RNA–Protein interactions for RNA: ENST00000462352.5

CPNE1-221, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-221ENST00000462352 DUX4L3P0CJ86 424 aa9.83□□□□□ -0.84
CPNE1-221ENST00000462352 DUX4L4P0CJ87 422 aa9.83□□□□□ -0.84
CPNE1-221ENST00000462352 DUX4L5P0CJ88 424 aa9.83□□□□□ -0.84
CPNE1-221ENST00000462352 DUX4L6P0CJ89 424 aa9.83□□□□□ -0.84
CPNE1-221ENST00000462352 DUX4L7P0CJ90 424 aa9.83□□□□□ -0.84
CPNE1-221ENST00000462352 CALCBP10092 127 aa9.83□□□□□ -0.84
CPNE1-221ENST00000462352 CPT2P23786 658 aa9.83□□□□□ -0.84
CPNE1-221ENST00000462352 FGF9P31371 208 aaPredicted RBP9.83□□□□□ -0.84
CPNE1-221ENST00000462352 GZMKP49863 264 aa9.83□□□□□ -0.84
CPNE1-221ENST00000462352 KRTAP1-1Q07627 177 aa9.83□□□□□ -0.84
CPNE1-221ENST00000462352 ATPAF1Q5TC12 328 aaPredicted RBP9.83□□□□□ -0.84
CPNE1-221ENST00000462352 GLT8D1Q68CQ7 371 aa9.83□□□□□ -0.84
CPNE1-221ENST00000462352 DUX4L9Q6RFH8 374 aaPredicted RBP9.83□□□□□ -0.84
CPNE1-221ENST00000462352 ASCL4Q6XD76 172 aa9.83□□□□□ -0.84
CPNE1-221ENST00000462352 ZNF788Q6ZQV5 615 aa9.83□□□□□ -0.84
CPNE1-221ENST00000462352 NLRC3Q7RTR2 1065 aa9.83□□□□□ -0.84
CPNE1-221ENST00000462352 FAM58AQ8N1B3 248 aa9.83□□□□□ -0.84
CPNE1-221ENST00000462352 FAM216BQ8N7L0 139 aa9.83□□□□□ -0.84
CPNE1-221ENST00000462352 OR8B3Q8NGG8 313 aa9.83□□□□□ -0.84
CPNE1-221ENST00000462352 FOXRED1Q96CU9 486 aaPredicted RBP9.83□□□□□ -0.84
CPNE1-221ENST00000462352 MSI2Q96DH6 328 aaKnown RBP9.83□□□□□ -0.84
CPNE1-221ENST00000462352 YIPF6Q96EC8 236 aa9.83□□□□□ -0.84
CPNE1-221ENST00000462352 OR8B2Q96RD0 313 aa9.83□□□□□ -0.84
CPNE1-221ENST00000462352 S100A13Q99584 98 aa9.83□□□□□ -0.84
CPNE1-221ENST00000462352 GFI1Q99684 422 aa9.83□□□□□ -0.84
CPNE1-221ENST00000462352 SMR3AQ99954 134 aa9.83□□□□□ -0.84
CPNE1-221ENST00000462352 CHCHD6Q9BRQ6 235 aa9.83□□□□□ -0.84
CPNE1-221ENST00000462352 UQCC2Q9BRT2 126 aa9.83□□□□□ -0.84
CPNE1-221ENST00000462352 DNTTIP1Q9H147 329 aa9.83□□□□□ -0.84
CPNE1-221ENST00000462352 CNTD2Q9H8S5 307 aa9.83□□□□□ -0.84
CPNE1-221ENST00000462352 ELL3Q9HB65 397 aaPredicted RBP9.83□□□□□ -0.84
CPNE1-221ENST00000462352 RHOFQ9HBH0 211 aa9.83□□□□□ -0.84
CPNE1-221ENST00000462352 IL36RNQ9UBH0 155 aa9.83□□□□□ -0.84
CPNE1-221ENST00000462352 DUX4Q9UBX2 424 aa9.83□□□□□ -0.84
CPNE1-221ENST00000462352 OR14J1Q9UGF5 321 aa9.83□□□□□ -0.84
CPNE1-221ENST00000462352 TRAV1-2A0A0B4J238 106 aa9.82□□□□□ -0.84
CPNE1-221ENST00000462352 NKX6-3A6NJ46 265 aa9.82□□□□□ -0.84
CPNE1-221ENST00000462352 B4DSR2 109 aa9.82□□□□□ -0.84
CPNE1-221ENST00000462352 TFAP2AP05549 437 aa9.82□□□□□ -0.84
CPNE1-221ENST00000462352 CD37P11049 281 aa9.82□□□□□ -0.84
CPNE1-221ENST00000462352 ZNF16P17020 682 aaPredicted RBP9.82□□□□□ -0.84
CPNE1-221ENST00000462352 PRKACAP17612 351 aa9.82□□□□□ -0.84
CPNE1-221ENST00000462352 MYL9P24844 172 aa9.82□□□□□ -0.84
CPNE1-221ENST00000462352 PRDX2P32119 198 aa9.82□□□□□ -0.84
CPNE1-221ENST00000462352 GABRA2P47869 451 aa9.82□□□□□ -0.84
CPNE1-221ENST00000462352 PITPNBP48739 271 aa9.82□□□□□ -0.84
CPNE1-221ENST00000462352 CEBPDP49716 269 aaPredicted RBP9.82□□□□□ -0.84
CPNE1-221ENST00000462352 RSU1Q15404 277 aa9.82□□□□□ -0.84
CPNE1-221ENST00000462352 ESCO2Q56NI9 601 aa9.82□□□□□ -0.84
CPNE1-221ENST00000462352 CYB5R2Q6BCY4 276 aa9.82□□□□□ -0.84
CPNE1-221ENST00000462352 ZNF841Q6ZN19 808 aa9.82□□□□□ -0.84
CPNE1-221ENST00000462352 SLC36A1Q7Z2H8 476 aa9.82□□□□□ -0.84
CPNE1-221ENST00000462352 CD177Q8N6Q3 437 aa9.82□□□□□ -0.84
CPNE1-221ENST00000462352 LINC01356Q8N9X3 169 aa9.82□□□□□ -0.84
CPNE1-221ENST00000462352 OR4D6Q8NGJ1 314 aa9.82□□□□□ -0.84
CPNE1-221ENST00000462352 OR13F1Q8NGS4 319 aa9.82□□□□□ -0.84
CPNE1-221ENST00000462352 OR10K1Q8NGX5 313 aa9.82□□□□□ -0.84
CPNE1-221ENST00000462352 GAFA1Q96PS6 74 aa9.82□□□□□ -0.84
CPNE1-221ENST00000462352 METTL9Q9H1A3 318 aa9.82□□□□□ -0.84
CPNE1-221ENST00000462352 LPAR2Q9HBW0 351 aa9.82□□□□□ -0.84
CPNE1-221ENST00000462352 HMG20AQ9NP66 347 aa9.82□□□□□ -0.84
CPNE1-221ENST00000462352 ING4Q9UNL4 249 aa9.82□□□□□ -0.84
CPNE1-221ENST00000462352 GSTK1Q9Y2Q3 226 aa9.82□□□□□ -0.84
CPNE1-221ENST00000462352 MRPS28Q9Y2Q9 187 aaKnown RBP9.82□□□□□ -0.84
CPNE1-221ENST00000462352 AK6Q9Y3D8 172 aaKnown RBP9.82□□□□□ -0.84
CPNE1-221ENST00000462352 CSPG4Q6UVK1 2322 aa9.82□□□□□ -0.84
CPNE1-221ENST00000462352 YLPM1P49750 1951 aaKnown RBP9.81□□□□□ -0.84
CPNE1-221ENST00000462352 LOC100506127A0A0U1RQW1 187 aa9.81□□□□□ -0.84
CPNE1-221ENST00000462352 A8MXK9 166 aa9.81□□□□□ -0.84
CPNE1-221ENST00000462352 DVL1O14640 695 aa9.81□□□□□ -0.84
CPNE1-221ENST00000462352 PDCD5O14737 125 aa9.81□□□□□ -0.84
CPNE1-221ENST00000462352 SIGLEC5O15389 551 aa9.81□□□□□ -0.84
CPNE1-221ENST00000462352 PHF1O43189 567 aaPredicted RBP9.81□□□□□ -0.84
CPNE1-221ENST00000462352 CD5LO43866 347 aa9.81□□□□□ -0.84
CPNE1-221ENST00000462352 FCN3O75636 299 aa9.81□□□□□ -0.84
CPNE1-221ENST00000462352 LY6G6DO95868 133 aa9.81□□□□□ -0.84
CPNE1-221ENST00000462352 TGFAP01135 160 aa9.81□□□□□ -0.84
CPNE1-221ENST00000462352 MSMBP08118 114 aa9.81□□□□□ -0.84
CPNE1-221ENST00000462352 SELLP14151 372 aa9.81□□□□□ -0.84
CPNE1-221ENST00000462352 ZFP36P26651 326 aaKnown RBP9.81□□□□□ -0.84
CPNE1-221ENST00000462352 ALDH3B2P48448 385 aa9.81□□□□□ -0.84
CPNE1-221ENST00000462352 MTNR1BP49286 362 aa9.81□□□□□ -0.84
CPNE1-221ENST00000462352 SNU13P55769 128 aaKnown RBP9.81□□□□□ -0.84
CPNE1-221ENST00000462352 GNB2P62879 340 aa9.81□□□□□ -0.84
CPNE1-221ENST00000462352 IL13RA1P78552 427 aa9.81□□□□□ -0.84
CPNE1-221ENST00000462352 LCN2P80188 198 aa9.81□□□□□ -0.84
CPNE1-221ENST00000462352 IKZF1Q13422 519 aa9.81□□□□□ -0.84
CPNE1-221ENST00000462352 ZNF146Q15072 292 aa9.81□□□□□ -0.84
CPNE1-221ENST00000462352 TIMM50Q3ZCQ8 353 aa9.81□□□□□ -0.84
CPNE1-221ENST00000462352 SPIN3Q5JUX0 258 aa9.81□□□□□ -0.84
CPNE1-221ENST00000462352 C1orf100Q5SVJ3 147 aa9.81□□□□□ -0.84
CPNE1-221ENST00000462352 WDR25Q64LD2 544 aaPredicted RBP9.81□□□□□ -0.84
CPNE1-221ENST00000462352 AWAT2Q6E213 333 aa9.81□□□□□ -0.84
CPNE1-221ENST00000462352 ELP2Q6IA86 826 aa9.81□□□□□ -0.84
CPNE1-221ENST00000462352 FIP1L1Q6UN15 594 aaKnown RBP9.81□□□□□ -0.84
CPNE1-221ENST00000462352 GLIPR1L1Q6UWM5 242 aa9.81□□□□□ -0.84
CPNE1-221ENST00000462352 GDPGP1Q6ZNW5 385 aa9.81□□□□□ -0.84
CPNE1-221ENST00000462352 BIVMQ86UB2 503 aa9.81□□□□□ -0.84
CPNE1-221ENST00000462352 Q8NFD4 153 aa9.81□□□□□ -0.84
CPNE1-221ENST00000462352 TBC1D15Q8TC07 691 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms