RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 TMEM138Q9NPI0 162 aa7.56□□□□□ -1.2
SF3A1-206ENST00000471037 TAS2R4Q9NYW5 299 aa7.56□□□□□ -1.2
SF3A1-206ENST00000471037 MRPL15Q9P015 296 aaKnown RBP7.56□□□□□ -1.2
SF3A1-206ENST00000471037 NOP16Q9Y3C1 178 aaKnown RBP7.56□□□□□ -1.2
SF3A1-206ENST00000471037 MPC1Q9Y5U8 109 aa7.56□□□□□ -1.2
SF3A1-206ENST00000471037 TGP01266 2768 aa7.56□□□□□ -1.2
SF3A1-206ENST00000471037 TRAV8-7A0A075B6U6 113 aa7.55□□□□□ -1.2
SF3A1-206ENST00000471037 IGHV2-70DA0A0C4DH43 119 aa7.55□□□□□ -1.2
SF3A1-206ENST00000471037 SHISA3A0PJX4 238 aa7.55□□□□□ -1.2
SF3A1-206ENST00000471037 TMEM178BH3BS89 294 aa7.55□□□□□ -1.2
SF3A1-206ENST00000471037 SULT1B1O43704 296 aa7.55□□□□□ -1.2
SF3A1-206ENST00000471037 GMDSO60547 372 aa7.55□□□□□ -1.2
SF3A1-206ENST00000471037 CDRT1O95170 752 aa7.55□□□□□ -1.2
SF3A1-206ENST00000471037 NRASP01111 189 aa7.55□□□□□ -1.2
SF3A1-206ENST00000471037 ALDOBP05062 364 aa7.55□□□□□ -1.2
SF3A1-206ENST00000471037 ATF1P18846 271 aa7.55□□□□□ -1.2
SF3A1-206ENST00000471037 RAB3BP20337 219 aa7.55□□□□□ -1.2
SF3A1-206ENST00000471037 PRKACBP22694 351 aa7.55□□□□□ -1.2
SF3A1-206ENST00000471037 TGFBR1P36897 503 aa7.55□□□□□ -1.2
SF3A1-206ENST00000471037 RBMXP38159 391 aaKnown RBP7.55□□□□□ -1.2
SF3A1-206ENST00000471037 SPCS2Q15005 226 aa7.55□□□□□ -1.2
SF3A1-206ENST00000471037 ASPHD2Q6ICH7 369 aa7.55□□□□□ -1.2
SF3A1-206ENST00000471037 BTNL3Q6UXE8 466 aa7.55□□□□□ -1.2
SF3A1-206ENST00000471037 LRRTM1Q86UE6 522 aa7.55□□□□□ -1.2
SF3A1-206ENST00000471037 CROCCP3Q8IVE0 287 aa7.55□□□□□ -1.2
SF3A1-206ENST00000471037 CDH26Q8IXH8 852 aa7.55□□□□□ -1.2
SF3A1-206ENST00000471037 OR1M1Q8NGA1 313 aa7.55□□□□□ -1.2
SF3A1-206ENST00000471037 NDNFQ8TB73 568 aa7.55□□□□□ -1.2
SF3A1-206ENST00000471037 WFDC12Q8WWY7 111 aa7.55□□□□□ -1.2
SF3A1-206ENST00000471037 SPSB1Q96BD6 273 aa7.55□□□□□ -1.2
SF3A1-206ENST00000471037 CPNE2Q96FN4 548 aaPredicted RBP7.55□□□□□ -1.2
SF3A1-206ENST00000471037 PAPOLGQ9BWT3 736 aaKnown RBP7.55□□□□□ -1.2
SF3A1-206ENST00000471037 SSBP3Q9BWW4 388 aaPredicted RBP7.55□□□□□ -1.2
SF3A1-206ENST00000471037 SLC22A4Q9H015 551 aa7.55□□□□□ -1.2
SF3A1-206ENST00000471037 GCM1Q9NP62 436 aa7.55□□□□□ -1.2
SF3A1-206ENST00000471037 RHBDD3Q9Y3P4 386 aa7.55□□□□□ -1.2
SF3A1-206ENST00000471037 TRAV40A0A0B4J280 105 aa7.54□□□□□ -1.2
SF3A1-206ENST00000471037 KIR2DS1A0A191URI9 304 aa7.54□□□□□ -1.2
SF3A1-206ENST00000471037 A6NIN4 97 aa7.54□□□□□ -1.2
SF3A1-206ENST00000471037 ANXA2P2A6NMY6 339 aa7.54□□□□□ -1.2
SF3A1-206ENST00000471037 MAGEB3O15480 346 aa7.54□□□□□ -1.2
SF3A1-206ENST00000471037 TMEM127O75204 238 aa7.54□□□□□ -1.2
SF3A1-206ENST00000471037 MAS1P04201 325 aa7.54□□□□□ -1.2
SF3A1-206ENST00000471037 OCMP0CE72 109 aaPredicted RBP7.54□□□□□ -1.2
SF3A1-206ENST00000471037 RPS2P15880 293 aaKnown RBP7.54□□□□□ -1.2
SF3A1-206ENST00000471037 BDKRB2P30411 391 aa7.54□□□□□ -1.2
SF3A1-206ENST00000471037 SOX6P35712 828 aa7.54□□□□□ -1.2
SF3A1-206ENST00000471037 RPS19P39019 145 aaKnown RBP7.54□□□□□ -1.2
SF3A1-206ENST00000471037 RANBP1P43487 201 aa7.54□□□□□ -1.2
SF3A1-206ENST00000471037 PRSS12P56730 875 aa7.54□□□□□ -1.2
SF3A1-206ENST00000471037 BPIFB3P59826 476 aa7.54□□□□□ -1.2
SF3A1-206ENST00000471037 PRDX4Q13162 271 aa7.54□□□□□ -1.2
SF3A1-206ENST00000471037 ZNF181Q2M3W8 571 aa7.54□□□□□ -1.2
SF3A1-206ENST00000471037 CNPY1Q3B7I2 92 aa7.54□□□□□ -1.2
SF3A1-206ENST00000471037 CEP78Q5JTW2 689 aa7.54□□□□□ -1.2
SF3A1-206ENST00000471037 PLCXD3Q63HM9 321 aa7.54□□□□□ -1.2
SF3A1-206ENST00000471037 ZDHHC23Q8IYP9 409 aa7.54□□□□□ -1.2
SF3A1-206ENST00000471037 OR5AS1Q8N127 324 aa7.54□□□□□ -1.2
SF3A1-206ENST00000471037 BHLHE23Q8NDY6 225 aa7.54□□□□□ -1.2
SF3A1-206ENST00000471037 DNAAF1Q8NEP3 725 aa7.54□□□□□ -1.2
SF3A1-206ENST00000471037 OR8G5Q8NG78 346 aa7.54□□□□□ -1.2
SF3A1-206ENST00000471037 OR51A2Q8NGJ7 313 aa7.54□□□□□ -1.2
SF3A1-206ENST00000471037 OR13C9Q8NGT0 318 aa7.54□□□□□ -1.2
SF3A1-206ENST00000471037 DYNC2LI1Q8TCX1 351 aa7.54□□□□□ -1.2
SF3A1-206ENST00000471037 RAB40AQ8WXH6 277 aa7.54□□□□□ -1.2
SF3A1-206ENST00000471037 PIGCQ92535 297 aa7.54□□□□□ -1.2
SF3A1-206ENST00000471037 TAF15Q92804 592 aaKnown RBP eCLIP7.54□□□□□ -1.2
SF3A1-206ENST00000471037 SLC25A46Q96AG3 418 aa7.54□□□□□ -1.2
SF3A1-206ENST00000471037 FOXRED1Q96CU9 486 aaPredicted RBP7.54□□□□□ -1.2
SF3A1-206ENST00000471037 ORAI1Q96D31 301 aa7.54□□□□□ -1.2
SF3A1-206ENST00000471037 HIST1H2AAQ96QV6 131 aa7.54□□□□□ -1.2
SF3A1-206ENST00000471037 SLC30A2Q9BRI3 323 aa7.54□□□□□ -1.2
SF3A1-206ENST00000471037 TMEM165Q9HC07 324 aa7.54□□□□□ -1.2
SF3A1-206ENST00000471037 CCDC59Q9P031 241 aaKnown RBP7.54□□□□□ -1.2
SF3A1-206ENST00000471037 MIOXQ9UGB7 285 aa7.54□□□□□ -1.2
SF3A1-206ENST00000471037 SLC7A11Q9UPY5 501 aa7.54□□□□□ -1.2
SF3A1-206ENST00000471037 V9GY05 133 aa7.54□□□□□ -1.2
SF3A1-206ENST00000471037 PRKDCP78527 4128 aaKnown RBP7.53□□□□□ -1.2
SF3A1-206ENST00000471037 IGHV3OR16-10A0A075B7F0 116 aa7.53□□□□□ -1.2
SF3A1-206ENST00000471037 IGKV1-9A0A0C4DH69 117 aa7.53□□□□□ -1.2
SF3A1-206ENST00000471037 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.53□□□□□ -1.2
SF3A1-206ENST00000471037 MDFIC2A0A1B0GVS7 189 aa7.53□□□□□ -1.2
SF3A1-206ENST00000471037 A0A1B0GWJ7 208 aa7.53□□□□□ -1.2
SF3A1-206ENST00000471037 OR5B21A6NL26 309 aa7.53□□□□□ -1.2
SF3A1-206ENST00000471037 ZNF850A8MQ14 1090 aa7.53□□□□□ -1.2
SF3A1-206ENST00000471037 NOTOA8MTQ0 251 aa7.53□□□□□ -1.2
SF3A1-206ENST00000471037 SRRM5B3KS81 715 aa7.53□□□□□ -1.2
SF3A1-206ENST00000471037 HOXA3O43365 443 aaPredicted RBP7.53□□□□□ -1.2
SF3A1-206ENST00000471037 KNG1P01042 644 aa7.53□□□□□ -1.2
SF3A1-206ENST00000471037 HCKP08631 526 aa7.53□□□□□ -1.2
SF3A1-206ENST00000471037 OMGP23515 440 aa7.53□□□□□ -1.2
SF3A1-206ENST00000471037 AZGP1P25311 298 aaKnown RBP7.53□□□□□ -1.2
SF3A1-206ENST00000471037 RORCP51449 518 aa7.53□□□□□ -1.2
SF3A1-206ENST00000471037 FUT6P51993 359 aa7.53□□□□□ -1.2
SF3A1-206ENST00000471037 GNB2P62879 340 aa7.53□□□□□ -1.2
SF3A1-206ENST00000471037 MXD1Q05195 221 aa7.53□□□□□ -1.2
SF3A1-206ENST00000471037 MZT1Q08AG7 82 aa7.53□□□□□ -1.2
SF3A1-206ENST00000471037 UBE2V2Q15819 145 aa7.53□□□□□ -1.2
SF3A1-206ENST00000471037 CEACAM21Q3KPI0 293 aa7.53□□□□□ -1.2
SF3A1-206ENST00000471037 ZNF404Q494X3 552 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms