RNA–Protein interactions for RNA: ENST00000474421.1

PDLIM4-206, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 1,084 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-206ENST00000474421 C17orf98A8MV24 154 aa16.54■□□□□ 0.24
PDLIM4-206ENST00000474421 KIR2DS4P43632 304 aa16.54■□□□□ 0.24
PDLIM4-206ENST00000474421 ISL1P61371 349 aa16.54■□□□□ 0.24
PDLIM4-206ENST00000474421 ACTC1P68032 377 aa16.54■□□□□ 0.24
PDLIM4-206ENST00000474421 ACTA1P68133 377 aa16.54■□□□□ 0.24
PDLIM4-206ENST00000474421 TMEM244Q5VVB8 128 aa16.54■□□□□ 0.24
PDLIM4-206ENST00000474421 SLC25A26Q70HW3 274 aa16.54■□□□□ 0.24
PDLIM4-206ENST00000474421 ENTHD1Q8IYW4 607 aa16.54■□□□□ 0.24
PDLIM4-206ENST00000474421 PRSS35Q8N3Z0 413 aa16.54■□□□□ 0.24
PDLIM4-206ENST00000474421 DNAAF1Q8NEP3 725 aa16.54■□□□□ 0.24
PDLIM4-206ENST00000474421 OR13D1Q8NGV5 346 aa16.54■□□□□ 0.24
PDLIM4-206ENST00000474421 FOXRED1Q96CU9 486 aaPredicted RBP16.54■□□□□ 0.24
PDLIM4-206ENST00000474421 SEBOXQ9HB31 216 aaPredicted RBP16.54■□□□□ 0.24
PDLIM4-206ENST00000474421 NOTCH1P46531 2555 aa16.54■□□□□ 0.24
PDLIM4-206ENST00000474421 TET2Q6N021 2002 aaPredicted RBP16.53■□□□□ 0.24
PDLIM4-206ENST00000474421 H3BSH0 61 aa16.53■□□□□ 0.24
PDLIM4-206ENST00000474421 ZNF737O75373 536 aa16.53■□□□□ 0.24
PDLIM4-206ENST00000474421 CYB5AP00167 134 aa16.53■□□□□ 0.24
PDLIM4-206ENST00000474421 ZNF728P0DKX0 622 aa16.53■□□□□ 0.24
PDLIM4-206ENST00000474421 PIPP12273 146 aaPredicted RBP16.53■□□□□ 0.24
PDLIM4-206ENST00000474421 RBP2P50120 134 aa16.53■□□□□ 0.24
PDLIM4-206ENST00000474421 BMXP51813 675 aa16.53■□□□□ 0.24
PDLIM4-206ENST00000474421 EDDM3BP56851 147 aa16.53■□□□□ 0.24
PDLIM4-206ENST00000474421 MEF2CQ06413 473 aaPredicted RBP16.53■□□□□ 0.24
PDLIM4-206ENST00000474421 LY6EQ16553 131 aa16.53■□□□□ 0.24
PDLIM4-206ENST00000474421 EGFL6Q8IUX8 553 aa16.53■□□□□ 0.24
PDLIM4-206ENST00000474421 OR8H2Q8N162 312 aa16.53■□□□□ 0.24
PDLIM4-206ENST00000474421 OR2T6Q8NHC8 308 aa16.53■□□□□ 0.24
PDLIM4-206ENST00000474421 SLAMF9Q96A28 289 aa16.53■□□□□ 0.24
PDLIM4-206ENST00000474421 SNX22Q96L94 193 aa16.53■□□□□ 0.24
PDLIM4-206ENST00000474421 NPFFR1Q9GZQ6 430 aa16.53■□□□□ 0.24
PDLIM4-206ENST00000474421 TBL2Q9Y4P3 447 aaKnown RBP16.53■□□□□ 0.24
PDLIM4-206ENST00000474421 IGKV1-27A0A075B6S5 117 aa16.52■□□□□ 0.24
PDLIM4-206ENST00000474421 SNTNA6NMZ2 147 aa16.52■□□□□ 0.24
PDLIM4-206ENST00000474421 VGLL3A8MV65 326 aa16.52■□□□□ 0.24
PDLIM4-206ENST00000474421 ATP1B3P54709 279 aa16.52■□□□□ 0.24
PDLIM4-206ENST00000474421 DLX6P56179 175 aa16.52■□□□□ 0.24
PDLIM4-206ENST00000474421 ZNF85Q03923 595 aa16.52■□□□□ 0.24
PDLIM4-206ENST00000474421 TP53I3Q53FA7 332 aa16.52■□□□□ 0.24
PDLIM4-206ENST00000474421 SLC25A30Q5SVS4 291 aa16.52■□□□□ 0.24
PDLIM4-206ENST00000474421 MEDAGQ5VYS4 303 aa16.52■□□□□ 0.24
PDLIM4-206ENST00000474421 ZNF782Q6ZMW2 699 aaPredicted RBP16.52■□□□□ 0.24
PDLIM4-206ENST00000474421 Q6ZTK2 550 aa16.52■□□□□ 0.24
PDLIM4-206ENST00000474421 EMG1Q92979 244 aaKnown RBP16.52■□□□□ 0.24
PDLIM4-206ENST00000474421 hADV38S2A0JD32 116 aa16.51■□□□□ 0.23
PDLIM4-206ENST00000474421 FAM90A8PA6NJQ4 464 aa16.51■□□□□ 0.23
PDLIM4-206ENST00000474421 F8VVB4 439 aa16.51■□□□□ 0.23
PDLIM4-206ENST00000474421 F8VWA3 439 aa16.51■□□□□ 0.23
PDLIM4-206ENST00000474421 ISG15P05161 165 aa16.51■□□□□ 0.23
PDLIM4-206ENST00000474421 ALPLP05186 524 aa16.51■□□□□ 0.23
PDLIM4-206ENST00000474421 PRKACBP22694 351 aa16.51■□□□□ 0.23
PDLIM4-206ENST00000474421 KIR3DL2P43630 455 aa16.51■□□□□ 0.23
PDLIM4-206ENST00000474421 HERPUD1Q15011 391 aa16.51■□□□□ 0.23
PDLIM4-206ENST00000474421 CRIP3Q6Q6R5 217 aa16.51■□□□□ 0.23
PDLIM4-206ENST00000474421 UTS2BQ765I0 119 aa16.51■□□□□ 0.23
PDLIM4-206ENST00000474421 OR2G2Q8NGZ5 317 aa16.51■□□□□ 0.23
PDLIM4-206ENST00000474421 PPP1R35Q8TAP8 253 aa16.51■□□□□ 0.23
PDLIM4-206ENST00000474421 MALSU1Q96EH3 234 aa16.51■□□□□ 0.23
PDLIM4-206ENST00000474421 MRPL48Q96GC5 212 aaKnown RBP16.51■□□□□ 0.23
PDLIM4-206ENST00000474421 HRASLS5Q96KN8 279 aa16.51■□□□□ 0.23
PDLIM4-206ENST00000474421 MYCBPQ99417 103 aaPredicted RBP16.51■□□□□ 0.23
PDLIM4-206ENST00000474421 CDCA4Q9BXL8 241 aa16.51■□□□□ 0.23
PDLIM4-206ENST00000474421 GLS2Q9UI32 602 aa16.51■□□□□ 0.23
PDLIM4-206ENST00000474421 DAPL1A0PJW8 107 aa16.5■□□□□ 0.23
PDLIM4-206ENST00000474421 HAND1O96004 215 aa16.5■□□□□ 0.23
PDLIM4-206ENST00000474421 ARG1P05089 322 aa16.5■□□□□ 0.23
PDLIM4-206ENST00000474421 CSF1P09603 554 aa16.5■□□□□ 0.23
PDLIM4-206ENST00000474421 ZNF20P17024 532 aa16.5■□□□□ 0.23
PDLIM4-206ENST00000474421 PEX2P28328 305 aa16.5■□□□□ 0.23
PDLIM4-206ENST00000474421 EFNB2P52799 333 aa16.5■□□□□ 0.23
PDLIM4-206ENST00000474421 MTCP1P56278 107 aa16.5■□□□□ 0.23
PDLIM4-206ENST00000474421 SNRPGP62308 76 aaKnown RBP16.5■□□□□ 0.23
PDLIM4-206ENST00000474421 FDX2Q6P4F2 183 aa16.5■□□□□ 0.23
PDLIM4-206ENST00000474421 LHFPL2Q6ZUX7 228 aa16.5■□□□□ 0.23
PDLIM4-206ENST00000474421 RDH10Q8IZV5 341 aa16.5■□□□□ 0.23
PDLIM4-206ENST00000474421 OR11H6Q8NGC7 330 aa16.5■□□□□ 0.23
PDLIM4-206ENST00000474421 PYDC1Q8WXC3 89 aa16.5■□□□□ 0.23
PDLIM4-206ENST00000474421 SPSB1Q96BD6 273 aa16.5■□□□□ 0.23
PDLIM4-206ENST00000474421 RNFT2Q96EX2 444 aa16.5■□□□□ 0.23
PDLIM4-206ENST00000474421 ZNF714Q96N38 554 aa16.5■□□□□ 0.23
PDLIM4-206ENST00000474421 ABCB10Q9NRK6 738 aa16.5■□□□□ 0.23
PDLIM4-206ENST00000474421 TRBV2A0A0J9YWF9 115 aa16.49■□□□□ 0.23
PDLIM4-206ENST00000474421 ODF3BA8MYP8 253 aa16.49■□□□□ 0.23
PDLIM4-206ENST00000474421 SLC16A6O15403 523 aa16.49■□□□□ 0.23
PDLIM4-206ENST00000474421 ENTPD6O75354 484 aa16.49■□□□□ 0.23
PDLIM4-206ENST00000474421 INMTO95050 263 aa16.49■□□□□ 0.23
PDLIM4-206ENST00000474421 TSPAN15O95858 294 aa16.49■□□□□ 0.23
PDLIM4-206ENST00000474421 OCM2P0CE71 109 aa16.49■□□□□ 0.23
PDLIM4-206ENST00000474421 OCMP0CE72 109 aaPredicted RBP16.49■□□□□ 0.23
PDLIM4-206ENST00000474421 IGHV1-8P0DP01 117 aa16.49■□□□□ 0.23
PDLIM4-206ENST00000474421 ATF1P18846 271 aa16.49■□□□□ 0.23
PDLIM4-206ENST00000474421 CCR9P51686 369 aa16.49■□□□□ 0.23
PDLIM4-206ENST00000474421 EDDM3AQ14507 147 aa16.49■□□□□ 0.23
PDLIM4-206ENST00000474421 SPIN3Q5JUX0 258 aa16.49■□□□□ 0.23
PDLIM4-206ENST00000474421 ZNF626Q68DY1 528 aa16.49■□□□□ 0.23
PDLIM4-206ENST00000474421 ZFP1Q6P2D0 407 aa16.49■□□□□ 0.23
PDLIM4-206ENST00000474421 FAM58AQ8N1B3 248 aa16.49■□□□□ 0.23
PDLIM4-206ENST00000474421 PIFOQ8TCI5 191 aa16.49■□□□□ 0.23
PDLIM4-206ENST00000474421 RPS4Y2Q8TD47 263 aa16.49■□□□□ 0.23
PDLIM4-206ENST00000474421 ADAT3Q96EY9 351 aaPredicted RBP16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms