RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 RFPL4AL1F8VTS6 287 aa11.7□□□□□ -0.54
HDAC4-205ENST00000454542 GPX5O75715 221 aa11.7□□□□□ -0.54
HDAC4-205ENST00000454542 KDM4BO94953 1096 aa11.7□□□□□ -0.54
HDAC4-205ENST00000454542 PLATP00750 562 aa11.7□□□□□ -0.54
HDAC4-205ENST00000454542 IGKV1D-12P01611 117 aa11.7□□□□□ -0.54
HDAC4-205ENST00000454542 CD2P06729 351 aa11.7□□□□□ -0.54
HDAC4-205ENST00000454542 OCM2P0CE71 109 aa11.7□□□□□ -0.54
HDAC4-205ENST00000454542 IGFBP3P17936 291 aaPredicted RBP11.7□□□□□ -0.54
HDAC4-205ENST00000454542 SOX2P48431 317 aa11.7□□□□□ -0.54
HDAC4-205ENST00000454542 POU3F4P49335 361 aa11.7□□□□□ -0.54
HDAC4-205ENST00000454542 MTCP1P56278 107 aa11.7□□□□□ -0.54
HDAC4-205ENST00000454542 FGF12P61328 243 aa11.7□□□□□ -0.54
HDAC4-205ENST00000454542 IKZF1Q13422 519 aa11.7□□□□□ -0.54
HDAC4-205ENST00000454542 Q499Y3 187 aa11.7□□□□□ -0.54
HDAC4-205ENST00000454542 ARMCX4Q5H9R4 360 aa11.7□□□□□ -0.54
HDAC4-205ENST00000454542 C9orf139Q6ZV77 190 aa11.7□□□□□ -0.54
HDAC4-205ENST00000454542 SAXO1Q8IYX7 474 aa11.7□□□□□ -0.54
HDAC4-205ENST00000454542 ZNF561Q8N587 486 aa11.7□□□□□ -0.54
HDAC4-205ENST00000454542 KIR3DL3Q8N743 410 aa11.7□□□□□ -0.54
HDAC4-205ENST00000454542 PNLDC1Q8NA58 520 aaKnown RBP11.7□□□□□ -0.54
HDAC4-205ENST00000454542 SPACA5Q96QH8 159 aa11.7□□□□□ -0.54
HDAC4-205ENST00000454542 TBX15Q96SF7 602 aa11.7□□□□□ -0.54
HDAC4-205ENST00000454542 ZNF184Q99676 751 aaPredicted RBP11.7□□□□□ -0.54
HDAC4-205ENST00000454542 NEK6Q9HC98 313 aa11.7□□□□□ -0.54
HDAC4-205ENST00000454542 TAS2R4Q9NYW5 299 aa11.7□□□□□ -0.54
HDAC4-205ENST00000454542 TPRKBQ9Y3C4 175 aa11.7□□□□□ -0.54
HDAC4-205ENST00000454542 DNHD1Q96M86 4753 aa11.7□□□□□ -0.54
HDAC4-205ENST00000454542 TRBV23-1A0A0A0MS06 115 aa11.69□□□□□ -0.54
HDAC4-205ENST00000454542 ZNF737O75373 536 aa11.69□□□□□ -0.54
HDAC4-205ENST00000454542 ALDOBP05062 364 aa11.69□□□□□ -0.54
HDAC4-205ENST00000454542 RAB3AP20336 220 aa11.69□□□□□ -0.54
HDAC4-205ENST00000454542 PRDX2P32119 198 aa11.69□□□□□ -0.54
HDAC4-205ENST00000454542 NPBWR2P48146 333 aa11.69□□□□□ -0.54
HDAC4-205ENST00000454542 CEBPDP49716 269 aaPredicted RBP11.69□□□□□ -0.54
HDAC4-205ENST00000454542 KISS1Q15726 138 aa11.69□□□□□ -0.54
HDAC4-205ENST00000454542 RBM48Q5RL73 367 aaKnown RBP11.69□□□□□ -0.54
HDAC4-205ENST00000454542 PRSS48Q7RTY5 328 aa11.69□□□□□ -0.54
HDAC4-205ENST00000454542 MKXQ8IYA7 352 aa11.69□□□□□ -0.54
HDAC4-205ENST00000454542 BATF2Q8N1L9 274 aa11.69□□□□□ -0.54
HDAC4-205ENST00000454542 ZSCAN4Q8NAM6 433 aaPredicted RBP11.69□□□□□ -0.54
HDAC4-205ENST00000454542 ZNRF1Q8ND25 227 aa11.69□□□□□ -0.54
HDAC4-205ENST00000454542 RFT1Q96AA3 541 aa11.69□□□□□ -0.54
HDAC4-205ENST00000454542 CNBD2Q96M20 576 aa11.69□□□□□ -0.54
HDAC4-205ENST00000454542 OR5M11Q96RB7 305 aa11.69□□□□□ -0.54
HDAC4-205ENST00000454542 FAM234AQ9H0X4 552 aa11.69□□□□□ -0.54
HDAC4-205ENST00000454542 RHOFQ9HBH0 211 aa11.69□□□□□ -0.54
HDAC4-205ENST00000454542 RBFOX1Q9NWB1 397 aaKnown RBP11.69□□□□□ -0.54
HDAC4-205ENST00000454542 IL36RNQ9UBH0 155 aa11.69□□□□□ -0.54
HDAC4-205ENST00000454542 NUP50Q9UKX7 468 aa11.69□□□□□ -0.54
HDAC4-205ENST00000454542 KPTNQ9Y664 436 aa11.69□□□□□ -0.54
HDAC4-205ENST00000454542 ATRQ13535 2644 aa11.69□□□□□ -0.54
HDAC4-205ENST00000454542 FBN1P35555 2871 aaKnown RBP11.69□□□□□ -0.54
HDAC4-205ENST00000454542 TRAV40A0A0B4J280 105 aa11.68□□□□□ -0.54
HDAC4-205ENST00000454542 PTGES3LE9PB15 166 aa11.68□□□□□ -0.54
HDAC4-205ENST00000454542 SPRY1O43609 319 aaPredicted RBP11.68□□□□□ -0.54
HDAC4-205ENST00000454542 RGS10O43665 173 aa11.68□□□□□ -0.54
HDAC4-205ENST00000454542 HCKP08631 526 aa11.68□□□□□ -0.54
HDAC4-205ENST00000454542 IGHV4-38-2P0DP08 117 aa11.68□□□□□ -0.54
HDAC4-205ENST00000454542 CELP19835 753 aa11.68□□□□□ -0.54
HDAC4-205ENST00000454542 BCL3P20749 454 aa11.68□□□□□ -0.54
HDAC4-205ENST00000454542 GABRA2P47869 451 aa11.68□□□□□ -0.54
HDAC4-205ENST00000454542 ZNF146Q15072 292 aa11.68□□□□□ -0.54
HDAC4-205ENST00000454542 SPIN3Q5JUX0 258 aa11.68□□□□□ -0.54
HDAC4-205ENST00000454542 USP43Q70EL4 1123 aa11.68□□□□□ -0.54
HDAC4-205ENST00000454542 TMEM185AQ8NFB2 350 aa11.68□□□□□ -0.54
HDAC4-205ENST00000454542 PXT1Q8NFP0 134 aa11.68□□□□□ -0.54
HDAC4-205ENST00000454542 EMG1Q92979 244 aaKnown RBP11.68□□□□□ -0.54
HDAC4-205ENST00000454542 CPNE2Q96FN4 548 aaPredicted RBP11.68□□□□□ -0.54
HDAC4-205ENST00000454542 WDFY2Q96P53 400 aa11.68□□□□□ -0.54
HDAC4-205ENST00000454542 DERL3Q96Q80 235 aa11.68□□□□□ -0.54
HDAC4-205ENST00000454542 ELL3Q9HB65 397 aaPredicted RBP11.68□□□□□ -0.54
HDAC4-205ENST00000454542 HMG20AQ9NP66 347 aa11.68□□□□□ -0.54
HDAC4-205ENST00000454542 A0A0A6YYJ9 748 aa11.67□□□□□ -0.54
HDAC4-205ENST00000454542 GABRPO00591 440 aa11.67□□□□□ -0.54
HDAC4-205ENST00000454542 DENRO43583 198 aaKnown RBP11.67□□□□□ -0.54
HDAC4-205ENST00000454542 ANGPTL7O43827 346 aa11.67□□□□□ -0.54
HDAC4-205ENST00000454542 SC5DO75845 299 aa11.67□□□□□ -0.54
HDAC4-205ENST00000454542 CYB5AP00167 134 aa11.67□□□□□ -0.54
HDAC4-205ENST00000454542 SFTPBP07988 381 aa11.67□□□□□ -0.54
HDAC4-205ENST00000454542 OCMP0CE72 109 aaPredicted RBP11.67□□□□□ -0.54
HDAC4-205ENST00000454542 GABARAPL2P60520 117 aa11.67□□□□□ -0.54
HDAC4-205ENST00000454542 SPHARQ15513 63 aa11.67□□□□□ -0.54
HDAC4-205ENST00000454542 TBCEQ15813 527 aaPredicted RBP11.67□□□□□ -0.54
HDAC4-205ENST00000454542 ASCL4Q6XD76 172 aa11.67□□□□□ -0.54
HDAC4-205ENST00000454542 FAM58AQ8N1B3 248 aa11.67□□□□□ -0.54
HDAC4-205ENST00000454542 Q8NFD4 153 aa11.67□□□□□ -0.54
HDAC4-205ENST00000454542 OR52N4Q8NGI2 321 aa11.67□□□□□ -0.54
HDAC4-205ENST00000454542 OR5D18Q8NGL1 313 aa11.67□□□□□ -0.54
HDAC4-205ENST00000454542 THRSPQ92748 146 aa11.67□□□□□ -0.54
HDAC4-205ENST00000454542 OR14A2Q96R54 314 aa11.67□□□□□ -0.54
HDAC4-205ENST00000454542 SLC6A7Q99884 636 aa11.67□□□□□ -0.54
HDAC4-205ENST00000454542 CNTD2Q9H8S5 307 aa11.67□□□□□ -0.54
HDAC4-205ENST00000454542 UNKLQ9H9P5 680 aaKnown RBP11.67□□□□□ -0.54
HDAC4-205ENST00000454542 ISYNA1Q9NPH2 558 aa11.67□□□□□ -0.54
HDAC4-205ENST00000454542 ZNF69Q9UC07 566 aa11.67□□□□□ -0.54
HDAC4-205ENST00000454542 OR14J1Q9UGF5 321 aa11.67□□□□□ -0.54
HDAC4-205ENST00000454542 BLOC1S6Q9UL45 172 aa11.67□□□□□ -0.54
HDAC4-205ENST00000454542 DSCAML1Q8TD84 2053 aa11.67□□□□□ -0.54
HDAC4-205ENST00000454542 TRAV8-7A0A075B6U6 113 aa11.66□□□□□ -0.54
HDAC4-205ENST00000454542 PNMA8CA0A1B0GUJ8 204 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms