RNA–Protein interactions for RNA: ENST00000472217.1

USF1-204, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 1,097 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-204ENST00000472217 CLPXO76031 633 aa7.34□□□□□ -1.23
USF1-204ENST00000472217 SERPINA3P01011 423 aa7.34□□□□□ -1.23
USF1-204ENST00000472217 COX7A1P24310 79 aa7.34□□□□□ -1.23
USF1-204ENST00000472217 RBP2P50120 134 aa7.34□□□□□ -1.23
USF1-204ENST00000472217 BMXP51813 675 aa7.34□□□□□ -1.23
USF1-204ENST00000472217 DLX6P56179 175 aa7.34□□□□□ -1.23
USF1-204ENST00000472217 ERVFRD-1P60508 538 aa7.34□□□□□ -1.23
USF1-204ENST00000472217 TMEM244Q5VVB8 128 aa7.34□□□□□ -1.23
USF1-204ENST00000472217 MEDAGQ5VYS4 303 aa7.34□□□□□ -1.23
USF1-204ENST00000472217 FDX2Q6P4F2 183 aa7.34□□□□□ -1.23
USF1-204ENST00000472217 ZNF782Q6ZMW2 699 aaPredicted RBP7.34□□□□□ -1.23
USF1-204ENST00000472217 SLC25A26Q70HW3 274 aa7.34□□□□□ -1.23
USF1-204ENST00000472217 KCTD20Q7Z5Y7 419 aa7.34□□□□□ -1.23
USF1-204ENST00000472217 OR10AC1Q8NH08 325 aa7.34□□□□□ -1.23
USF1-204ENST00000472217 EMG1Q92979 244 aaKnown RBP7.34□□□□□ -1.23
USF1-204ENST00000472217 LGALS12Q96DT0 336 aa7.34□□□□□ -1.23
USF1-204ENST00000472217 SSX3Q99909 188 aa7.34□□□□□ -1.23
USF1-204ENST00000472217 PPA2Q9H2U2 334 aa7.34□□□□□ -1.23
USF1-204ENST00000472217 C16orf95Q9H693 158 aa7.34□□□□□ -1.23
USF1-204ENST00000472217 IL36RNQ9UBH0 155 aa7.34□□□□□ -1.23
USF1-204ENST00000472217 hCG_1809904A0A1W2PP81 198 aa7.33□□□□□ -1.24
USF1-204ENST00000472217 A0A1W2PPE2 198 aa7.33□□□□□ -1.24
USF1-204ENST00000472217 A0A1W2PR64 198 aa7.33□□□□□ -1.24
USF1-204ENST00000472217 A0A1W2PRV1 198 aa7.33□□□□□ -1.24
USF1-204ENST00000472217 TMEM82A0PJX8 343 aa7.33□□□□□ -1.24
USF1-204ENST00000472217 C17orf98A8MV24 154 aa7.33□□□□□ -1.24
USF1-204ENST00000472217 J3QLW9 94 aa7.33□□□□□ -1.24
USF1-204ENST00000472217 TSPAN9O75954 239 aa7.33□□□□□ -1.24
USF1-204ENST00000472217 IGHA1P01876 353 aa7.33□□□□□ -1.24
USF1-204ENST00000472217 ISG15P05161 165 aa7.33□□□□□ -1.24
USF1-204ENST00000472217 CHRM2P08172 466 aa7.33□□□□□ -1.24
USF1-204ENST00000472217 HTR1AP08908 422 aa7.33□□□□□ -1.24
USF1-204ENST00000472217 ZNF19P17023 458 aa7.33□□□□□ -1.24
USF1-204ENST00000472217 ZNF20P17024 532 aa7.33□□□□□ -1.24
USF1-204ENST00000472217 GABRB1P18505 474 aa7.33□□□□□ -1.24
USF1-204ENST00000472217 BCL3P20749 454 aa7.33□□□□□ -1.24
USF1-204ENST00000472217 AZGP1P25311 298 aaKnown RBP7.33□□□□□ -1.24
USF1-204ENST00000472217 TGFBR2P37173 567 aa7.33□□□□□ -1.24
USF1-204ENST00000472217 NPBWR2P48146 333 aa7.33□□□□□ -1.24
USF1-204ENST00000472217 POU3F4P49335 361 aa7.33□□□□□ -1.24
USF1-204ENST00000472217 CCR9P51686 369 aa7.33□□□□□ -1.24
USF1-204ENST00000472217 ATP1B3P54709 279 aa7.33□□□□□ -1.24
USF1-204ENST00000472217 EDDM3BP56851 147 aa7.33□□□□□ -1.24
USF1-204ENST00000472217 ZNF91Q05481 1191 aa7.33□□□□□ -1.24
USF1-204ENST00000472217 LY6EQ16553 131 aa7.33□□□□□ -1.24
USF1-204ENST00000472217 LRRC75BQ2VPJ9 315 aa7.33□□□□□ -1.24
USF1-204ENST00000472217 UTS2BQ765I0 119 aa7.33□□□□□ -1.24
USF1-204ENST00000472217 GDPD3Q7L5L3 318 aa7.33□□□□□ -1.24
USF1-204ENST00000472217 EGFL6Q8IUX8 553 aa7.33□□□□□ -1.24
USF1-204ENST00000472217 Q8IYB0 196 aa7.33□□□□□ -1.24
USF1-204ENST00000472217 ENTHD1Q8IYW4 607 aa7.33□□□□□ -1.24
USF1-204ENST00000472217 OR8H2Q8N162 312 aa7.33□□□□□ -1.24
USF1-204ENST00000472217 ACBD7Q8N6N7 88 aa7.33□□□□□ -1.24
USF1-204ENST00000472217 DNAAF1Q8NEP3 725 aa7.33□□□□□ -1.24
USF1-204ENST00000472217 OR51A4Q8NGJ6 313 aa7.33□□□□□ -1.24
USF1-204ENST00000472217 FGGYQ96C11 551 aa7.33□□□□□ -1.24
USF1-204ENST00000472217 PELI1Q96FA3 418 aa7.33□□□□□ -1.24
USF1-204ENST00000472217 C4orf36Q96KX1 117 aa7.33□□□□□ -1.24
USF1-204ENST00000472217 MEGF9Q9H1U4 602 aa7.33□□□□□ -1.24
USF1-204ENST00000472217 RBFOX1Q9NWB1 397 aaKnown RBP7.33□□□□□ -1.24
USF1-204ENST00000472217 EXOGQ9Y2C4 368 aaKnown RBP7.33□□□□□ -1.24
USF1-204ENST00000472217 MYRFQ9Y2G1 1151 aa7.33□□□□□ -1.24
USF1-204ENST00000472217 GMPPBQ9Y5P6 360 aa7.33□□□□□ -1.24
USF1-204ENST00000472217 MEGF8Q7Z7M0 2845 aa7.33□□□□□ -1.24
USF1-204ENST00000472217 MGAM2Q2M2H8 2515 aa7.33□□□□□ -1.24
USF1-204ENST00000472217 TRBV2A0A0J9YWF9 115 aa7.32□□□□□ -1.24
USF1-204ENST00000472217 SNTNA6NMZ2 147 aa7.32□□□□□ -1.24
USF1-204ENST00000472217 OR4C45A6NMZ5 311 aa7.32□□□□□ -1.24
USF1-204ENST00000472217 TIMM23O14925 209 aa7.32□□□□□ -1.24
USF1-204ENST00000472217 KCNAB3O43448 404 aa7.32□□□□□ -1.24
USF1-204ENST00000472217 HAND1O96004 215 aa7.32□□□□□ -1.24
USF1-204ENST00000472217 CYB5AP00167 134 aa7.32□□□□□ -1.24
USF1-204ENST00000472217 RBP4P02753 201 aa7.32□□□□□ -1.24
USF1-204ENST00000472217 ZNF728P0DKX0 622 aa7.32□□□□□ -1.24
USF1-204ENST00000472217 CALCBP10092 127 aa7.32□□□□□ -1.24
USF1-204ENST00000472217 DBTP11182 482 aaKnown RBP7.32□□□□□ -1.24
USF1-204ENST00000472217 ATF1P18846 271 aa7.32□□□□□ -1.24
USF1-204ENST00000472217 PRKACBP22694 351 aa7.32□□□□□ -1.24
USF1-204ENST00000472217 DUSP1P28562 367 aa7.32□□□□□ -1.24
USF1-204ENST00000472217 SNU13P55769 128 aaKnown RBP7.32□□□□□ -1.24
USF1-204ENST00000472217 MTCP1P56278 107 aa7.32□□□□□ -1.24
USF1-204ENST00000472217 LGALS4P56470 323 aa7.32□□□□□ -1.24
USF1-204ENST00000472217 ACTA2P62736 377 aa7.32□□□□□ -1.24
USF1-204ENST00000472217 ACTG2P63267 376 aa7.32□□□□□ -1.24
USF1-204ENST00000472217 ALKBH1Q13686 389 aaKnown RBP7.32□□□□□ -1.24
USF1-204ENST00000472217 EDDM3AQ14507 147 aa7.32□□□□□ -1.24
USF1-204ENST00000472217 AANATQ16613 207 aa7.32□□□□□ -1.24
USF1-204ENST00000472217 ASPHD2Q6ICH7 369 aa7.32□□□□□ -1.24
USF1-204ENST00000472217 SLC35E4Q6ICL7 350 aa7.32□□□□□ -1.24
USF1-204ENST00000472217 CRIP3Q6Q6R5 217 aa7.32□□□□□ -1.24
USF1-204ENST00000472217 LHFPL2Q6ZUX7 228 aa7.32□□□□□ -1.24
USF1-204ENST00000472217 TCF23Q7RTU1 214 aa7.32□□□□□ -1.24
USF1-204ENST00000472217 RNF144BQ7Z419 303 aa7.32□□□□□ -1.24
USF1-204ENST00000472217 LHFPL4Q7Z7J7 247 aa7.32□□□□□ -1.24
USF1-204ENST00000472217 FAM58AQ8N1B3 248 aa7.32□□□□□ -1.24
USF1-204ENST00000472217 TPRX1Q8N7U7 411 aa7.32□□□□□ -1.24
USF1-204ENST00000472217 OR52N4Q8NGI2 321 aa7.32□□□□□ -1.24
USF1-204ENST00000472217 OR13C3Q8NGS6 347 aa7.32□□□□□ -1.24
USF1-204ENST00000472217 OR13C9Q8NGT0 318 aa7.32□□□□□ -1.24
USF1-204ENST00000472217 PPP1R35Q8TAP8 253 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms