RNA–Protein interactions for RNA: ENST00000456560.6

SEMA3B-209, Transcript of semaphorin 3B, humanhuman

TSL 1 (best) BASIC

Gene SEMA3B, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-209ENST00000456560 CBLN2Q8IUK8 224 aa15.94■□□□□ 0.14
SEMA3B-209ENST00000456560 FOXJ2Q9P0K8 574 aa15.94■□□□□ 0.14
SEMA3B-209ENST00000456560 ZNF629Q9UEG4 869 aaPredicted RBP15.94■□□□□ 0.14
SEMA3B-209ENST00000456560 AK3Q9UIJ7 227 aa15.94■□□□□ 0.14
SEMA3B-209ENST00000456560 ANXA10Q9UJ72 324 aa15.94■□□□□ 0.14
SEMA3B-209ENST00000456560 A0A1W2PNU3 283 aaPredicted RBP15.93■□□□□ 0.14
SEMA3B-209ENST00000456560 LNP1A1A4G5 178 aa15.93■□□□□ 0.14
SEMA3B-209ENST00000456560 ZNF98A6NK75 572 aa15.93■□□□□ 0.14
SEMA3B-209ENST00000456560 F8W036 122 aa15.93■□□□□ 0.14
SEMA3B-209ENST00000456560 NEURL1O76050 574 aa15.93■□□□□ 0.14
SEMA3B-209ENST00000456560 JMJD7P0C870 316 aa15.93■□□□□ 0.14
SEMA3B-209ENST00000456560 CHATP28329 748 aa15.93■□□□□ 0.14
SEMA3B-209ENST00000456560 HOXA1P49639 335 aaPredicted RBP15.93■□□□□ 0.14
SEMA3B-209ENST00000456560 BLOC1S1P78537 153 aa15.93■□□□□ 0.14
SEMA3B-209ENST00000456560 OR8B8Q15620 311 aa15.93■□□□□ 0.14
SEMA3B-209ENST00000456560 NRN1LQ496H8 165 aa15.93■□□□□ 0.14
SEMA3B-209ENST00000456560 BHLHE23Q8NDY6 225 aa15.93■□□□□ 0.14
SEMA3B-209ENST00000456560 OR2M7Q8NG81 312 aa15.93■□□□□ 0.14
SEMA3B-209ENST00000456560 MICU1Q9BPX6 476 aa15.93■□□□□ 0.14
SEMA3B-209ENST00000456560 FAM173AQ9BQD7 235 aa15.93■□□□□ 0.14
SEMA3B-209ENST00000456560 ZNF2Q9BSG1 426 aaPredicted RBP15.93■□□□□ 0.14
SEMA3B-209ENST00000456560 CYTL1Q9NRR1 136 aa15.93■□□□□ 0.14
SEMA3B-209ENST00000456560 IL36GQ9NZH8 169 aa15.93■□□□□ 0.14
SEMA3B-209ENST00000456560 C14orf166Q9Y224 244 aaKnown RBP15.93■□□□□ 0.14
SEMA3B-209ENST00000456560 TPT1P13693 172 aaKnown RBP15.92■□□□□ 0.14
SEMA3B-209ENST00000456560 DTYMKP23919 212 aa15.92■□□□□ 0.14
SEMA3B-209ENST00000456560 TSPO2Q5TGU0 170 aa15.92■□□□□ 0.14
SEMA3B-209ENST00000456560 WNT2BQ93097 391 aa15.92■□□□□ 0.14
SEMA3B-209ENST00000456560 ARL11Q969Q4 196 aa15.92■□□□□ 0.14
SEMA3B-209ENST00000456560 SPSB4Q96A44 273 aa15.92■□□□□ 0.14
SEMA3B-209ENST00000456560 METTL8Q9H825 291 aaKnown RBP15.92■□□□□ 0.14
SEMA3B-209ENST00000456560 CFAP54Q96N23 3096 aa15.92■□□□□ 0.14
SEMA3B-209ENST00000456560 ACTL6AO96019 429 aa15.92■□□□□ 0.14
SEMA3B-209ENST00000456560 CTSDP07339 412 aaPredicted RBP15.92■□□□□ 0.14
SEMA3B-209ENST00000456560 EDN3P14138 238 aa15.92■□□□□ 0.14
SEMA3B-209ENST00000456560 FUT6P51993 359 aa15.92■□□□□ 0.14
SEMA3B-209ENST00000456560 NAAAQ02083 359 aa15.92■□□□□ 0.14
SEMA3B-209ENST00000456560 PLEKHN1Q494U1 663 aaPredicted RBP15.92■□□□□ 0.14
SEMA3B-209ENST00000456560 SPAG16Q8N0X2 631 aa15.92■□□□□ 0.14
SEMA3B-209ENST00000456560 SIGLEC12Q96PQ1 595 aa15.92■□□□□ 0.14
SEMA3B-209ENST00000456560 SULT4A1Q9BR01 284 aa15.92■□□□□ 0.14
SEMA3B-209ENST00000456560 C1QTNF5Q9BXJ0 243 aa15.92■□□□□ 0.14
SEMA3B-209ENST00000456560 ZNF703Q9H7S9 590 aaPredicted RBP15.92■□□□□ 0.14
SEMA3B-209ENST00000456560 OR5AC2Q9NZP5 309 aa15.92■□□□□ 0.14
SEMA3B-209ENST00000456560 KNG1P01042 644 aa15.91■□□□□ 0.14
SEMA3B-209ENST00000456560 LHX2P50458 406 aa15.91■□□□□ 0.14
SEMA3B-209ENST00000456560 PDZK1IP1Q13113 114 aa15.91■□□□□ 0.14
SEMA3B-209ENST00000456560 CPEB3Q8NE35 698 aaKnown RBP15.91■□□□□ 0.14
SEMA3B-209ENST00000456560 LINC00470Q9BZP3 86 aa15.91■□□□□ 0.14
SEMA3B-209ENST00000456560 LIME1Q9H400 295 aa15.91■□□□□ 0.14
SEMA3B-209ENST00000456560 NOSIPQ9Y314 301 aaKnown RBP15.91■□□□□ 0.14
SEMA3B-209ENST00000456560 XRCC2O43543 280 aa15.91■□□□□ 0.14
SEMA3B-209ENST00000456560 IFNA2P01563 188 aa15.91■□□□□ 0.14
SEMA3B-209ENST00000456560 CELA3AP09093 270 aa15.91■□□□□ 0.14
SEMA3B-209ENST00000456560 RRADP55042 308 aa15.91■□□□□ 0.14
SEMA3B-209ENST00000456560 SRSF3P84103 164 aaKnown RBP15.91■□□□□ 0.14
SEMA3B-209ENST00000456560 AIMP2Q13155 320 aaKnown RBP15.91■□□□□ 0.14
SEMA3B-209ENST00000456560 COLCA1Q6ZS62 124 aa15.91■□□□□ 0.14
SEMA3B-209ENST00000456560 BAP18Q8IXM2 172 aa15.91■□□□□ 0.14
SEMA3B-209ENST00000456560 SLC30A7Q8NEW0 376 aa15.91■□□□□ 0.14
SEMA3B-209ENST00000456560 CNTNAP3BQ96NU0 1288 aa15.91■□□□□ 0.14
SEMA3B-209ENST00000456560 CMSS1Q9BQ75 279 aaKnown RBP15.91■□□□□ 0.14
SEMA3B-209ENST00000456560 PRDM14Q9GZV8 571 aa15.91■□□□□ 0.14
SEMA3B-209ENST00000456560 FAM86C1Q9NVL1 165 aa15.91■□□□□ 0.14
SEMA3B-209ENST00000456560 ZNF816-ZNF321PA0A0X1KG74 233 aa15.9■□□□□ 0.14
SEMA3B-209ENST00000456560 MSGN1A6NI15 193 aa15.9■□□□□ 0.14
SEMA3B-209ENST00000456560 ZNF587BE7ETH6 402 aa15.9■□□□□ 0.14
SEMA3B-209ENST00000456560 GEMIN2O14893 280 aaKnown RBP15.9■□□□□ 0.14
SEMA3B-209ENST00000456560 FARS2O95363 451 aaKnown RBP15.9■□□□□ 0.14
SEMA3B-209ENST00000456560 FCGR3AP08637 254 aa15.9■□□□□ 0.14
SEMA3B-209ENST00000456560 OR5H8P0DN80 308 aa15.9■□□□□ 0.14
SEMA3B-209ENST00000456560 CD79AP11912 226 aa15.9■□□□□ 0.14
SEMA3B-209ENST00000456560 CLDN18P56856 261 aa15.9■□□□□ 0.14
SEMA3B-209ENST00000456560 CDCP2Q5VXM1 449 aa15.9■□□□□ 0.14
SEMA3B-209ENST00000456560 DHRS11Q6UWP2 260 aa15.9■□□□□ 0.14
SEMA3B-209ENST00000456560 OSR2Q8N2R0 312 aa15.9■□□□□ 0.14
SEMA3B-209ENST00000456560 RNF141Q8WVD5 230 aa15.9■□□□□ 0.14
SEMA3B-209ENST00000456560 AQP10Q96PS8 301 aa15.9■□□□□ 0.14
SEMA3B-209ENST00000456560 GPR87Q9BY21 358 aa15.9■□□□□ 0.14
SEMA3B-209ENST00000456560 BCO1Q9HAY6 547 aa15.9■□□□□ 0.14
SEMA3B-209ENST00000456560 TREM1Q9NP99 234 aa15.9■□□□□ 0.14
SEMA3B-209ENST00000456560 ATPIF1Q9UII2 106 aa15.9■□□□□ 0.14
SEMA3B-209ENST00000456560 SLC7A11Q9UPY5 501 aa15.9■□□□□ 0.14
SEMA3B-209ENST00000456560 MRPL33O75394 65 aaKnown RBP15.9■□□□□ 0.14
SEMA3B-209ENST00000456560 IGHV3-9P01782 118 aa15.9■□□□□ 0.14
SEMA3B-209ENST00000456560 RFC3P40938 356 aa15.9■□□□□ 0.14
SEMA3B-209ENST00000456560 RAB13P51153 203 aa15.9■□□□□ 0.14
SEMA3B-209ENST00000456560 ARF1P84077 181 aaKnown RBP15.9■□□□□ 0.14
SEMA3B-209ENST00000456560 RAB32Q13637 225 aa15.9■□□□□ 0.14
SEMA3B-209ENST00000456560 RBM39Q14498 530 aaKnown RBP15.9■□□□□ 0.14
SEMA3B-209ENST00000456560 PIGYQ3MUY2 71 aa15.9■□□□□ 0.14
SEMA3B-209ENST00000456560 PLA2G2CQ5R387 149 aa15.9■□□□□ 0.14
SEMA3B-209ENST00000456560 DHRS7BQ6IAN0 325 aaPredicted RBP15.9■□□□□ 0.14
SEMA3B-209ENST00000456560 OR10AD1Q8NGE0 317 aa15.9■□□□□ 0.14
SEMA3B-209ENST00000456560 PIGCQ92535 297 aa15.9■□□□□ 0.14
SEMA3B-209ENST00000456560 TECTBQ96PL2 329 aa15.9■□□□□ 0.14
SEMA3B-209ENST00000456560 HES7Q9BYE0 225 aa15.9■□□□□ 0.14
SEMA3B-209ENST00000456560 TLNRD1Q9H1K6 362 aa15.9■□□□□ 0.14
SEMA3B-209ENST00000456560 SLC7A10Q9NS82 523 aa15.9■□□□□ 0.14
SEMA3B-209ENST00000456560 TMEM100Q9NV29 134 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms