RNA–Protein interactions for RNA: ENST00000466260.1

RTFDC1-205, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-205ENST00000466260 PARP16Q8N5Y8 322 aa8.12□□□□□ -1.11
RTFDC1-205ENST00000466260 ACBD7Q8N6N7 88 aa8.12□□□□□ -1.11
RTFDC1-205ENST00000466260 SCCPDHQ8NBX0 429 aa8.12□□□□□ -1.11
RTFDC1-205ENST00000466260 OR14K1Q8NGZ2 314 aa8.12□□□□□ -1.11
RTFDC1-205ENST00000466260 ST8SIA4Q92187 359 aa8.12□□□□□ -1.11
RTFDC1-205ENST00000466260 SLC25A46Q96AG3 418 aa8.12□□□□□ -1.11
RTFDC1-205ENST00000466260 CCL13Q99616 98 aa8.12□□□□□ -1.11
RTFDC1-205ENST00000466260 MRI1Q9BV20 369 aa8.12□□□□□ -1.11
RTFDC1-205ENST00000466260 ALG8Q9BVK2 526 aa8.12□□□□□ -1.11
RTFDC1-205ENST00000466260 WDR13Q9H1Z4 485 aa8.12□□□□□ -1.11
RTFDC1-205ENST00000466260 ABCB9Q9NP78 766 aa8.12□□□□□ -1.11
RTFDC1-205ENST00000466260 ABCB10Q9NRK6 738 aa8.12□□□□□ -1.11
RTFDC1-205ENST00000466260 EXOGQ9Y2C4 368 aaKnown RBP8.12□□□□□ -1.11
RTFDC1-205ENST00000466260 CAB39Q9Y376 341 aaPredicted RBP8.12□□□□□ -1.11
RTFDC1-205ENST00000466260 V9GYS6 101 aa8.12□□□□□ -1.11
RTFDC1-205ENST00000466260 FAM230AA0A1W2PPH8 454 aa8.11□□□□□ -1.11
RTFDC1-205ENST00000466260 A8MXK9 166 aa8.11□□□□□ -1.11
RTFDC1-205ENST00000466260 SRRM5B3KS81 715 aa8.11□□□□□ -1.11
RTFDC1-205ENST00000466260 MAGEB3O15480 346 aa8.11□□□□□ -1.11
RTFDC1-205ENST00000466260 RGS5O15539 181 aa8.11□□□□□ -1.11
RTFDC1-205ENST00000466260 PLATP00750 562 aa8.11□□□□□ -1.11
RTFDC1-205ENST00000466260 EPHA1P21709 976 aa8.11□□□□□ -1.11
RTFDC1-205ENST00000466260 GLRA1P23415 457 aa8.11□□□□□ -1.11
RTFDC1-205ENST00000466260 HAAOP46952 286 aa8.11□□□□□ -1.11
RTFDC1-205ENST00000466260 GABRA2P47869 451 aa8.11□□□□□ -1.11
RTFDC1-205ENST00000466260 GNG3P63215 75 aa8.11□□□□□ -1.11
RTFDC1-205ENST00000466260 IKZF1Q13422 519 aa8.11□□□□□ -1.11
RTFDC1-205ENST00000466260 KCNJ8Q15842 424 aa8.11□□□□□ -1.11
RTFDC1-205ENST00000466260 SSX1Q16384 188 aa8.11□□□□□ -1.11
RTFDC1-205ENST00000466260 NDUFA5Q16718 116 aa8.11□□□□□ -1.11
RTFDC1-205ENST00000466260 KRTAP21-3Q3LHN1 58 aa8.11□□□□□ -1.11
RTFDC1-205ENST00000466260 CDONQ4KMG0 1287 aa8.11□□□□□ -1.11
RTFDC1-205ENST00000466260 ARSJQ5FYB0 599 aaPredicted RBP8.11□□□□□ -1.11
RTFDC1-205ENST00000466260 CLVS2Q5SYC1 327 aa8.11□□□□□ -1.11
RTFDC1-205ENST00000466260 HACD4Q5VWC8 232 aa8.11□□□□□ -1.11
RTFDC1-205ENST00000466260 WDR25Q64LD2 544 aaPredicted RBP8.11□□□□□ -1.11
RTFDC1-205ENST00000466260 CD200R1LQ6Q8B3 271 aa8.11□□□□□ -1.11
RTFDC1-205ENST00000466260 BTNL3Q6UXE8 466 aa8.11□□□□□ -1.11
RTFDC1-205ENST00000466260 AKAP14Q86UN6 197 aa8.11□□□□□ -1.11
RTFDC1-205ENST00000466260 ZNF488Q96MN9 340 aa8.11□□□□□ -1.11
RTFDC1-205ENST00000466260 OR5M11Q96RB7 305 aa8.11□□□□□ -1.11
RTFDC1-205ENST00000466260 MDFIQ99750 246 aa8.11□□□□□ -1.11
RTFDC1-205ENST00000466260 NEURL2Q9BR09 285 aa8.11□□□□□ -1.11
RTFDC1-205ENST00000466260 CENPOQ9BU64 300 aa8.11□□□□□ -1.11
RTFDC1-205ENST00000466260 ISG20L2Q9H9L3 353 aaKnown RBP8.11□□□□□ -1.11
RTFDC1-205ENST00000466260 INSIG2Q9Y5U4 225 aa8.11□□□□□ -1.11
RTFDC1-205ENST00000466260 AUP1Q9Y679 476 aa8.11□□□□□ -1.11
RTFDC1-205ENST00000466260 NF1P21359 2839 aa8.1□□□□□ -1.11
RTFDC1-205ENST00000466260 TRAV40A0A0B4J280 105 aa8.1□□□□□ -1.11
RTFDC1-205ENST00000466260 IGHV2-70DA0A0C4DH43 119 aa8.1□□□□□ -1.11
RTFDC1-205ENST00000466260 ANKRD61A6NGH8 418 aa8.1□□□□□ -1.11
RTFDC1-205ENST00000466260 OR5B21A6NL26 309 aa8.1□□□□□ -1.11
RTFDC1-205ENST00000466260 RNF212BA8MTL3 300 aa8.1□□□□□ -1.11
RTFDC1-205ENST00000466260 J3QLI3 93 aa8.1□□□□□ -1.11
RTFDC1-205ENST00000466260 J3QRE1 110 aa8.1□□□□□ -1.11
RTFDC1-205ENST00000466260 DVL1O14640 695 aa8.1□□□□□ -1.11
RTFDC1-205ENST00000466260 SYNGR1O43759 233 aa8.1□□□□□ -1.11
RTFDC1-205ENST00000466260 GPX5O75715 221 aa8.1□□□□□ -1.11
RTFDC1-205ENST00000466260 SERPINA3P01011 423 aa8.1□□□□□ -1.11
RTFDC1-205ENST00000466260 LHBP01229 141 aa8.1□□□□□ -1.11
RTFDC1-205ENST00000466260 IGHA1P01876 353 aa8.1□□□□□ -1.11
RTFDC1-205ENST00000466260 UBCP0CG48 685 aaKnown RBP8.1□□□□□ -1.11
RTFDC1-205ENST00000466260 SELLP14151 372 aa8.1□□□□□ -1.11
RTFDC1-205ENST00000466260 GATA3P23771 443 aa8.1□□□□□ -1.11
RTFDC1-205ENST00000466260 NANOS3P60323 173 aaKnown RBP8.1□□□□□ -1.11
RTFDC1-205ENST00000466260 ACTA2P62736 377 aa8.1□□□□□ -1.11
RTFDC1-205ENST00000466260 ACTG2P63267 376 aa8.1□□□□□ -1.11
RTFDC1-205ENST00000466260 CBX3Q13185 183 aa8.1□□□□□ -1.11
RTFDC1-205ENST00000466260 MICBQ29980 383 aa8.1□□□□□ -1.11
RTFDC1-205ENST00000466260 CEACAM21Q3KPI0 293 aa8.1□□□□□ -1.11
RTFDC1-205ENST00000466260 TEX36Q5VZQ5 186 aa8.1□□□□□ -1.11
RTFDC1-205ENST00000466260 STEAP3Q658P3 488 aa8.1□□□□□ -1.11
RTFDC1-205ENST00000466260 MZT2BQ6NZ67 158 aa8.1□□□□□ -1.11
RTFDC1-205ENST00000466260 C1QL2Q7Z5L3 287 aa8.1□□□□□ -1.11
RTFDC1-205ENST00000466260 TPRA1Q86W33 373 aa8.1□□□□□ -1.11
RTFDC1-205ENST00000466260 FAM216BQ8N7L0 139 aa8.1□□□□□ -1.11
RTFDC1-205ENST00000466260 ZNF676Q8N7Q3 588 aa8.1□□□□□ -1.11
RTFDC1-205ENST00000466260 OR5A2Q8NGI9 324 aa8.1□□□□□ -1.11
RTFDC1-205ENST00000466260 OR2G2Q8NGZ5 317 aa8.1□□□□□ -1.11
RTFDC1-205ENST00000466260 OR10AC1Q8NH08 325 aa8.1□□□□□ -1.11
RTFDC1-205ENST00000466260 NANPQ8TBE9 248 aa8.1□□□□□ -1.11
RTFDC1-205ENST00000466260 RAB40AQ8WXH6 277 aa8.1□□□□□ -1.11
RTFDC1-205ENST00000466260 H1FXQ92522 213 aaKnown RBP8.1□□□□□ -1.11
RTFDC1-205ENST00000466260 ITFG2Q969R8 447 aa8.1□□□□□ -1.11
RTFDC1-205ENST00000466260 PELI1Q96FA3 418 aa8.1□□□□□ -1.11
RTFDC1-205ENST00000466260 NUDT16L1Q9BRJ7 211 aaKnown RBP8.1□□□□□ -1.11
RTFDC1-205ENST00000466260 TRIM36Q9NQ86 728 aa8.1□□□□□ -1.11
RTFDC1-205ENST00000466260 TXNL4BQ9NX01 149 aaKnown RBP8.1□□□□□ -1.11
RTFDC1-205ENST00000466260 ERVK13-1Q9NX77 482 aa8.1□□□□□ -1.11
RTFDC1-205ENST00000466260 OPN4Q9UHM6 478 aa8.1□□□□□ -1.11
RTFDC1-205ENST00000466260 NKX6-3A6NJ46 265 aa8.09□□□□□ -1.11
RTFDC1-205ENST00000466260 C22orf46C9J442 243 aa8.09□□□□□ -1.11
RTFDC1-205ENST00000466260 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.09□□□□□ -1.11
RTFDC1-205ENST00000466260 TCF21O43680 179 aa8.09□□□□□ -1.11
RTFDC1-205ENST00000466260 ZNF20P17024 532 aa8.09□□□□□ -1.11
RTFDC1-205ENST00000466260 CCL1P22362 96 aa8.09□□□□□ -1.11
RTFDC1-205ENST00000466260 TNFSF8P32971 234 aa8.09□□□□□ -1.11
RTFDC1-205ENST00000466260 CEBPDP49716 269 aaPredicted RBP8.09□□□□□ -1.11
RTFDC1-205ENST00000466260 EIF2B2P49770 351 aaKnown RBP8.09□□□□□ -1.11
RTFDC1-205ENST00000466260 MRPL28Q13084 256 aaKnown RBP8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms