RNA–Protein interactions for RNA: ENST00000467985.1

COL7A1-207, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 709 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-207ENST00000467985 C17orf107Q6ZR85 190 aa15.62■□□□□ 0.09
COL7A1-207ENST00000467985 ANGPTL5Q86XS5 388 aa15.62■□□□□ 0.09
COL7A1-207ENST00000467985 CALHM1Q8IU99 346 aa15.62■□□□□ 0.09
COL7A1-207ENST00000467985 PRSS35Q8N3Z0 413 aa15.62■□□□□ 0.09
COL7A1-207ENST00000467985 CHST5Q9GZS9 411 aa15.62■□□□□ 0.09
COL7A1-207ENST00000467985 LOC107986453A0A1B0GWG9 222 aa15.61■□□□□ 0.09
COL7A1-207ENST00000467985 DAPL1A0PJW8 107 aa15.61■□□□□ 0.09
COL7A1-207ENST00000467985 CLPSL1A2RUU4 121 aa15.61■□□□□ 0.09
COL7A1-207ENST00000467985 GABRB1P18505 474 aa15.61■□□□□ 0.09
COL7A1-207ENST00000467985 CNN3Q15417 329 aaKnown RBP15.61■□□□□ 0.09
COL7A1-207ENST00000467985 UBE2V2Q15819 145 aa15.61■□□□□ 0.09
COL7A1-207ENST00000467985 MIDNQ504T8 468 aa15.61■□□□□ 0.09
COL7A1-207ENST00000467985 TP53I3Q53FA7 332 aa15.61■□□□□ 0.09
COL7A1-207ENST00000467985 TMEM244Q5VVB8 128 aa15.61■□□□□ 0.09
COL7A1-207ENST00000467985 OR5R1Q8NH85 324 aa15.61■□□□□ 0.09
COL7A1-207ENST00000467985 TRMT10AQ8TBZ6 339 aaKnown RBP15.61■□□□□ 0.09
COL7A1-207ENST00000467985 RNFT2Q96EX2 444 aa15.61■□□□□ 0.09
COL7A1-207ENST00000467985 MRPL48Q96GC5 212 aaKnown RBP15.61■□□□□ 0.09
COL7A1-207ENST00000467985 C19orf12Q9NSK7 152 aa15.61■□□□□ 0.09
COL7A1-207ENST00000467985 OR14J1Q9UGF5 321 aa15.61■□□□□ 0.09
COL7A1-207ENST00000467985 VPREB3Q9UKI3 123 aa15.61■□□□□ 0.09
COL7A1-207ENST00000467985 RPL36Q9Y3U8 105 aaKnown RBP15.61■□□□□ 0.09
COL7A1-207ENST00000467985 A0A1W2PRD5 423 aa15.6■□□□□ 0.09
COL7A1-207ENST00000467985 A0A1W2PRF3 423 aa15.6■□□□□ 0.09
COL7A1-207ENST00000467985 A0A1W2PRM7 423 aa15.6■□□□□ 0.09
COL7A1-207ENST00000467985 J3QRE1 110 aa15.6■□□□□ 0.09
COL7A1-207ENST00000467985 TK1P04183 234 aa15.6■□□□□ 0.09
COL7A1-207ENST00000467985 MED21Q13503 144 aa15.6■□□□□ 0.09
COL7A1-207ENST00000467985 FDX2Q6P4F2 183 aa15.6■□□□□ 0.09
COL7A1-207ENST00000467985 DNAAF1Q8NEP3 725 aa15.6■□□□□ 0.09
COL7A1-207ENST00000467985 OR2G2Q8NGZ5 317 aa15.6■□□□□ 0.09
COL7A1-207ENST00000467985 APH1BQ8WW43 257 aa15.6■□□□□ 0.09
COL7A1-207ENST00000467985 WFDC12Q8WWY7 111 aa15.6■□□□□ 0.09
COL7A1-207ENST00000467985 BORCS8Q96FH0 119 aa15.6■□□□□ 0.09
COL7A1-207ENST00000467985 CEP19Q96LK0 163 aa15.6■□□□□ 0.09
COL7A1-207ENST00000467985 HEXA-AS1Q9H8Q6 139 aa15.6■□□□□ 0.09
COL7A1-207ENST00000467985 K7N7A8 449 aa15.59■□□□□ 0.09
COL7A1-207ENST00000467985 ISG15P05161 165 aa15.59■□□□□ 0.09
COL7A1-207ENST00000467985 KIR3DL2P43630 455 aa15.59■□□□□ 0.09
COL7A1-207ENST00000467985 DLX1P56177 255 aa15.59■□□□□ 0.09
COL7A1-207ENST00000467985 ACTA2P62736 377 aa15.59■□□□□ 0.09
COL7A1-207ENST00000467985 ACTG2P63267 376 aa15.59■□□□□ 0.09
COL7A1-207ENST00000467985 PRB3Q04118 309 aaPredicted RBP15.59■□□□□ 0.09
COL7A1-207ENST00000467985 ZNF91Q05481 1191 aa15.59■□□□□ 0.09
COL7A1-207ENST00000467985 TAF9Q16594 264 aa15.59■□□□□ 0.09
COL7A1-207ENST00000467985 TMEM200BQ69YZ2 307 aa15.59■□□□□ 0.09
COL7A1-207ENST00000467985 Q8IYB0 196 aa15.59■□□□□ 0.09
COL7A1-207ENST00000467985 ACBD7Q8N6N7 88 aa15.59■□□□□ 0.09
COL7A1-207ENST00000467985 BEND2Q8NDZ0 799 aa15.59■□□□□ 0.09
COL7A1-207ENST00000467985 AMBNQ9NP70 447 aa15.59■□□□□ 0.09
COL7A1-207ENST00000467985 H3BSH0 61 aa15.58■□□□□ 0.08
COL7A1-207ENST00000467985 DENRO43583 198 aaKnown RBP15.58■□□□□ 0.08
COL7A1-207ENST00000467985 ANGPTL7O43827 346 aa15.58■□□□□ 0.08
COL7A1-207ENST00000467985 WBP4O75554 376 aaKnown RBP15.58■□□□□ 0.08
COL7A1-207ENST00000467985 CYB5AP00167 134 aa15.58■□□□□ 0.08
COL7A1-207ENST00000467985 CHRM2P08172 466 aa15.58■□□□□ 0.08
COL7A1-207ENST00000467985 RPSAP08865 295 aaKnown RBP15.58■□□□□ 0.08
COL7A1-207ENST00000467985 DBTP11182 482 aaKnown RBP15.58■□□□□ 0.08
COL7A1-207ENST00000467985 CEBPDP49716 269 aaPredicted RBP15.58■□□□□ 0.08
COL7A1-207ENST00000467985 RBP2P50120 134 aa15.58■□□□□ 0.08
COL7A1-207ENST00000467985 CCR9P51686 369 aa15.58■□□□□ 0.08
COL7A1-207ENST00000467985 ATP1B3P54709 279 aa15.58■□□□□ 0.08
COL7A1-207ENST00000467985 SMN1Q16637 294 aaKnown RBP15.58■□□□□ 0.08
COL7A1-207ENST00000467985 DHRS7BQ6IAN0 325 aaPredicted RBP15.58■□□□□ 0.08
COL7A1-207ENST00000467985 HCP5Q6MZN7 132 aa15.58■□□□□ 0.08
COL7A1-207ENST00000467985 SLC25A26Q70HW3 274 aa15.58■□□□□ 0.08
COL7A1-207ENST00000467985 UTS2BQ765I0 119 aa15.58■□□□□ 0.08
COL7A1-207ENST00000467985 EGFL6Q8IUX8 553 aa15.58■□□□□ 0.08
COL7A1-207ENST00000467985 PNKDQ8N490 385 aa15.58■□□□□ 0.08
COL7A1-207ENST00000467985 ZSCAN4Q8NAM6 433 aaPredicted RBP15.58■□□□□ 0.08
COL7A1-207ENST00000467985 BPIFB6Q8NFQ5 453 aa15.58■□□□□ 0.08
COL7A1-207ENST00000467985 RNF166Q96A37 237 aaPredicted RBP15.58■□□□□ 0.08
COL7A1-207ENST00000467985 SCN3BQ9NY72 215 aa15.58■□□□□ 0.08
COL7A1-207ENST00000467985 MTCH1Q9NZJ7 389 aa15.58■□□□□ 0.08
COL7A1-207ENST00000467985 EXOGQ9Y2C4 368 aaKnown RBP15.58■□□□□ 0.08
COL7A1-207ENST00000467985 IGKV1-27A0A075B6S5 117 aa15.57■□□□□ 0.08
COL7A1-207ENST00000467985 IRGMA1A4Y4 181 aa15.57■□□□□ 0.08
COL7A1-207ENST00000467985 HTR1AP08908 422 aa15.57■□□□□ 0.08
COL7A1-207ENST00000467985 ZNF20P17024 532 aa15.57■□□□□ 0.08
COL7A1-207ENST00000467985 PRKACBP22694 351 aa15.57■□□□□ 0.08
COL7A1-207ENST00000467985 TGFBR2P37173 567 aa15.57■□□□□ 0.08
COL7A1-207ENST00000467985 KLHL22Q53GT1 634 aa15.57■□□□□ 0.08
COL7A1-207ENST00000467985 MKXQ8IYA7 352 aa15.57■□□□□ 0.08
COL7A1-207ENST00000467985 RDH10Q8IZV5 341 aa15.57■□□□□ 0.08
COL7A1-207ENST00000467985 BATF2Q8N1L9 274 aa15.57■□□□□ 0.08
COL7A1-207ENST00000467985 ASCC1Q8N9N2 400 aaKnown RBP15.57■□□□□ 0.08
COL7A1-207ENST00000467985 OR4M1Q8NGD0 313 aa15.57■□□□□ 0.08
COL7A1-207ENST00000467985 SEBOXQ9HB31 216 aaPredicted RBP15.57■□□□□ 0.08
COL7A1-207ENST00000467985 FRRS1LQ9P0K9 344 aa15.57■□□□□ 0.08
COL7A1-207ENST00000467985 RNF114Q9Y508 228 aa15.57■□□□□ 0.08
COL7A1-207ENST00000467985 FADS2O95864 444 aaKnown RBP15.56■□□□□ 0.08
COL7A1-207ENST00000467985 OR12D2P58182 307 aa15.56■□□□□ 0.08
COL7A1-207ENST00000467985 ERVFRD-1P60508 538 aa15.56■□□□□ 0.08
COL7A1-207ENST00000467985 COL10A1Q03692 680 aa15.56■□□□□ 0.08
COL7A1-207ENST00000467985 AANATQ16613 207 aa15.56■□□□□ 0.08
COL7A1-207ENST00000467985 C6orf141Q5SZD1 244 aa15.56■□□□□ 0.08
COL7A1-207ENST00000467985 BRICD5Q6PL45 260 aa15.56■□□□□ 0.08
COL7A1-207ENST00000467985 GDPD3Q7L5L3 318 aa15.56■□□□□ 0.08
COL7A1-207ENST00000467985 LINC01006Q8NI28 216 aa15.56■□□□□ 0.08
COL7A1-207ENST00000467985 FBLIM1Q8WUP2 373 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms