□ -1.73
NPHP3-206ENST00000474871 CANT1Q8WVQ1 401 aa4.22□□□□□ -1.73
NPHP3-206ENST00000474871 ZNF576Q9H609 170 aa4.22□□□□□ -1.73
NPHP3-206ENST00000474871 CENPVL1A0A0U1RR11 272 aa4.22□□□□□ -1.73
NPHP3-206ENST00000474871 CENPVL3A0A0U1RRI6 287 aa4.22□□□□□ -1.73
NPHP3-206ENST00000474871 IGLC7A0M8Q6 106 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms