RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 TMED7-TICAM2A0A0A6YYA0 188 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 IGLV1-36A0A0B4J1U3 117 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 A0A0B4J203 849 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 TRAV34A0A0B4J273 112 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 IGHV3-16A0A0C4DH30 117 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 C2orf92A0A1B0GVN3 265 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 A0A1W2PNV4 684 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 A0A1W2PQD3 144 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 A0A1W2PQL4 384 aaPredicted RBP1.12□□□□□ -2.23
CCDC39-203ENST00000473854 A0A1W2PRG6 482 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 PINLYPA6NC86 204 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 TVP23AA6NH52 213 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 OR6C70A6NIJ9 312 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 RIIAD1A6NNX1 92 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 EFCAB7A8K855 629 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 CLDN25C9JDP6 229 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 C11orf98E9PRG8 122 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 F8VVB4 439 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 F8VWA3 439 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 G3V3Y1 287 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 H0YC42 278 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 H3BSH0 61 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 POLR1CO15160 346 aaPredicted RBP1.12□□□□□ -2.23
CCDC39-203ENST00000473854 PIN1P1O15428 100 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 YKT6O15498 198 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 ZNF264O43296 627 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 RNF13O43567 381 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 TRAF3IP2O43734 574 aaPredicted RBP1.12□□□□□ -2.23
CCDC39-203ENST00000473854 LANCL1O43813 399 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 EFNA2O43921 213 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 MPZL2O60487 215 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 CDC40O60508 579 aaKnown RBP eCLIP1.12□□□□□ -2.23
CCDC39-203ENST00000473854 HCN1O60741 890 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 CYTIPO60759 359 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 HPGDSO60760 199 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 RAMP1O60894 148 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 FCGR3BO75015 233 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 SAP30O75446 220 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 MTRF1O75570 445 aaKnown RBP1.12□□□□□ -2.23
CCDC39-203ENST00000473854 REM1O75628 298 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 UPK3AO75631 287 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 KLF7O75840 302 aaPredicted RBP1.12□□□□□ -2.23
CCDC39-203ENST00000473854 UPK1BO75841 260 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 SC5DO75845 299 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 GLCEO94923 617 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 AKR7A3O95154 331 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 CDRT1O95170 752 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 NDUFB2O95178 105 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 SNX4O95219 450 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 VENTXO95231 258 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 TXNDC12O95881 172 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 PAHP00439 452 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 CSTAP01040 98 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 IGF2P01344 180 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 IGHMP01871 453 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 IFNA16P05015 189 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 HEXBP07686 556 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 CD14P08571 375 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 SP9P0CG40 484 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 OR8G3PP0DMU2 310 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 CCL3P10147 92 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 SPP1P10451 314 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 PNMTP11086 282 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 CTLA4P16410 223 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 SPI1P17947 270 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 ADRA2CP18825 462 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 ATF1P18846 271 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 GSTM3P21266 225 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 CSRP1P21291 193 aaKnown RBP1.12□□□□□ -2.23
CCDC39-203ENST00000473854 F8A1P23610 371 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 ACP1P24666 158 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 EDNRAP25101 427 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 CALRP27797 417 aaKnown RBP1.12□□□□□ -2.23
CCDC39-203ENST00000473854 IL12BP29460 328 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 GRPRP30550 384 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 GPR183P32249 361 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 SDC2P34741 201 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 BTCP35070 178 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 SFTPDP35247 375 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 ACVR1BP36896 505 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 IFNGR2P38484 337 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 AQP2P41181 271 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 RPS27P42677 84 aaKnown RBP1.12□□□□□ -2.23
CCDC39-203ENST00000473854 MAGEB1P43366 347 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 KIR3DL2P43630 455 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 PPICP45877 212 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 RPS5P46782 204 aaKnown RBP1.12□□□□□ -2.23
CCDC39-203ENST00000473854 CDX1P47902 265 aaPredicted RBP1.12□□□□□ -2.23
CCDC39-203ENST00000473854 ARRB1P49407 418 aaPredicted RBP1.12□□□□□ -2.23
CCDC39-203ENST00000473854 GDI2P50395 445 aaKnown RBP1.12□□□□□ -2.23
CCDC39-203ENST00000473854 P2RY4P51582 365 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 SLC25A1P53007 311 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 HCCSP53701 268 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 PSMD4P55036 377 aaKnown RBP1.12□□□□□ -2.23
CCDC39-203ENST00000473854 SH3BGRP55822 239 aaPredicted RBP1.12□□□□□ -2.23
CCDC39-203ENST00000473854 OR12D2P58182 307 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 SMIM11AP58511 58 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 SLC26A5P58743 744 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 RPS15P62841 145 aaKnown RBP1.12□□□□□ -2.23
CCDC39-203ENST00000473854 SKP1P63208 163 aa1.12□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms