RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-208ENST00000452047 COL10A1Q03692 680 aa10.15□□□□□ -0.78
CPSF4-208ENST00000452047 ZIK1Q3SY52 487 aaPredicted RBP10.15□□□□□ -0.78
CPSF4-208ENST00000452047 MEDAGQ5VYS4 303 aa10.15□□□□□ -0.78
CPSF4-208ENST00000452047 DHRS7BQ6IAN0 325 aaPredicted RBP10.15□□□□□ -0.78
CPSF4-208ENST00000452047 KCTD20Q7Z5Y7 419 aa10.15□□□□□ -0.78
CPSF4-208ENST00000452047 CBR4Q8N4T8 237 aa10.15□□□□□ -0.78
CPSF4-208ENST00000452047 SLAMF9Q96A28 289 aa10.15□□□□□ -0.78
CPSF4-208ENST00000452047 RNFT2Q96EX2 444 aa10.15□□□□□ -0.78
CPSF4-208ENST00000452047 ADAT3Q96EY9 351 aaPredicted RBP10.15□□□□□ -0.78
CPSF4-208ENST00000452047 ADI1Q9BV57 179 aa10.15□□□□□ -0.78
CPSF4-208ENST00000452047 FRRS1LQ9P0K9 344 aa10.15□□□□□ -0.78
CPSF4-208ENST00000452047 C17orf98A8MV24 154 aa10.14□□□□□ -0.79
CPSF4-208ENST00000452047 H3BUX3 64 aa10.14□□□□□ -0.79
CPSF4-208ENST00000452047 SERPINA3P01011 423 aa10.14□□□□□ -0.79
CPSF4-208ENST00000452047 PIPP12273 146 aaPredicted RBP10.14□□□□□ -0.79
CPSF4-208ENST00000452047 GABRB1P18505 474 aa10.14□□□□□ -0.79
CPSF4-208ENST00000452047 PAX6P26367 422 aa10.14□□□□□ -0.79
CPSF4-208ENST00000452047 BMXP51813 675 aa10.14□□□□□ -0.79
CPSF4-208ENST00000452047 OR12D2P58182 307 aa10.14□□□□□ -0.79
CPSF4-208ENST00000452047 CNN3Q15417 329 aaKnown RBP10.14□□□□□ -0.79
CPSF4-208ENST00000452047 TMEM244Q5VVB8 128 aa10.14□□□□□ -0.79
CPSF4-208ENST00000452047 SLC25A26Q70HW3 274 aa10.14□□□□□ -0.79
CPSF4-208ENST00000452047 UTS2BQ765I0 119 aa10.14□□□□□ -0.79
CPSF4-208ENST00000452047 TCF23Q7RTU1 214 aa10.14□□□□□ -0.79
CPSF4-208ENST00000452047 C10orf67Q8IYJ2 551 aa10.14□□□□□ -0.79
CPSF4-208ENST00000452047 ASCC1Q8N9N2 400 aaKnown RBP10.14□□□□□ -0.79
CPSF4-208ENST00000452047 DNAAF1Q8NEP3 725 aa10.14□□□□□ -0.79
CPSF4-208ENST00000452047 BORCS8Q96FH0 119 aa10.14□□□□□ -0.79
CPSF4-208ENST00000452047 SSX3Q99909 188 aa10.14□□□□□ -0.79
CPSF4-208ENST00000452047 MEGF9Q9H1U4 602 aa10.14□□□□□ -0.79
CPSF4-208ENST00000452047 HEXA-AS1Q9H8Q6 139 aa10.14□□□□□ -0.79
CPSF4-208ENST00000452047 IL36RNQ9UBH0 155 aa10.14□□□□□ -0.79
CPSF4-208ENST00000452047 AASSQ9UDR5 926 aa10.14□□□□□ -0.79
CPSF4-208ENST00000452047 EXOGQ9Y2C4 368 aaKnown RBP10.14□□□□□ -0.79
CPSF4-208ENST00000452047 hCG_1809904A0A1W2PP81 198 aa10.13□□□□□ -0.79
CPSF4-208ENST00000452047 A0A1W2PPE2 198 aa10.13□□□□□ -0.79
CPSF4-208ENST00000452047 A0A1W2PR64 198 aa10.13□□□□□ -0.79
CPSF4-208ENST00000452047 A0A1W2PRV1 198 aa10.13□□□□□ -0.79
CPSF4-208ENST00000452047 DAPL1A0PJW8 107 aa10.13□□□□□ -0.79
CPSF4-208ENST00000452047 TMEM82A0PJX8 343 aa10.13□□□□□ -0.79
CPSF4-208ENST00000452047 MEGF11A6BM72 1044 aa10.13□□□□□ -0.79
CPSF4-208ENST00000452047 RBP4P02753 201 aa10.13□□□□□ -0.79
CPSF4-208ENST00000452047 CHRM2P08172 466 aa10.13□□□□□ -0.79
CPSF4-208ENST00000452047 NPBWR2P48146 333 aa10.13□□□□□ -0.79
CPSF4-208ENST00000452047 RBP2P50120 134 aa10.13□□□□□ -0.79
CPSF4-208ENST00000452047 CCR9P51686 369 aa10.13□□□□□ -0.79
CPSF4-208ENST00000452047 ZNF91Q05481 1191 aa10.13□□□□□ -0.79
CPSF4-208ENST00000452047 AANATQ16613 207 aa10.13□□□□□ -0.79
CPSF4-208ENST00000452047 LRRC75BQ2VPJ9 315 aa10.13□□□□□ -0.79
CPSF4-208ENST00000452047 CRIP3Q6Q6R5 217 aa10.13□□□□□ -0.79
CPSF4-208ENST00000452047 ZNF782Q6ZMW2 699 aaPredicted RBP10.13□□□□□ -0.79
CPSF4-208ENST00000452047 CCDC121Q6ZUS5 278 aa10.13□□□□□ -0.79
CPSF4-208ENST00000452047 Q8IYB0 196 aa10.13□□□□□ -0.79
CPSF4-208ENST00000452047 OR8H2Q8N162 312 aa10.13□□□□□ -0.79
CPSF4-208ENST00000452047 ACBD7Q8N6N7 88 aa10.13□□□□□ -0.79
CPSF4-208ENST00000452047 OR51A4Q8NGJ6 313 aa10.13□□□□□ -0.79
CPSF4-208ENST00000452047 OR10AC1Q8NH08 325 aa10.13□□□□□ -0.79
CPSF4-208ENST00000452047 LGALS12Q96DT0 336 aa10.13□□□□□ -0.79
CPSF4-208ENST00000452047 PELI1Q96FA3 418 aa10.13□□□□□ -0.79
CPSF4-208ENST00000452047 SEBOXQ9HB31 216 aaPredicted RBP10.13□□□□□ -0.79
CPSF4-208ENST00000452047 TRBV2A0A0J9YWF9 115 aa10.12□□□□□ -0.79
CPSF4-208ENST00000452047 FAM90A8PA6NJQ4 464 aa10.12□□□□□ -0.79
CPSF4-208ENST00000452047 OR4C45A6NMZ5 311 aa10.12□□□□□ -0.79
CPSF4-208ENST00000452047 ODF3BA8MYP8 253 aa10.12□□□□□ -0.79
CPSF4-208ENST00000452047 KCNAB3O43448 404 aa10.12□□□□□ -0.79
CPSF4-208ENST00000452047 INMTO95050 263 aa10.12□□□□□ -0.79
CPSF4-208ENST00000452047 ZNF728P0DKX0 622 aa10.12□□□□□ -0.79
CPSF4-208ENST00000452047 DBTP11182 482 aaKnown RBP10.12□□□□□ -0.79
CPSF4-208ENST00000452047 COX7A1P24310 79 aa10.12□□□□□ -0.79
CPSF4-208ENST00000452047 AZGP1P25311 298 aaKnown RBP10.12□□□□□ -0.79
CPSF4-208ENST00000452047 EDDM3BP56851 147 aa10.12□□□□□ -0.79
CPSF4-208ENST00000452047 ACTA2P62736 377 aa10.12□□□□□ -0.79
CPSF4-208ENST00000452047 ACTG2P63267 376 aa10.12□□□□□ -0.79
CPSF4-208ENST00000452047 ASPHD2Q6ICH7 369 aa10.12□□□□□ -0.79
CPSF4-208ENST00000452047 SLC35E4Q6ICL7 350 aa10.12□□□□□ -0.79
CPSF4-208ENST00000452047 EGFL6Q8IUX8 553 aa10.12□□□□□ -0.79
CPSF4-208ENST00000452047 ENTHD1Q8IYW4 607 aa10.12□□□□□ -0.79
CPSF4-208ENST00000452047 PPP1R35Q8TAP8 253 aa10.12□□□□□ -0.79
CPSF4-208ENST00000452047 PIFOQ8TCI5 191 aa10.12□□□□□ -0.79
CPSF4-208ENST00000452047 EMG1Q92979 244 aaKnown RBP10.12□□□□□ -0.79
CPSF4-208ENST00000452047 SPSB1Q96BD6 273 aa10.12□□□□□ -0.79
CPSF4-208ENST00000452047 FGGYQ96C11 551 aa10.12□□□□□ -0.79
CPSF4-208ENST00000452047 C4orf36Q96KX1 117 aa10.12□□□□□ -0.79
CPSF4-208ENST00000452047 SNX22Q96L94 193 aa10.12□□□□□ -0.79
CPSF4-208ENST00000452047 SLC29A1Q99808 456 aa10.12□□□□□ -0.79
CPSF4-208ENST00000452047 ZNF649Q9BS31 505 aa10.12□□□□□ -0.79
CPSF4-208ENST00000452047 PPA2Q9H2U2 334 aa10.12□□□□□ -0.79
CPSF4-208ENST00000452047 RBFOX1Q9NWB1 397 aaKnown RBP10.12□□□□□ -0.79
CPSF4-208ENST00000452047 GMPPBQ9Y5P6 360 aa10.12□□□□□ -0.79
CPSF4-208ENST00000452047 MEX3AA1L020 520 aaKnown RBP10.11□□□□□ -0.79
CPSF4-208ENST00000452047 SNTNA6NMZ2 147 aa10.11□□□□□ -0.79
CPSF4-208ENST00000452047 J3QLW9 94 aa10.11□□□□□ -0.79
CPSF4-208ENST00000452047 TIMM23O14925 209 aa10.11□□□□□ -0.79
CPSF4-208ENST00000452047 PSPNO60542 156 aa10.11□□□□□ -0.79
CPSF4-208ENST00000452047 HAND1O96004 215 aa10.11□□□□□ -0.79
CPSF4-208ENST00000452047 IGHA1P01876 353 aa10.11□□□□□ -0.79
CPSF4-208ENST00000452047 HTR1AP08908 422 aa10.11□□□□□ -0.79
CPSF4-208ENST00000452047 ZNF19P17023 458 aa10.11□□□□□ -0.79
CPSF4-208ENST00000452047 ZNF20P17024 532 aa10.11□□□□□ -0.79
CPSF4-208ENST00000452047 ATF1P18846 271 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms