RNA–Protein interactions for RNA: ENST00000458893.1

SNORD42B-201, Transcript of small nucleolar RNA, C/D box 42B, humanhuman

BASIC

Gene SNORD42B, Length 67 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD42B-201ENST00000458893 SRRQ9GZT4 340 aa-1.11□□□□□ -2.59
SNORD42B-201ENST00000458893 MRM3Q9HC36 420 aaKnown RBP-1.11□□□□□ -2.59
SNORD42B-201ENST00000458893 VAT1LQ9HCJ6 419 aa-1.11□□□□□ -2.59
SNORD42B-201ENST00000458893 OR5AC2Q9NZP5 309 aa-1.11□□□□□ -2.59
SNORD42B-201ENST00000458893 TRIM10Q9UDY6 481 aa-1.11□□□□□ -2.59
SNORD42B-201ENST00000458893 KLK9Q9UKQ9 250 aa-1.11□□□□□ -2.59
SNORD42B-201ENST00000458893 B9D1Q9UPM9 204 aa-1.11□□□□□ -2.59
SNORD42B-201ENST00000458893 CHMP2BQ9UQN3 213 aa-1.11□□□□□ -2.59
SNORD42B-201ENST00000458893 DENND4CQ5VZ89 1909 aa-1.11□□□□□ -2.59
SNORD42B-201ENST00000458893 COL18A1P39060 1754 aa-1.11□□□□□ -2.59
SNORD42B-201ENST00000458893 PKD1L1Q8TDX9 2849 aa-1.11□□□□□ -2.59
SNORD42B-201ENST00000458893 HYDINQ4G0P3 5121 aa-1.12□□□□□ -2.59
SNORD42B-201ENST00000458893 NPHP4O75161 1426 aaPredicted RBP-1.12□□□□□ -2.59
SNORD42B-201ENST00000458893 AK9Q5TCS8 1911 aa-1.12□□□□□ -2.59
SNORD42B-201ENST00000458893 TRAV14DV4A0A0A6YYC5 116 aa-1.12□□□□□ -2.59
SNORD42B-201ENST00000458893 TRAV8-6A0A0B4J262 113 aa-1.12□□□□□ -2.59
SNORD42B-201ENST00000458893 A4D1N5 150 aa-1.12□□□□□ -2.59
SNORD42B-201ENST00000458893 TMEM235A6NFC5 223 aa-1.12□□□□□ -2.59
SNORD42B-201ENST00000458893 H3BPC8 53 aa-1.12□□□□□ -2.59
SNORD42B-201ENST00000458893 H7C1H1 209 aa-1.12□□□□□ -2.59
SNORD42B-201ENST00000458893 MYL12BO14950 172 aa-1.12□□□□□ -2.59
SNORD42B-201ENST00000458893 PSPHP1O15172 72 aa-1.12□□□□□ -2.59
SNORD42B-201ENST00000458893 UBDO15205 165 aa-1.12□□□□□ -2.59
SNORD42B-201ENST00000458893 OR1F1O43749 312 aa-1.12□□□□□ -2.59
SNORD42B-201ENST00000458893 CREB3O43889 395 aa-1.12□□□□□ -2.59
SNORD42B-201ENST00000458893 SSX5O60225 188 aa-1.12□□□□□ -2.59
SNORD42B-201ENST00000458893 RAMP3O60896 148 aa-1.12□□□□□ -2.59
SNORD42B-201ENST00000458893 SOD1P00441 154 aa-1.12□□□□□ -2.59
SNORD42B-201ENST00000458893 CRYGDP07320 174 aa-1.12□□□□□ -2.59
SNORD42B-201ENST00000458893 OR4A8P0C604 315 aa-1.12□□□□□ -2.59
SNORD42B-201ENST00000458893 OR4Q2P0C623 313 aa-1.12□□□□□ -2.59
SNORD42B-201ENST00000458893 GGT2P36268 569 aa-1.12□□□□□ -2.59
SNORD42B-201ENST00000458893 VHLP40337 213 aa-1.12□□□□□ -2.59
SNORD42B-201ENST00000458893 GRIA1P42261 906 aa-1.12□□□□□ -2.59
SNORD42B-201ENST00000458893 ACTR1AP61163 376 aa-1.12□□□□□ -2.59
SNORD42B-201ENST00000458893 PJVKQ0ZLH3 352 aa-1.12□□□□□ -2.59
SNORD42B-201ENST00000458893 WDR43Q15061 677 aaKnown RBP eCLIP-1.12□□□□□ -2.591e-323■□□□□ 10.7
SNORD42B-201ENST00000458893 BLOC1S2Q6QNY1 142 aa-1.12□□□□□ -2.59
SNORD42B-201ENST00000458893 NPSR1Q6W5P4 371 aa-1.12□□□□□ -2.59
SNORD42B-201ENST00000458893 SCGB1D4Q6XE38 83 aa-1.12□□□□□ -2.59
SNORD42B-201ENST00000458893 WDR88Q6ZMY6 472 aa-1.12□□□□□ -2.59
SNORD42B-201ENST00000458893 SDIM1Q6ZPB5 146 aa-1.12□□□□□ -2.59
SNORD42B-201ENST00000458893 ERASQ7Z444 233 aa-1.12□□□□□ -2.59
SNORD42B-201ENST00000458893 KTN1-AS1Q86SY8 53 aa-1.12□□□□□ -2.59
SNORD42B-201ENST00000458893 LHFPL1Q86WI0 220 aa-1.12□□□□□ -2.59
SNORD42B-201ENST00000458893 BCORP1Q8N888 145 aa-1.12□□□□□ -2.59
SNORD42B-201ENST00000458893 YIPF7Q8N8F6 280 aa-1.12□□□□□ -2.59
SNORD42B-201ENST00000458893 FER1L6-AS1Q8NA97 138 aa-1.12□□□□□ -2.59
SNORD42B-201ENST00000458893 FAM71CQ8NEG0 241 aa-1.12□□□□□ -2.59
SNORD42B-201ENST00000458893 SLC30A7Q8NEW0 376 aa-1.12□□□□□ -2.59
SNORD42B-201ENST00000458893 OR2M7Q8NG81 312 aa-1.12□□□□□ -2.59
SNORD42B-201ENST00000458893 OR1M1Q8NGA1 313 aa-1.12□□□□□ -2.59
SNORD42B-201ENST00000458893 ANGPTL6Q8NI99 470 aa-1.12□□□□□ -2.59
SNORD42B-201ENST00000458893 FAM3CQ92520 227 aa-1.12□□□□□ -2.59
SNORD42B-201ENST00000458893 RDH12Q96NR8 316 aa-1.12□□□□□ -2.59
SNORD42B-201ENST00000458893 ANKRD60Q9BZ19 345 aa-1.12□□□□□ -2.59
SNORD42B-201ENST00000458893 ULBP1Q9BZM6 244 aa-1.12□□□□□ -2.59
SNORD42B-201ENST00000458893 ACTR3CQ9C0K3 210 aaPredicted RBP-1.12□□□□□ -2.59
SNORD42B-201ENST00000458893 ILKAPQ9H0C8 392 aaPredicted RBP-1.12□□□□□ -2.59
SNORD42B-201ENST00000458893 VCX3BQ9H321 246 aa-1.12□□□□□ -2.59
SNORD42B-201ENST00000458893 TMEM185BQ9H7F4 350 aa-1.12□□□□□ -2.59
SNORD42B-201ENST00000458893 NIPAL2Q9H841 368 aa-1.12□□□□□ -2.59
SNORD42B-201ENST00000458893 RGS18Q9NS28 235 aa-1.12□□□□□ -2.59
SNORD42B-201ENST00000458893 KCNIP2Q9NS61 270 aa-1.12□□□□□ -2.59
SNORD42B-201ENST00000458893 HMG20BQ9P0W2 317 aa-1.12□□□□□ -2.59
SNORD42B-201ENST00000458893 DNAJB9Q9UBS3 223 aa-1.12□□□□□ -2.59
SNORD42B-201ENST00000458893 TTLL3Q9Y4R7 772 aa-1.12□□□□□ -2.59
SNORD42B-201ENST00000458893 FLNBO75369 2602 aaKnown RBP-1.12□□□□□ -2.59
SNORD42B-201ENST00000458893 CNTNAP1P78357 1384 aa-1.12□□□□□ -2.59
SNORD42B-201ENST00000458893 PTPRJQ12913 1337 aa-1.13□□□□□ -2.59
SNORD42B-201ENST00000458893 SYNRGQ9UMZ2 1314 aa-1.13□□□□□ -2.59
SNORD42B-201ENST00000458893 SNRNP200O75643 2136 aaKnown RBP-1.13□□□□□ -2.59
SNORD42B-201ENST00000458893 OR5H14A6NHG9 310 aa-1.13□□□□□ -2.59
SNORD42B-201ENST00000458893 HMSDA8MTL9 139 aa-1.13□□□□□ -2.59
SNORD42B-201ENST00000458893 TRAPPC2LH3BP13 241 aa-1.13□□□□□ -2.59
SNORD42B-201ENST00000458893 UBFD1O14562 309 aaKnown RBP-1.13□□□□□ -2.59
SNORD42B-201ENST00000458893 TOR1AO14656 332 aa-1.13□□□□□ -2.59
SNORD42B-201ENST00000458893 ITGB1BP1O14713 200 aa-1.13□□□□□ -2.59
SNORD42B-201ENST00000458893 ZBTB5O15062 677 aa-1.13□□□□□ -2.59
SNORD42B-201ENST00000458893 CASC3O15234 703 aaKnown RBP-1.13□□□□□ -2.59
SNORD42B-201ENST00000458893 ORC5O43913 435 aa-1.13□□□□□ -2.59
SNORD42B-201ENST00000458893 FMO6PO60774 539 aa-1.13□□□□□ -2.59
SNORD42B-201ENST00000458893 MBD3O95983 291 aa-1.13□□□□□ -2.59
SNORD42B-201ENST00000458893 SERPINA7P05543 415 aa-1.13□□□□□ -2.59
SNORD42B-201ENST00000458893 ABHD2P08910 425 aa-1.13□□□□□ -2.59
SNORD42B-201ENST00000458893 TNNI3P19429 210 aa-1.13□□□□□ -2.59
SNORD42B-201ENST00000458893 NT5EP21589 574 aa-1.13□□□□□ -2.59
SNORD42B-201ENST00000458893 BMI1P35226 326 aa-1.13□□□□□ -2.59
SNORD42B-201ENST00000458893 SPRR2BP35325 72 aa-1.13□□□□□ -2.59
SNORD42B-201ENST00000458893 ZNF93P35789 620 aaPredicted RBP-1.13□□□□□ -2.59
SNORD42B-201ENST00000458893 HADHQ16836 314 aaKnown RBP-1.13□□□□□ -2.59
SNORD42B-201ENST00000458893 TMEM241Q24JQ0 296 aa-1.13□□□□□ -2.59
SNORD42B-201ENST00000458893 PPM1LQ5SGD2 360 aa-1.13□□□□□ -2.59
SNORD42B-201ENST00000458893 KDM4DQ6B0I6 523 aa-1.13□□□□□ -2.59
SNORD42B-201ENST00000458893 TMEM220Q6QAJ8 160 aa-1.13□□□□□ -2.59
SNORD42B-201ENST00000458893 KDELC1Q6UW63 502 aa-1.13□□□□□ -2.59
SNORD42B-201ENST00000458893 FAM231DQ6ZW35 169 aa-1.13□□□□□ -2.59
SNORD42B-201ENST00000458893 KIF2BQ8N4N8 673 aa-1.13□□□□□ -2.59
SNORD42B-201ENST00000458893 OR4D5Q8NGN0 318 aa-1.13□□□□□ -2.59
SNORD42B-201ENST00000458893 TCP10LQ8TDR4 215 aa-1.13□□□□□ -2.59
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms