RNA–Protein interactions for RNA: ENST00000474384.2

SNRPB-203, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

TSL 5

Gene SNRPB, Length 985 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-203ENST00000474384 RFPL4AL1F8VTS6 287 aa15.1■□□□□ 0.01
SNRPB-203ENST00000474384 PHF1O43189 567 aaPredicted RBP15.1■□□□□ 0.01
SNRPB-203ENST00000474384 CD5LO43866 347 aa15.1■□□□□ 0.01
SNRPB-203ENST00000474384 KDM4BO94953 1096 aa15.1■□□□□ 0.01
SNRPB-203ENST00000474384 TGFAP01135 160 aa15.1■□□□□ 0.01
SNRPB-203ENST00000474384 SFTPBP07988 381 aa15.1■□□□□ 0.01
SNRPB-203ENST00000474384 JUNBP17275 347 aaPredicted RBP15.1■□□□□ 0.01
SNRPB-203ENST00000474384 ZFP36P26651 326 aaKnown RBP15.1■□□□□ 0.01
SNRPB-203ENST00000474384 CALRP27797 417 aaKnown RBP15.1■□□□□ 0.01
SNRPB-203ENST00000474384 PITPNBP48739 271 aa15.1■□□□□ 0.01
SNRPB-203ENST00000474384 LCN2P80188 198 aa15.1■□□□□ 0.01
SNRPB-203ENST00000474384 ESCO2Q56NI9 601 aa15.1■□□□□ 0.01
SNRPB-203ENST00000474384 ATPAF1Q5TC12 328 aaPredicted RBP15.1■□□□□ 0.01
SNRPB-203ENST00000474384 ZNF841Q6ZN19 808 aa15.1■□□□□ 0.01
SNRPB-203ENST00000474384 Q8IYB0 196 aa15.1■□□□□ 0.01
SNRPB-203ENST00000474384 FAM58AQ8N1B3 248 aa15.1■□□□□ 0.01
SNRPB-203ENST00000474384 FAM216BQ8N7L0 139 aa15.1■□□□□ 0.01
SNRPB-203ENST00000474384 PNLDC1Q8NA58 520 aaKnown RBP15.1■□□□□ 0.01
SNRPB-203ENST00000474384 SLITRK2Q9H156 845 aa15.1■□□□□ 0.01
SNRPB-203ENST00000474384 ELL3Q9HB65 397 aaPredicted RBP15.1■□□□□ 0.01
SNRPB-203ENST00000474384 KAAG1Q9UBP8 84 aa15.1■□□□□ 0.01
SNRPB-203ENST00000474384 OR14J1Q9UGF5 321 aa15.1■□□□□ 0.01
SNRPB-203ENST00000474384 ZNF222Q9UK12 451 aa15.1■□□□□ 0.01
SNRPB-203ENST00000474384 ING4Q9UNL4 249 aa15.1■□□□□ 0.01
SNRPB-203ENST00000474384 TEP1Q99973 2627 aaKnown RBP15.09■□□□□ 0.01
SNRPB-203ENST00000474384 CDRT1O95170 752 aa15.09■□□□□ 0.01
SNRPB-203ENST00000474384 MSMBP08118 114 aa15.09■□□□□ 0.01
SNRPB-203ENST00000474384 CD36P16671 472 aa15.09■□□□□ 0.01
SNRPB-203ENST00000474384 PRKACAP17612 351 aa15.09■□□□□ 0.01
SNRPB-203ENST00000474384 CPT2P23786 658 aa15.09■□□□□ 0.01
SNRPB-203ENST00000474384 PRDX2P32119 198 aa15.09■□□□□ 0.01
SNRPB-203ENST00000474384 CEBPDP49716 269 aaPredicted RBP15.09■□□□□ 0.01
SNRPB-203ENST00000474384 SNU13P55769 128 aaKnown RBP15.09■□□□□ 0.01
SNRPB-203ENST00000474384 GNB2P62879 340 aa15.09■□□□□ 0.01
SNRPB-203ENST00000474384 ASCL4Q6XD76 172 aa15.09■□□□□ 0.01
SNRPB-203ENST00000474384 ZNF788Q6ZQV5 615 aa15.09■□□□□ 0.01
SNRPB-203ENST00000474384 Q71RC1 249 aaPredicted RBP15.09■□□□□ 0.01
SNRPB-203ENST00000474384 SLC36A1Q7Z2H8 476 aa15.09■□□□□ 0.01
SNRPB-203ENST00000474384 LYPD6Q86Y78 171 aa15.09■□□□□ 0.01
SNRPB-203ENST00000474384 CDH26Q8IXH8 852 aa15.09■□□□□ 0.01
SNRPB-203ENST00000474384 CD177Q8N6Q3 437 aa15.09■□□□□ 0.01
SNRPB-203ENST00000474384 NKAIN3Q8N8D7 197 aa15.09■□□□□ 0.01
SNRPB-203ENST00000474384 PXT1Q8NFP0 134 aa15.09■□□□□ 0.01
SNRPB-203ENST00000474384 OR10K1Q8NGX5 313 aa15.09■□□□□ 0.01
SNRPB-203ENST00000474384 GAFA1Q96PS6 74 aa15.09■□□□□ 0.01
SNRPB-203ENST00000474384 SSBP3Q9BWW4 388 aaPredicted RBP15.09■□□□□ 0.01
SNRPB-203ENST00000474384 DNTTIP1Q9H147 329 aa15.09■□□□□ 0.01
SNRPB-203ENST00000474384 OR51E2Q9H255 320 aa15.09■□□□□ 0.01
SNRPB-203ENST00000474384 CNTD2Q9H8S5 307 aa15.09■□□□□ 0.01
SNRPB-203ENST00000474384 HMG20AQ9NP66 347 aa15.09■□□□□ 0.01
SNRPB-203ENST00000474384 EXOSC4Q9NPD3 245 aaKnown RBP15.09■□□□□ 0.01
SNRPB-203ENST00000474384 IL36RNQ9UBH0 155 aa15.09■□□□□ 0.01
SNRPB-203ENST00000474384 CLN8Q9UBY8 286 aa15.09■□□□□ 0.01
SNRPB-203ENST00000474384 STUB1Q9UNE7 303 aa15.09■□□□□ 0.01
SNRPB-203ENST00000474384 TLN2Q9Y4G6 2542 aa15.09■□□□□ 0.01
SNRPB-203ENST00000474384 NKX6-3A6NJ46 265 aa15.08■□□□□ 0
SNRPB-203ENST00000474384 DVL1O14640 695 aa15.08■□□□□ 0
SNRPB-203ENST00000474384 FOXH1O75593 365 aa15.08■□□□□ 0
SNRPB-203ENST00000474384 FCN3O75636 299 aa15.08■□□□□ 0
SNRPB-203ENST00000474384 KNG1P01042 644 aa15.08■□□□□ 0
SNRPB-203ENST00000474384 SELLP14151 372 aa15.08■□□□□ 0
SNRPB-203ENST00000474384 GALP22466 123 aa15.08■□□□□ 0
SNRPB-203ENST00000474384 IKZF1Q13422 519 aa15.08■□□□□ 0
SNRPB-203ENST00000474384 RSU1Q15404 277 aa15.08■□□□□ 0
SNRPB-203ENST00000474384 WDR25Q64LD2 544 aaPredicted RBP15.08■□□□□ 0
SNRPB-203ENST00000474384 C22orf42Q6IC83 251 aa15.08■□□□□ 0
SNRPB-203ENST00000474384 FGFRL1Q8N441 504 aa15.08■□□□□ 0
SNRPB-203ENST00000474384 MED30Q96HR3 178 aa15.08■□□□□ 0
SNRPB-203ENST00000474384 S100A13Q99584 98 aa15.08■□□□□ 0
SNRPB-203ENST00000474384 YAE1D1Q9NRH1 226 aa15.08■□□□□ 0
SNRPB-203ENST00000474384 TXNL4BQ9NX01 149 aaKnown RBP15.08■□□□□ 0
SNRPB-203ENST00000474384 AK6Q9Y3D8 172 aaKnown RBP15.08■□□□□ 0
SNRPB-203ENST00000474384 MAB21L2Q9Y586 359 aa15.08■□□□□ 0
SNRPB-203ENST00000474384 ARHGAP32A7KAX9 2087 aa15.07■□□□□ 0
SNRPB-203ENST00000474384 KIAA1324LA8MWY0 1029 aaPredicted RBP15.07■□□□□ 0
SNRPB-203ENST00000474384 HTR3BO95264 441 aa15.07■□□□□ 0
SNRPB-203ENST00000474384 GADD45AP24522 165 aa15.07■□□□□ 0
SNRPB-203ENST00000474384 DUSP1P28562 367 aa15.07■□□□□ 0
SNRPB-203ENST00000474384 IL13RA1P78552 427 aa15.07■□□□□ 0
SNRPB-203ENST00000474384 DGUOKQ16854 277 aa15.07■□□□□ 0
SNRPB-203ENST00000474384 GLT8D1Q68CQ7 371 aa15.07■□□□□ 0
SNRPB-203ENST00000474384 FAM166AQ6J272 317 aa15.07■□□□□ 0
SNRPB-203ENST00000474384 FIP1L1Q6UN15 594 aaKnown RBP15.07■□□□□ 0
SNRPB-203ENST00000474384 ZNRF1Q8ND25 227 aa15.07■□□□□ 0
SNRPB-203ENST00000474384 OR4D6Q8NGJ1 314 aa15.07■□□□□ 0
SNRPB-203ENST00000474384 TMEM186Q96B77 213 aa15.07■□□□□ 0
SNRPB-203ENST00000474384 SDSLQ96GA7 329 aa15.07■□□□□ 0
SNRPB-203ENST00000474384 GFI1Q99684 422 aa15.07■□□□□ 0
SNRPB-203ENST00000474384 METTL9Q9H1A3 318 aa15.07■□□□□ 0
SNRPB-203ENST00000474384 RHOFQ9HBH0 211 aa15.07■□□□□ 0
SNRPB-203ENST00000474384 METRNQ9UJH8 293 aa15.07■□□□□ 0
SNRPB-203ENST00000474384 SSR3Q9UNL2 185 aa15.07■□□□□ 0
SNRPB-203ENST00000474384 MRPS28Q9Y2Q9 187 aaKnown RBP15.07■□□□□ 0
SNRPB-203ENST00000474384 MALRD1Q5VYJ5 2156 aa15.07■□□□□ 0
SNRPB-203ENST00000474384 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.06■□□□□ 03e-7■■■■□ 19.9
SNRPB-203ENST00000474384 ANK3Q12955 4377 aaKnown RBP15.06■□□□□ 0
SNRPB-203ENST00000474384 SHISA3A0PJX4 238 aa15.06■□□□□ 0
SNRPB-203ENST00000474384 A8MXK9 166 aa15.06■□□□□ 0
SNRPB-203ENST00000474384 SIGLEC5O15389 551 aa15.06■□□□□ 0
SNRPB-203ENST00000474384 NDUFB3O43676 98 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms