RNA–Protein interactions for RNA: ENST00000466624.1

GPC1-207, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 782 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-207ENST00000466624 MRPS28Q9Y2Q9 187 aaKnown RBP13.37□□□□□ -0.27
GPC1-207ENST00000466624 AK6Q9Y3D8 172 aaKnown RBP13.37□□□□□ -0.27
GPC1-207ENST00000466624 V9GY05 133 aa13.37□□□□□ -0.27
GPC1-207ENST00000466624 MAST4O15021 2626 aa13.37□□□□□ -0.27
GPC1-207ENST00000466624 IGHV3OR15-7A0A075B7D8 119 aa13.36□□□□□ -0.27
GPC1-207ENST00000466624 F8VVB4 439 aa13.36□□□□□ -0.27
GPC1-207ENST00000466624 F8VWA3 439 aa13.36□□□□□ -0.27
GPC1-207ENST00000466624 H7C1Q1 480 aa13.36□□□□□ -0.27
GPC1-207ENST00000466624 SLC17A2O00624 439 aa13.36□□□□□ -0.27
GPC1-207ENST00000466624 SLC22A1O15245 554 aa13.36□□□□□ -0.27
GPC1-207ENST00000466624 SFTPBP07988 381 aa13.36□□□□□ -0.27
GPC1-207ENST00000466624 UBBP0CG47 229 aa13.36□□□□□ -0.27
GPC1-207ENST00000466624 PSG2P11465 335 aa13.36□□□□□ -0.27
GPC1-207ENST00000466624 RAB3BP20337 219 aa13.36□□□□□ -0.27
GPC1-207ENST00000466624 ZNF146Q15072 292 aa13.36□□□□□ -0.27
GPC1-207ENST00000466624 RSU1Q15404 277 aa13.36□□□□□ -0.27
GPC1-207ENST00000466624 SPIN3Q5JUX0 258 aa13.36□□□□□ -0.27
GPC1-207ENST00000466624 AWAT2Q6E213 333 aa13.36□□□□□ -0.27
GPC1-207ENST00000466624 FAM166AQ6J272 317 aa13.36□□□□□ -0.27
GPC1-207ENST00000466624 OR4D6Q8NGJ1 314 aa13.36□□□□□ -0.27
GPC1-207ENST00000466624 SEH1LQ96EE3 360 aa13.36□□□□□ -0.27
GPC1-207ENST00000466624 NEIL1Q96FI4 390 aaPredicted RBP13.36□□□□□ -0.27
GPC1-207ENST00000466624 NARFLQ9H6Q4 476 aa13.36□□□□□ -0.27
GPC1-207ENST00000466624 RBFOX1Q9NWB1 397 aaKnown RBP13.36□□□□□ -0.27
GPC1-207ENST00000466624 ZNF222Q9UK12 451 aa13.36□□□□□ -0.27
GPC1-207ENST00000466624 PCDHB10Q9UN67 800 aa13.36□□□□□ -0.27
GPC1-207ENST00000466624 ZNF469Q96JG9 3925 aaPredicted RBP13.35□□□□□ -0.27
GPC1-207ENST00000466624 IGKV1D-17A0A075B6S4 117 aa13.35□□□□□ -0.27
GPC1-207ENST00000466624 GABARAPO95166 117 aa13.35□□□□□ -0.27
GPC1-207ENST00000466624 GYPAP02724 150 aa13.35□□□□□ -0.27
GPC1-207ENST00000466624 WNT2P09544 360 aa13.35□□□□□ -0.27
GPC1-207ENST00000466624 FOSL1P15407 271 aa13.35□□□□□ -0.27
GPC1-207ENST00000466624 RPS2P15880 293 aaKnown RBP13.35□□□□□ -0.27
GPC1-207ENST00000466624 HTR2CP28335 458 aa13.35□□□□□ -0.27
GPC1-207ENST00000466624 GMFBP60983 142 aa13.35□□□□□ -0.27
GPC1-207ENST00000466624 FGF12P61328 243 aa13.35□□□□□ -0.27
GPC1-207ENST00000466624 DGUOKQ16854 277 aa13.35□□□□□ -0.27
GPC1-207ENST00000466624 NHLRC3Q5JS37 347 aa13.35□□□□□ -0.27
GPC1-207ENST00000466624 GLIPR1L1Q6UWM5 242 aa13.35□□□□□ -0.27
GPC1-207ENST00000466624 ZNF788Q6ZQV5 615 aa13.35□□□□□ -0.27
GPC1-207ENST00000466624 SLC16A12Q6ZSM3 486 aa13.35□□□□□ -0.27
GPC1-207ENST00000466624 NLRC3Q7RTR2 1065 aa13.35□□□□□ -0.27
GPC1-207ENST00000466624 SLC36A1Q7Z2H8 476 aa13.35□□□□□ -0.27
GPC1-207ENST00000466624 OR51T1Q8NGJ9 327 aa13.35□□□□□ -0.27
GPC1-207ENST00000466624 SDSLQ96GA7 329 aa13.35□□□□□ -0.27
GPC1-207ENST00000466624 C18orf12Q96KH6 178 aa13.35□□□□□ -0.27
GPC1-207ENST00000466624 C1orf147Q96MC9 270 aaPredicted RBP13.35□□□□□ -0.27
GPC1-207ENST00000466624 NKX3-1Q99801 234 aaPredicted RBP13.35□□□□□ -0.27
GPC1-207ENST00000466624 TMUB1Q9BVT8 246 aa13.35□□□□□ -0.27
GPC1-207ENST00000466624 ING4Q9UNL4 249 aa13.35□□□□□ -0.27
GPC1-207ENST00000466624 ABCA2Q9BZC7 2435 aa13.35□□□□□ -0.27
GPC1-207ENST00000466624 NKX6-3A6NJ46 265 aa13.34□□□□□ -0.27
GPC1-207ENST00000466624 CDRT1O95170 752 aa13.34□□□□□ -0.27
GPC1-207ENST00000466624 CSTBP04080 98 aaKnown RBP13.34□□□□□ -0.27
GPC1-207ENST00000466624 PRKACAP17612 351 aa13.34□□□□□ -0.27
GPC1-207ENST00000466624 AMY2BP19961 511 aa13.34□□□□□ -0.27
GPC1-207ENST00000466624 SDC2P34741 201 aa13.34□□□□□ -0.27
GPC1-207ENST00000466624 NPY4RP50391 375 aa13.34□□□□□ -0.27
GPC1-207ENST00000466624 CAPZA1P52907 286 aa13.34□□□□□ -0.27
GPC1-207ENST00000466624 LYPD2Q6UXB3 125 aa13.34□□□□□ -0.27
GPC1-207ENST00000466624 BATF2Q8N1L9 274 aa13.34□□□□□ -0.27
GPC1-207ENST00000466624 CIARTQ8N365 385 aaPredicted RBP13.34□□□□□ -0.27
GPC1-207ENST00000466624 OR8B3Q8NGG8 313 aa13.34□□□□□ -0.27
GPC1-207ENST00000466624 SLC25A28Q96A46 364 aa13.34□□□□□ -0.27
GPC1-207ENST00000466624 MRPS24Q96EL2 167 aaKnown RBP13.34□□□□□ -0.27
GPC1-207ENST00000466624 MED30Q96HR3 178 aa13.34□□□□□ -0.27
GPC1-207ENST00000466624 OR8B2Q96RD0 313 aa13.34□□□□□ -0.27
GPC1-207ENST00000466624 BCL7BQ9BQE9 202 aa13.34□□□□□ -0.27
GPC1-207ENST00000466624 RNF167Q9H6Y7 350 aa13.34□□□□□ -0.27
GPC1-207ENST00000466624 ELL3Q9HB65 397 aaPredicted RBP13.34□□□□□ -0.27
GPC1-207ENST00000466624 PLGRKTQ9HBL7 147 aa13.34□□□□□ -0.27
GPC1-207ENST00000466624 GLS2Q9UI32 602 aa13.34□□□□□ -0.27
GPC1-207ENST00000466624 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.34□□□□□ -0.27
GPC1-207ENST00000466624 A0A0G2JK05 382 aa13.33□□□□□ -0.28
GPC1-207ENST00000466624 RFPL4AA6NLU0 287 aa13.33□□□□□ -0.28
GPC1-207ENST00000466624 IFITM5A6NNB3 132 aa13.33□□□□□ -0.28
GPC1-207ENST00000466624 NOTOA8MTQ0 251 aa13.33□□□□□ -0.28
GPC1-207ENST00000466624 A8MXK9 166 aa13.33□□□□□ -0.28
GPC1-207ENST00000466624 RFPL4AL1F8VTS6 287 aa13.33□□□□□ -0.28
GPC1-207ENST00000466624 AIPO00170 330 aa13.33□□□□□ -0.28
GPC1-207ENST00000466624 SIGLEC5O15389 551 aa13.33□□□□□ -0.28
GPC1-207ENST00000466624 TMPRSS2O15393 492 aa13.33□□□□□ -0.28
GPC1-207ENST00000466624 ADAM20O43506 726 aa13.33□□□□□ -0.28
GPC1-207ENST00000466624 TMEM127O75204 238 aa13.33□□□□□ -0.28
GPC1-207ENST00000466624 HTR3BO95264 441 aa13.33□□□□□ -0.28
GPC1-207ENST00000466624 BPNT1O95861 308 aa13.33□□□□□ -0.28
GPC1-207ENST00000466624 IL2RGP31785 369 aa13.33□□□□□ -0.28
GPC1-207ENST00000466624 PRDX2P32119 198 aa13.33□□□□□ -0.28
GPC1-207ENST00000466624 GZMKP49863 264 aa13.33□□□□□ -0.28
GPC1-207ENST00000466624 IL13RA1P78552 427 aa13.33□□□□□ -0.28
GPC1-207ENST00000466624 IL13RA2Q14627 380 aa13.33□□□□□ -0.28
GPC1-207ENST00000466624 RAB11BQ15907 218 aa13.33□□□□□ -0.28
GPC1-207ENST00000466624 TMEM249Q2WGJ8 235 aa13.33□□□□□ -0.28
GPC1-207ENST00000466624 C11orf91Q3C1V1 193 aa13.33□□□□□ -0.28
GPC1-207ENST00000466624 GPR107Q5VW38 600 aa13.33□□□□□ -0.28
GPC1-207ENST00000466624 LINC00596Q86U02 117 aa13.33□□□□□ -0.28
GPC1-207ENST00000466624 NR2C2APQ86WQ0 139 aa13.33□□□□□ -0.28
GPC1-207ENST00000466624 OSR2Q8N2R0 312 aa13.33□□□□□ -0.28
GPC1-207ENST00000466624 ZNF561Q8N587 486 aa13.33□□□□□ -0.28
GPC1-207ENST00000466624 OR5T2Q8NGG2 359 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms