RNA–Protein interactions for RNA: ENST00000458707.1

VPS50-208, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 1,898 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-208ENST00000458707 KCNIP3Q9Y2W7 256 aa7.44□□□□□ -1.22
VPS50-208ENST00000458707 NSG2Q9Y328 171 aa7.44□□□□□ -1.22
VPS50-208ENST00000458707 SLCO1B1Q9Y6L6 691 aa7.44□□□□□ -1.22
VPS50-208ENST00000458707 GON4LQ3T8J9 2241 aa7.43□□□□□ -1.22
VPS50-208ENST00000458707 IGKV1D-8A0A087WSZ0 117 aa7.43□□□□□ -1.22
VPS50-208ENST00000458707 A0A1W2PPH5 198 aa7.43□□□□□ -1.22
VPS50-208ENST00000458707 MKRN2OSH3BPM6 223 aa7.43□□□□□ -1.22
VPS50-208ENST00000458707 M0QZK8 103 aa7.43□□□□□ -1.22
VPS50-208ENST00000458707 AP4M1O00189 453 aa7.43□□□□□ -1.22
VPS50-208ENST00000458707 PPIHO43447 177 aaKnown RBP7.43□□□□□ -1.22
VPS50-208ENST00000458707 TRAF3IP2O43734 574 aaPredicted RBP7.43□□□□□ -1.22
VPS50-208ENST00000458707 IGHG1P01857 330 aa7.43□□□□□ -1.22
VPS50-208ENST00000458707 SNRNP70P08621 437 aaKnown RBP7.43□□□□□ -1.22
VPS50-208ENST00000458707 NME1P15531 152 aaKnown RBP7.43□□□□□ -1.22
VPS50-208ENST00000458707 ZNF14P17017 642 aaPredicted RBP7.43□□□□□ -1.22
VPS50-208ENST00000458707 ZNF43P17038 809 aa7.43□□□□□ -1.22
VPS50-208ENST00000458707 AKR1C3P42330 323 aa7.43□□□□□ -1.22
VPS50-208ENST00000458707 SULT1A1P50225 295 aa7.43□□□□□ -1.22
VPS50-208ENST00000458707 RAB2AP61019 212 aa7.43□□□□□ -1.22
VPS50-208ENST00000458707 RAB1AP62820 205 aa7.43□□□□□ -1.22
VPS50-208ENST00000458707 TNFRSF9Q07011 255 aa7.43□□□□□ -1.22
VPS50-208ENST00000458707 ZNF239Q16600 458 aaKnown RBP7.43□□□□□ -1.22
VPS50-208ENST00000458707 KRTCAP3Q53RY4 240 aa7.43□□□□□ -1.22
VPS50-208ENST00000458707 GPR157Q5UAW9 335 aa7.43□□□□□ -1.22
VPS50-208ENST00000458707 C1QL2Q7Z5L3 287 aa7.43□□□□□ -1.22
VPS50-208ENST00000458707 SULF2Q8IWU5 870 aa7.43□□□□□ -1.22
VPS50-208ENST00000458707 UEVLDQ8IX04 471 aa7.43□□□□□ -1.22
VPS50-208ENST00000458707 LRTM2Q8N967 370 aa7.43□□□□□ -1.22
VPS50-208ENST00000458707 BEND2Q8NDZ0 799 aa7.43□□□□□ -1.22
VPS50-208ENST00000458707 OR1L3Q8NH93 324 aa7.43□□□□□ -1.22
VPS50-208ENST00000458707 MAFIPQ8WZ33 124 aa7.43□□□□□ -1.22
VPS50-208ENST00000458707 ERGIC1Q969X5 290 aa7.43□□□□□ -1.22
VPS50-208ENST00000458707 MRPL24Q96A35 216 aaKnown RBP7.43□□□□□ -1.22
VPS50-208ENST00000458707 GALNT14Q96FL9 552 aa7.43□□□□□ -1.22
VPS50-208ENST00000458707 MRGPRX4Q96LA9 322 aa7.43□□□□□ -1.22
VPS50-208ENST00000458707 YPEL4Q96NS1 127 aa7.43□□□□□ -1.22
VPS50-208ENST00000458707 GGACTQ9BVM4 153 aa7.43□□□□□ -1.22
VPS50-208ENST00000458707 GAL3ST2Q9H3Q3 398 aa7.43□□□□□ -1.22
VPS50-208ENST00000458707 SMDT1Q9H4I9 107 aa7.43□□□□□ -1.22
VPS50-208ENST00000458707 POLR1DQ9Y2S0 133 aa7.43□□□□□ -1.22
VPS50-208ENST00000458707 STRAPQ9Y3F4 350 aaKnown RBP7.43□□□□□ -1.22
VPS50-208ENST00000458707 V9GYS6 101 aa7.43□□□□□ -1.22
VPS50-208ENST00000458707 ASXL3Q9C0F0 2248 aa7.43□□□□□ -1.22
VPS50-208ENST00000458707 BORCS7-ASMTA0A0B4J1R7 106 aa7.43□□□□□ -1.22
VPS50-208ENST00000458707 DHRS7CA6NNS2 312 aa7.43□□□□□ -1.22
VPS50-208ENST00000458707 RER1O15258 196 aa7.43□□□□□ -1.22
VPS50-208ENST00000458707 GPR137BO60478 399 aa7.43□□□□□ -1.22
VPS50-208ENST00000458707 CNOT4O95628 575 aaKnown RBP7.43□□□□□ -1.22
VPS50-208ENST00000458707 MBPP02686 304 aaPredicted RBP7.43□□□□□ -1.22
VPS50-208ENST00000458707 FBXW4P57775 412 aa7.43□□□□□ -1.22
VPS50-208ENST00000458707 PKIAP61925 76 aa7.43□□□□□ -1.22
VPS50-208ENST00000458707 SLC35A1P78382 337 aa7.43□□□□□ -1.22
VPS50-208ENST00000458707 MYBPHQ13203 477 aa7.43□□□□□ -1.22
VPS50-208ENST00000458707 MFAP5Q13361 173 aa7.43□□□□□ -1.22
VPS50-208ENST00000458707 AKIRIN2Q53H80 203 aa7.43□□□□□ -1.22
VPS50-208ENST00000458707 C1orf185Q5T7R7 199 aa7.43□□□□□ -1.22
VPS50-208ENST00000458707 LANCL3Q6ZV70 420 aa7.43□□□□□ -1.22
VPS50-208ENST00000458707 HIST2H3AQ71DI3 136 aa7.43□□□□□ -1.22
VPS50-208ENST00000458707 FAM57BQ71RH2 274 aa7.43□□□□□ -1.22
VPS50-208ENST00000458707 LFNGQ8NES3 379 aa7.43□□□□□ -1.22
VPS50-208ENST00000458707 HPSE2Q8WWQ2 592 aa7.43□□□□□ -1.22
VPS50-208ENST00000458707 ISOC2Q96AB3 205 aa7.43□□□□□ -1.22
VPS50-208ENST00000458707 LYZL4Q96KX0 146 aa7.43□□□□□ -1.22
VPS50-208ENST00000458707 GNRHR2Q96P88 292 aa7.43□□□□□ -1.22
VPS50-208ENST00000458707 MESP1Q9BRJ9 268 aa7.43□□□□□ -1.22
VPS50-208ENST00000458707 NUDT22Q9BRQ3 303 aa7.43□□□□□ -1.22
VPS50-208ENST00000458707 ZNF2Q9BSG1 426 aaPredicted RBP7.43□□□□□ -1.22
VPS50-208ENST00000458707 SLC35B3Q9H1N7 401 aa7.43□□□□□ -1.22
VPS50-208ENST00000458707 MCTS1Q9ULC4 181 aaKnown RBP7.43□□□□□ -1.22
VPS50-208ENST00000458707 PADI1Q9ULC6 663 aa7.43□□□□□ -1.22
VPS50-208ENST00000458707 VDAC3Q9Y277 283 aa7.43□□□□□ -1.22
VPS50-208ENST00000458707 LSM5Q9Y4Y9 91 aaKnown RBP7.43□□□□□ -1.22
VPS50-208ENST00000458707 RTTNQ86VV8 2226 aa7.42□□□□□ -1.22
VPS50-208ENST00000458707 IGLV3-32A0A0A0MS00 114 aa7.42□□□□□ -1.22
VPS50-208ENST00000458707 hCG_1809904A0A1W2PP81 198 aa7.42□□□□□ -1.22
VPS50-208ENST00000458707 A0A1W2PR64 198 aa7.42□□□□□ -1.22
VPS50-208ENST00000458707 A0A1W2PRV1 198 aa7.42□□□□□ -1.22
VPS50-208ENST00000458707 UMAD1C9J7I0 102 aa7.42□□□□□ -1.22
VPS50-208ENST00000458707 E9PLN8 166 aa7.42□□□□□ -1.22
VPS50-208ENST00000458707 H3BML4 177 aa7.42□□□□□ -1.22
VPS50-208ENST00000458707 M0R036 132 aa7.42□□□□□ -1.22
VPS50-208ENST00000458707 NME2P1O60361 137 aa7.42□□□□□ -1.22
VPS50-208ENST00000458707 HIST1H1BP16401 226 aaKnown RBP7.42□□□□□ -1.22
VPS50-208ENST00000458707 DDTP30046 118 aa7.42□□□□□ -1.22
VPS50-208ENST00000458707 CDAP32320 146 aa7.42□□□□□ -1.22
VPS50-208ENST00000458707 ZNF133P52736 654 aaPredicted RBP7.42□□□□□ -1.22
VPS50-208ENST00000458707 MRPS11P82912 194 aaKnown RBP7.42□□□□□ -1.22
VPS50-208ENST00000458707 HYAL1Q12794 435 aa7.42□□□□□ -1.22
VPS50-208ENST00000458707 TMEM187Q14656 261 aa7.42□□□□□ -1.22
VPS50-208ENST00000458707 PLPPR5Q32ZL2 321 aa7.42□□□□□ -1.22
VPS50-208ENST00000458707 RPUSD3Q6P087 351 aaKnown RBP7.42□□□□□ -1.22
VPS50-208ENST00000458707 SPNS3Q6ZMD2 512 aa7.42□□□□□ -1.22
VPS50-208ENST00000458707 PRSS58Q8IYP2 241 aa7.42□□□□□ -1.22
VPS50-208ENST00000458707 TMEM156Q8N614 296 aa7.42□□□□□ -1.22
VPS50-208ENST00000458707 ZNF283Q8N7M2 679 aa7.42□□□□□ -1.22
VPS50-208ENST00000458707 APCDD1LQ8NCL9 501 aa7.42□□□□□ -1.22
VPS50-208ENST00000458707 PP6455Q8WZ26 134 aa7.42□□□□□ -1.22
VPS50-208ENST00000458707 HAS2Q92819 552 aa7.42□□□□□ -1.22
VPS50-208ENST00000458707 C10orf35Q96D05 121 aa7.42□□□□□ -1.22
VPS50-208ENST00000458707 BSCL2Q96G97 398 aaPredicted RBP7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms