RNA–Protein interactions for RNA: ENST00000469054.1

VPS13D-204, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-204ENST00000469054 MEGF11A6BM72 1044 aa9.94□□□□□ -0.82
VPS13D-204ENST00000469054 MAGEA13PA6NCF6 341 aa9.94□□□□□ -0.82
VPS13D-204ENST00000469054 NKX6-3A6NJ46 265 aa9.94□□□□□ -0.82
VPS13D-204ENST00000469054 KIAA1324LA8MWY0 1029 aaPredicted RBP9.94□□□□□ -0.82
VPS13D-204ENST00000469054 CCRL2O00421 344 aa9.94□□□□□ -0.82
VPS13D-204ENST00000469054 GABRPO00591 440 aa9.94□□□□□ -0.82
VPS13D-204ENST00000469054 DVL1O14640 695 aa9.94□□□□□ -0.82
VPS13D-204ENST00000469054 RGS9O75916 674 aaPredicted RBP9.94□□□□□ -0.82
VPS13D-204ENST00000469054 KNG1P01042 644 aa9.94□□□□□ -0.82
VPS13D-204ENST00000469054 TFF1P04155 84 aa9.94□□□□□ -0.82
VPS13D-204ENST00000469054 UCHL1P09936 223 aa9.94□□□□□ -0.82
VPS13D-204ENST00000469054 DUX4L2P0CJ85 424 aa9.94□□□□□ -0.82
VPS13D-204ENST00000469054 DUX4L3P0CJ86 424 aa9.94□□□□□ -0.82
VPS13D-204ENST00000469054 DUX4L4P0CJ87 422 aa9.94□□□□□ -0.82
VPS13D-204ENST00000469054 DUX4L5P0CJ88 424 aa9.94□□□□□ -0.82
VPS13D-204ENST00000469054 DUX4L6P0CJ89 424 aa9.94□□□□□ -0.82
VPS13D-204ENST00000469054 DUX4L7P0CJ90 424 aa9.94□□□□□ -0.82
VPS13D-204ENST00000469054 BCL3P20749 454 aa9.94□□□□□ -0.82
VPS13D-204ENST00000469054 PRDX2P32119 198 aa9.94□□□□□ -0.82
VPS13D-204ENST00000469054 GABRA2P47869 451 aa9.94□□□□□ -0.82
VPS13D-204ENST00000469054 GP2P55259 537 aaKnown RBP9.94□□□□□ -0.82
VPS13D-204ENST00000469054 HSD17B12Q53GQ0 312 aa9.94□□□□□ -0.82
VPS13D-204ENST00000469054 SYT6Q5T7P8 510 aaPredicted RBP9.94□□□□□ -0.82
VPS13D-204ENST00000469054 DUX4L9Q6RFH8 374 aaPredicted RBP9.94□□□□□ -0.82
VPS13D-204ENST00000469054 CDH26Q8IXH8 852 aa9.94□□□□□ -0.82
VPS13D-204ENST00000469054 FAM216BQ8N7L0 139 aa9.94□□□□□ -0.82
VPS13D-204ENST00000469054 TNFAIP8L1Q8WVP5 186 aa9.94□□□□□ -0.82
VPS13D-204ENST00000469054 EMG1Q92979 244 aaKnown RBP9.94□□□□□ -0.82
VPS13D-204ENST00000469054 MED30Q96HR3 178 aa9.94□□□□□ -0.82
VPS13D-204ENST00000469054 PPIL3Q9H2H8 161 aaKnown RBP9.94□□□□□ -0.82
VPS13D-204ENST00000469054 TCF7L1Q9HCS4 588 aa9.94□□□□□ -0.82
VPS13D-204ENST00000469054 RBFOX1Q9NWB1 397 aaKnown RBP9.94□□□□□ -0.82
VPS13D-204ENST00000469054 NDUFB11Q9NX14 153 aa9.94□□□□□ -0.82
VPS13D-204ENST00000469054 DUX4Q9UBX2 424 aa9.94□□□□□ -0.82
VPS13D-204ENST00000469054 ZNF222Q9UK12 451 aa9.94□□□□□ -0.82
VPS13D-204ENST00000469054 MAB21L2Q9Y586 359 aa9.94□□□□□ -0.82
VPS13D-204ENST00000469054 CELSR1Q9NYQ6 3014 aa9.94□□□□□ -0.82
VPS13D-204ENST00000469054 ANK3Q12955 4377 aaKnown RBP9.93□□□□□ -0.82
VPS13D-204ENST00000469054 SIGLEC5O15389 551 aa9.93□□□□□ -0.82
VPS13D-204ENST00000469054 NDUFB3O43676 98 aa9.93□□□□□ -0.82
VPS13D-204ENST00000469054 FCN3O75636 299 aa9.93□□□□□ -0.82
VPS13D-204ENST00000469054 SFTPBP07988 381 aa9.93□□□□□ -0.82
VPS13D-204ENST00000469054 SRMP19623 302 aa9.93□□□□□ -0.82
VPS13D-204ENST00000469054 PTGFRP43088 359 aa9.93□□□□□ -0.82
VPS13D-204ENST00000469054 IL13RA1P78552 427 aa9.93□□□□□ -0.82
VPS13D-204ENST00000469054 FABP5Q01469 135 aa9.93□□□□□ -0.82
VPS13D-204ENST00000469054 IKZF1Q13422 519 aa9.93□□□□□ -0.82
VPS13D-204ENST00000469054 NEDD8Q15843 81 aa9.93□□□□□ -0.82
VPS13D-204ENST00000469054 DGUOKQ16854 277 aa9.93□□□□□ -0.82
VPS13D-204ENST00000469054 LRRC10Q5BKY1 277 aa9.93□□□□□ -0.82
VPS13D-204ENST00000469054 FIP1L1Q6UN15 594 aaKnown RBP9.93□□□□□ -0.82
VPS13D-204ENST00000469054 ASCL4Q6XD76 172 aa9.93□□□□□ -0.82
VPS13D-204ENST00000469054 C1QL2Q7Z5L3 287 aa9.93□□□□□ -0.82
VPS13D-204ENST00000469054 FAM58AQ8N1B3 248 aa9.93□□□□□ -0.82
VPS13D-204ENST00000469054 CD177Q8N6Q3 437 aa9.93□□□□□ -0.82
VPS13D-204ENST00000469054 NKAIN3Q8N8D7 197 aa9.93□□□□□ -0.82
VPS13D-204ENST00000469054 PNLDC1Q8NA58 520 aaKnown RBP9.93□□□□□ -0.82
VPS13D-204ENST00000469054 SDSLQ96GA7 329 aa9.93□□□□□ -0.82
VPS13D-204ENST00000469054 GAFA1Q96PS6 74 aa9.93□□□□□ -0.82
VPS13D-204ENST00000469054 NR1H4Q96RI1 486 aaPredicted RBP9.93□□□□□ -0.82
VPS13D-204ENST00000469054 NKX3-1Q99801 234 aaPredicted RBP9.93□□□□□ -0.82
VPS13D-204ENST00000469054 FAM192AQ9GZU8 254 aa9.93□□□□□ -0.82
VPS13D-204ENST00000469054 RHOFQ9HBH0 211 aa9.93□□□□□ -0.82
VPS13D-204ENST00000469054 HMG20AQ9NP66 347 aa9.93□□□□□ -0.82
VPS13D-204ENST00000469054 MMP26Q9NRE1 261 aa9.93□□□□□ -0.82
VPS13D-204ENST00000469054 TMEM160Q9NX00 188 aa9.93□□□□□ -0.82
VPS13D-204ENST00000469054 OR14J1Q9UGF5 321 aa9.93□□□□□ -0.82
VPS13D-204ENST00000469054 OR5V1Q9UGF6 321 aa9.93□□□□□ -0.82
VPS13D-204ENST00000469054 LOC105371242A0A075B767 164 aa9.92□□□□□ -0.82
VPS13D-204ENST00000469054 A0A0G2JMP0 313 aa9.92□□□□□ -0.82
VPS13D-204ENST00000469054 A0A0X1KG70 313 aa9.92□□□□□ -0.82
VPS13D-204ENST00000469054 TRDV1A0A1B0GX56 115 aa9.92□□□□□ -0.82
VPS13D-204ENST00000469054 INAFM1C9JVW0 142 aa9.92□□□□□ -0.82
VPS13D-204ENST00000469054 ARL6IP5O75915 188 aa9.92□□□□□ -0.82
VPS13D-204ENST00000469054 CALCBP10092 127 aa9.92□□□□□ -0.82
VPS13D-204ENST00000469054 SELLP14151 372 aa9.92□□□□□ -0.82
VPS13D-204ENST00000469054 PRKACAP17612 351 aa9.92□□□□□ -0.82
VPS13D-204ENST00000469054 GATA3P23771 443 aa9.92□□□□□ -0.82
VPS13D-204ENST00000469054 OR3A4PP47883 348 aa9.92□□□□□ -0.82
VPS13D-204ENST00000469054 MTNR1BP49286 362 aa9.92□□□□□ -0.82
VPS13D-204ENST00000469054 BMXP51813 675 aa9.92□□□□□ -0.82
VPS13D-204ENST00000469054 CR1LQ2VPA4 569 aa9.92□□□□□ -0.82
VPS13D-204ENST00000469054 C11orf91Q3C1V1 193 aa9.92□□□□□ -0.82
VPS13D-204ENST00000469054 CD276Q5ZPR3 534 aa9.92□□□□□ -0.82
VPS13D-204ENST00000469054 ELP2Q6IA86 826 aa9.92□□□□□ -0.82
VPS13D-204ENST00000469054 FAHD2BQ6P2I3 314 aaPredicted RBP9.92□□□□□ -0.82
VPS13D-204ENST00000469054 CD200R1LQ6Q8B3 271 aa9.92□□□□□ -0.82
VPS13D-204ENST00000469054 LRRTM1Q86UE6 522 aa9.92□□□□□ -0.82
VPS13D-204ENST00000469054 LYPD6Q86Y78 171 aa9.92□□□□□ -0.82
VPS13D-204ENST00000469054 ZNF561Q8N587 486 aa9.92□□□□□ -0.82
VPS13D-204ENST00000469054 JAGN1Q8N5M9 183 aa9.92□□□□□ -0.82
VPS13D-204ENST00000469054 ZNRF1Q8ND25 227 aa9.92□□□□□ -0.82
VPS13D-204ENST00000469054 OR4M2Q8NGB6 313 aa9.92□□□□□ -0.82
VPS13D-204ENST00000469054 RAB40AQ8WXH6 277 aa9.92□□□□□ -0.82
VPS13D-204ENST00000469054 MUL1Q969V5 352 aa9.92□□□□□ -0.82
VPS13D-204ENST00000469054 FAHD2AQ96GK7 314 aa9.92□□□□□ -0.82
VPS13D-204ENST00000469054 SLITRK2Q9H156 845 aa9.92□□□□□ -0.82
VPS13D-204ENST00000469054 CNTD2Q9H8S5 307 aa9.92□□□□□ -0.82
VPS13D-204ENST00000469054 SEBOXQ9HB31 216 aaPredicted RBP9.92□□□□□ -0.82
VPS13D-204ENST00000469054 ELL3Q9HB65 397 aaPredicted RBP9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms