RNA–Protein interactions for RNA: ENST00000473373.1

CPNE1-222, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-222ENST00000473373 SSMEM1Q8WWF3 244 aa9.49□□□□□ -0.89
CPNE1-222ENST00000473373 ADAT3Q96EY9 351 aaPredicted RBP9.49□□□□□ -0.89
CPNE1-222ENST00000473373 OPALINQ96PE5 141 aa9.49□□□□□ -0.89
CPNE1-222ENST00000473373 GPER1Q99527 375 aa9.49□□□□□ -0.89
CPNE1-222ENST00000473373 DPAGT1Q9H3H5 408 aa9.49□□□□□ -0.89
CPNE1-222ENST00000473373 METTL8Q9H825 291 aaKnown RBP9.49□□□□□ -0.89
CPNE1-222ENST00000473373 ERVK13-1Q9NX77 482 aa9.49□□□□□ -0.89
CPNE1-222ENST00000473373 MAB21L2Q9Y586 359 aa9.49□□□□□ -0.89
CPNE1-222ENST00000473373 A0A0U1RQK1 487 aa9.48□□□□□ -0.89
CPNE1-222ENST00000473373 TMEM212A6NML5 194 aa9.48□□□□□ -0.89
CPNE1-222ENST00000473373 ANKRD65E5RJM6 399 aa9.48□□□□□ -0.89
CPNE1-222ENST00000473373 NPFFO15130 113 aa9.48□□□□□ -0.89
CPNE1-222ENST00000473373 FCN3O75636 299 aa9.48□□□□□ -0.89
CPNE1-222ENST00000473373 CLIC3O95833 236 aa9.48□□□□□ -0.89
CPNE1-222ENST00000473373 ISG15P05161 165 aa9.48□□□□□ -0.89
CPNE1-222ENST00000473373 CD2P06729 351 aa9.48□□□□□ -0.89
CPNE1-222ENST00000473373 CHRM2P08172 466 aa9.48□□□□□ -0.89
CPNE1-222ENST00000473373 HKR1P10072 659 aa9.48□□□□□ -0.89
CPNE1-222ENST00000473373 OMGP23515 440 aa9.48□□□□□ -0.89
CPNE1-222ENST00000473373 GABRR1P24046 479 aa9.48□□□□□ -0.89
CPNE1-222ENST00000473373 PEX2P28328 305 aa9.48□□□□□ -0.89
CPNE1-222ENST00000473373 CCR9P51686 369 aa9.48□□□□□ -0.89
CPNE1-222ENST00000473373 DLX1P56177 255 aa9.48□□□□□ -0.89
CPNE1-222ENST00000473373 LGALS4P56470 323 aa9.48□□□□□ -0.89
CPNE1-222ENST00000473373 NANOS3P60323 173 aaKnown RBP9.48□□□□□ -0.89
CPNE1-222ENST00000473373 ISL1P61371 349 aa9.48□□□□□ -0.89
CPNE1-222ENST00000473373 TRAPPC6BQ86SZ2 158 aa9.48□□□□□ -0.89
CPNE1-222ENST00000473373 SATL1Q86VE3 508 aa9.48□□□□□ -0.89
CPNE1-222ENST00000473373 LY6G5BQ8NDX9 201 aa9.48□□□□□ -0.89
CPNE1-222ENST00000473373 OR5D18Q8NGL1 313 aa9.48□□□□□ -0.89
CPNE1-222ENST00000473373 OR5D14Q8NGL3 314 aa9.48□□□□□ -0.89
CPNE1-222ENST00000473373 C8orf46Q8TAG6 207 aa9.48□□□□□ -0.89
CPNE1-222ENST00000473373 PPP1R35Q8TAP8 253 aa9.48□□□□□ -0.89
CPNE1-222ENST00000473373 HAVCR2Q8TDQ0 301 aa9.48□□□□□ -0.89
CPNE1-222ENST00000473373 SPSB1Q96BD6 273 aa9.48□□□□□ -0.89
CPNE1-222ENST00000473373 CPNE2Q96FN4 548 aaPredicted RBP9.48□□□□□ -0.89
CPNE1-222ENST00000473373 SDSLQ96GA7 329 aa9.48□□□□□ -0.89
CPNE1-222ENST00000473373 DMRTB1Q96MA1 342 aa9.48□□□□□ -0.89
CPNE1-222ENST00000473373 SPACA5Q96QH8 159 aa9.48□□□□□ -0.89
CPNE1-222ENST00000473373 NRIP2Q9BQI9 281 aa9.48□□□□□ -0.89
CPNE1-222ENST00000473373 ISG20L2Q9H9L3 353 aaKnown RBP9.48□□□□□ -0.89
CPNE1-222ENST00000473373 ZNF222Q9UK12 451 aa9.48□□□□□ -0.89
CPNE1-222ENST00000473373 SF3B6Q9Y3B4 125 aaKnown RBP9.48□□□□□ -0.89
CPNE1-222ENST00000473373 TENM1Q9UKZ4 2725 aa9.47□□□□□ -0.89
CPNE1-222ENST00000473373 MEGF8Q7Z7M0 2845 aa9.47□□□□□ -0.89
CPNE1-222ENST00000473373 CLDN34H7C241 214 aa9.47□□□□□ -0.89
CPNE1-222ENST00000473373 J3QRE1 110 aa9.47□□□□□ -0.89
CPNE1-222ENST00000473373 KCNAB3O43448 404 aa9.47□□□□□ -0.89
CPNE1-222ENST00000473373 NOS1APO75052 506 aaPredicted RBP9.47□□□□□ -0.89
CPNE1-222ENST00000473373 IGHA1P01876 353 aa9.47□□□□□ -0.89
CPNE1-222ENST00000473373 TK1P04183 234 aa9.47□□□□□ -0.89
CPNE1-222ENST00000473373 MELTFP08582 738 aa9.47□□□□□ -0.89
CPNE1-222ENST00000473373 CALCBP10092 127 aa9.47□□□□□ -0.89
CPNE1-222ENST00000473373 GABRB1P18505 474 aa9.47□□□□□ -0.89
CPNE1-222ENST00000473373 BCL3P20749 454 aa9.47□□□□□ -0.89
CPNE1-222ENST00000473373 MPZP25189 248 aa9.47□□□□□ -0.89
CPNE1-222ENST00000473373 SOX2P48431 317 aa9.47□□□□□ -0.89
CPNE1-222ENST00000473373 SCN1BQ07699 218 aa9.47□□□□□ -0.89
CPNE1-222ENST00000473373 SMN1Q16637 294 aaKnown RBP9.47□□□□□ -0.89
CPNE1-222ENST00000473373 ZNF691Q5VV52 312 aa9.47□□□□□ -0.89
CPNE1-222ENST00000473373 FDX2Q6P4F2 183 aa9.47□□□□□ -0.89
CPNE1-222ENST00000473373 Q6YL49 198 aa9.47□□□□□ -0.89
CPNE1-222ENST00000473373 Q6ZSR3 168 aa9.47□□□□□ -0.89
CPNE1-222ENST00000473373 UTS2BQ765I0 119 aa9.47□□□□□ -0.89
CPNE1-222ENST00000473373 SERPINA12Q8IW75 414 aa9.47□□□□□ -0.89
CPNE1-222ENST00000473373 C8orf59Q8N0T1 100 aaPredicted RBP9.47□□□□□ -0.89
CPNE1-222ENST00000473373 FAM58AQ8N1B3 248 aa9.47□□□□□ -0.89
CPNE1-222ENST00000473373 PACRGLQ8N7B6 248 aa9.47□□□□□ -0.89
CPNE1-222ENST00000473373 DNAAF1Q8NEP3 725 aa9.47□□□□□ -0.89
CPNE1-222ENST00000473373 OR51A4Q8NGJ6 313 aa9.47□□□□□ -0.89
CPNE1-222ENST00000473373 OR10AC1Q8NH08 325 aa9.47□□□□□ -0.89
CPNE1-222ENST00000473373 PDCD1LG2Q9BQ51 273 aa9.47□□□□□ -0.89
CPNE1-222ENST00000473373 FAM192AQ9GZU8 254 aa9.47□□□□□ -0.89
CPNE1-222ENST00000473373 ZCCHC4Q9H5U6 513 aa9.47□□□□□ -0.89
CPNE1-222ENST00000473373 HEXA-AS1Q9H8Q6 139 aa9.47□□□□□ -0.89
CPNE1-222ENST00000473373 C19orf12Q9NSK7 152 aa9.47□□□□□ -0.89
CPNE1-222ENST00000473373 GSTK1Q9Y2Q3 226 aa9.47□□□□□ -0.89
CPNE1-222ENST00000473373 EXOSC1Q9Y3B2 195 aaKnown RBP9.47□□□□□ -0.89
CPNE1-222ENST00000473373 POMT1Q9Y6A1 747 aa9.47□□□□□ -0.89
CPNE1-222ENST00000473373 IGKV1-27A0A075B6S5 117 aa9.46□□□□□ -0.9
CPNE1-222ENST00000473373 MEX3AA1L020 520 aaKnown RBP9.46□□□□□ -0.9
CPNE1-222ENST00000473373 FAM181BA6NEQ2 426 aa9.46□□□□□ -0.9
CPNE1-222ENST00000473373 OR4C45A6NMZ5 311 aa9.46□□□□□ -0.9
CPNE1-222ENST00000473373 RNASEK-C17orf49H0YIS7 233 aa9.46□□□□□ -0.9
CPNE1-222ENST00000473373 HAND1O96004 215 aa9.46□□□□□ -0.9
CPNE1-222ENST00000473373 TMEM225BP0DP42 221 aa9.46□□□□□ -0.9
CPNE1-222ENST00000473373 ZNF44P15621 663 aa9.46□□□□□ -0.9
CPNE1-222ENST00000473373 COX7A1P24310 79 aa9.46□□□□□ -0.9
CPNE1-222ENST00000473373 DCKP27707 260 aa9.46□□□□□ -0.9
CPNE1-222ENST00000473373 DUSP1P28562 367 aa9.46□□□□□ -0.9
CPNE1-222ENST00000473373 SAA4P35542 130 aa9.46□□□□□ -0.9
CPNE1-222ENST00000473373 ERVFRD-1P60508 538 aa9.46□□□□□ -0.9
CPNE1-222ENST00000473373 PPP3R1P63098 170 aa9.46□□□□□ -0.9
CPNE1-222ENST00000473373 GRK1Q15835 563 aa9.46□□□□□ -0.9
CPNE1-222ENST00000473373 METAP1DQ6UB28 335 aaPredicted RBP9.46□□□□□ -0.9
CPNE1-222ENST00000473373 ZNF782Q6ZMW2 699 aaPredicted RBP9.46□□□□□ -0.9
CPNE1-222ENST00000473373 PNKDQ8N490 385 aa9.46□□□□□ -0.9
CPNE1-222ENST00000473373 OR4F5Q8NH21 305 aa9.46□□□□□ -0.9
CPNE1-222ENST00000473373 APH1BQ8WW43 257 aa9.46□□□□□ -0.9
CPNE1-222ENST00000473373 C1orf147Q96MC9 270 aaPredicted RBP9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms