RNA–Protein interactions for RNA: ENST00000453310.5

RBM39-219, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 1,068 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-219ENST00000453310 DUX4L2P0CJ85 424 aa13.06□□□□□ -0.32
RBM39-219ENST00000453310 DUX4L3P0CJ86 424 aa13.06□□□□□ -0.32
RBM39-219ENST00000453310 DUX4L4P0CJ87 422 aa13.06□□□□□ -0.32
RBM39-219ENST00000453310 DUX4L5P0CJ88 424 aa13.06□□□□□ -0.32
RBM39-219ENST00000453310 DUX4L6P0CJ89 424 aa13.06□□□□□ -0.32
RBM39-219ENST00000453310 DUX4L7P0CJ90 424 aa13.06□□□□□ -0.32
RBM39-219ENST00000453310 ZNF16P17020 682 aaPredicted RBP13.06□□□□□ -0.32
RBM39-219ENST00000453310 AMY2BP19961 511 aa13.06□□□□□ -0.32
RBM39-219ENST00000453310 GADD45AP24522 165 aa13.06□□□□□ -0.32
RBM39-219ENST00000453310 GABRA2P47869 451 aa13.06□□□□□ -0.32
RBM39-219ENST00000453310 PITPNBP48739 271 aa13.06□□□□□ -0.32
RBM39-219ENST00000453310 ESCO2Q56NI9 601 aa13.06□□□□□ -0.32
RBM39-219ENST00000453310 ATPAF1Q5TC12 328 aaPredicted RBP13.06□□□□□ -0.32
RBM39-219ENST00000453310 CYB5R2Q6BCY4 276 aa13.06□□□□□ -0.32
RBM39-219ENST00000453310 C22orf42Q6IC83 251 aa13.06□□□□□ -0.32
RBM39-219ENST00000453310 DUX4L9Q6RFH8 374 aaPredicted RBP13.06□□□□□ -0.32
RBM39-219ENST00000453310 SLC36A1Q7Z2H8 476 aa13.06□□□□□ -0.32
RBM39-219ENST00000453310 BIVMQ86UB2 503 aa13.06□□□□□ -0.32
RBM39-219ENST00000453310 LYPD6Q86Y78 171 aa13.06□□□□□ -0.32
RBM39-219ENST00000453310 FAM58AQ8N1B3 248 aa13.06□□□□□ -0.32
RBM39-219ENST00000453310 UQCC2Q9BRT2 126 aa13.06□□□□□ -0.32
RBM39-219ENST00000453310 SSBP3Q9BWW4 388 aaPredicted RBP13.06□□□□□ -0.32
RBM39-219ENST00000453310 DNTTIP1Q9H147 329 aa13.06□□□□□ -0.32
RBM39-219ENST00000453310 OR51E2Q9H255 320 aa13.06□□□□□ -0.32
RBM39-219ENST00000453310 CNTD2Q9H8S5 307 aa13.06□□□□□ -0.32
RBM39-219ENST00000453310 ELL3Q9HB65 397 aaPredicted RBP13.06□□□□□ -0.32
RBM39-219ENST00000453310 RHOFQ9HBH0 211 aa13.06□□□□□ -0.32
RBM39-219ENST00000453310 LPAR2Q9HBW0 351 aa13.06□□□□□ -0.32
RBM39-219ENST00000453310 TXNL4BQ9NX01 149 aaKnown RBP13.06□□□□□ -0.32
RBM39-219ENST00000453310 IL36RNQ9UBH0 155 aa13.06□□□□□ -0.32
RBM39-219ENST00000453310 KAAG1Q9UBP8 84 aa13.06□□□□□ -0.32
RBM39-219ENST00000453310 DUX4Q9UBX2 424 aa13.06□□□□□ -0.32
RBM39-219ENST00000453310 ZNF222Q9UK12 451 aa13.06□□□□□ -0.32
RBM39-219ENST00000453310 SSR3Q9UNL2 185 aa13.06□□□□□ -0.32
RBM39-219ENST00000453310 CSPG4Q6UVK1 2322 aa13.06□□□□□ -0.32
RBM39-219ENST00000453310 CD5LO43866 347 aa13.05□□□□□ -0.32
RBM39-219ENST00000453310 FOXH1O75593 365 aa13.05□□□□□ -0.32
RBM39-219ENST00000453310 CDRT1O95170 752 aa13.05□□□□□ -0.32
RBM39-219ENST00000453310 MSMBP08118 114 aa13.05□□□□□ -0.32
RBM39-219ENST00000453310 CALCBP10092 127 aa13.05□□□□□ -0.32
RBM39-219ENST00000453310 PRKACAP17612 351 aa13.05□□□□□ -0.32
RBM39-219ENST00000453310 MYL9P24844 172 aa13.05□□□□□ -0.32
RBM39-219ENST00000453310 FGF9P31371 208 aaPredicted RBP13.05□□□□□ -0.32
RBM39-219ENST00000453310 GNB2P62879 340 aa13.05□□□□□ -0.32
RBM39-219ENST00000453310 GLT8D1Q68CQ7 371 aa13.05□□□□□ -0.32
RBM39-219ENST00000453310 FIP1L1Q6UN15 594 aaKnown RBP13.05□□□□□ -0.32
RBM39-219ENST00000453310 ASCL4Q6XD76 172 aa13.05□□□□□ -0.32
RBM39-219ENST00000453310 ZNF841Q6ZN19 808 aa13.05□□□□□ -0.32
RBM39-219ENST00000453310 ZNF788Q6ZQV5 615 aa13.05□□□□□ -0.32
RBM39-219ENST00000453310 FAM216BQ8N7L0 139 aa13.05□□□□□ -0.32
RBM39-219ENST00000453310 OR4D6Q8NGJ1 314 aa13.05□□□□□ -0.32
RBM39-219ENST00000453310 FOXRED1Q96CU9 486 aaPredicted RBP13.05□□□□□ -0.32
RBM39-219ENST00000453310 YIPF6Q96EC8 236 aa13.05□□□□□ -0.32
RBM39-219ENST00000453310 GAFA1Q96PS6 74 aa13.05□□□□□ -0.32
RBM39-219ENST00000453310 CHCHD6Q9BRQ6 235 aa13.05□□□□□ -0.32
RBM39-219ENST00000453310 HMG20AQ9NP66 347 aa13.05□□□□□ -0.32
RBM39-219ENST00000453310 OR14J1Q9UGF5 321 aa13.05□□□□□ -0.32
RBM39-219ENST00000453310 ING4Q9UNL4 249 aa13.05□□□□□ -0.32
RBM39-219ENST00000453310 MRPS28Q9Y2Q9 187 aaKnown RBP13.05□□□□□ -0.32
RBM39-219ENST00000453310 TRAV1-2A0A0B4J238 106 aa13.04□□□□□ -0.32
RBM39-219ENST00000453310 SHISA3A0PJX4 238 aa13.04□□□□□ -0.32
RBM39-219ENST00000453310 KIAA1324LA8MWY0 1029 aaPredicted RBP13.04□□□□□ -0.32
RBM39-219ENST00000453310 A8MXK9 166 aa13.04□□□□□ -0.32
RBM39-219ENST00000453310 SIGLEC5O15389 551 aa13.04□□□□□ -0.32
RBM39-219ENST00000453310 PHF1O43189 567 aaPredicted RBP13.04□□□□□ -0.32
RBM39-219ENST00000453310 LY6G6DO95868 133 aa13.04□□□□□ -0.32
RBM39-219ENST00000453310 SELLP14151 372 aa13.04□□□□□ -0.32
RBM39-219ENST00000453310 ZFP36P26651 326 aaKnown RBP13.04□□□□□ -0.32
RBM39-219ENST00000453310 PRDX2P32119 198 aa13.04□□□□□ -0.32
RBM39-219ENST00000453310 MTNR1BP49286 362 aa13.04□□□□□ -0.32
RBM39-219ENST00000453310 CEBPDP49716 269 aaPredicted RBP13.04□□□□□ -0.32
RBM39-219ENST00000453310 NPY4RP50391 375 aa13.04□□□□□ -0.32
RBM39-219ENST00000453310 BMXP51813 675 aa13.04□□□□□ -0.32
RBM39-219ENST00000453310 SNU13P55769 128 aaKnown RBP13.04□□□□□ -0.32
RBM39-219ENST00000453310 FGF12P61328 243 aa13.04□□□□□ -0.32
RBM39-219ENST00000453310 IL13RA1P78552 427 aa13.04□□□□□ -0.32
RBM39-219ENST00000453310 LCN2P80188 198 aa13.04□□□□□ -0.32
RBM39-219ENST00000453310 RSU1Q15404 277 aa13.04□□□□□ -0.32
RBM39-219ENST00000453310 WDR25Q64LD2 544 aaPredicted RBP13.04□□□□□ -0.32
RBM39-219ENST00000453310 AWAT2Q6E213 333 aa13.04□□□□□ -0.32
RBM39-219ENST00000453310 CLEC9AQ6UXN8 241 aa13.04□□□□□ -0.32
RBM39-219ENST00000453310 CD177Q8N6Q3 437 aa13.04□□□□□ -0.32
RBM39-219ENST00000453310 OR10K1Q8NGX5 313 aa13.04□□□□□ -0.32
RBM39-219ENST00000453310 SDSLQ96GA7 329 aa13.04□□□□□ -0.32
RBM39-219ENST00000453310 S100A13Q99584 98 aa13.04□□□□□ -0.32
RBM39-219ENST00000453310 GFI1Q99684 422 aa13.04□□□□□ -0.32
RBM39-219ENST00000453310 METTL9Q9H1A3 318 aa13.04□□□□□ -0.32
RBM39-219ENST00000453310 GSX1Q9H4S2 264 aaPredicted RBP13.04□□□□□ -0.32
RBM39-219ENST00000453310 IL36GQ9NZH8 169 aa13.04□□□□□ -0.32
RBM39-219ENST00000453310 CLN8Q9UBY8 286 aa13.04□□□□□ -0.32
RBM39-219ENST00000453310 GSTK1Q9Y2Q3 226 aa13.04□□□□□ -0.32
RBM39-219ENST00000453310 AK6Q9Y3D8 172 aaKnown RBP13.04□□□□□ -0.32
RBM39-219ENST00000453310 MALRD1Q5VYJ5 2156 aa13.04□□□□□ -0.32
RBM39-219ENST00000453310 ANK3Q12955 4377 aaKnown RBP13.03□□□□□ -0.32
RBM39-219ENST00000453310 LOC100506127A0A0U1RQW1 187 aa13.03□□□□□ -0.32
RBM39-219ENST00000453310 DVL1O14640 695 aa13.03□□□□□ -0.32
RBM39-219ENST00000453310 FCN3O75636 299 aa13.03□□□□□ -0.32
RBM39-219ENST00000453310 HTR3BO95264 441 aa13.03□□□□□ -0.32
RBM39-219ENST00000453310 TGFAP01135 160 aa13.03□□□□□ -0.32
RBM39-219ENST00000453310 IKZF1Q13422 519 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms