RNA–Protein interactions for RNA: ENST00000449131.6

BEST1-202, Transcript of bestrophin 1, humanhuman

TSL 1 (best) BASIC

Gene BEST1, Length 4,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-202ENST00000449131 DHRS13Q6UX07 377 aa6.32□□□□□ -1.4
BEST1-202ENST00000449131 HPSE2Q8WWQ2 592 aa6.32□□□□□ -1.4
BEST1-202ENST00000449131 ISOC2Q96AB3 205 aa6.32□□□□□ -1.4
BEST1-202ENST00000449131 TAAR9Q96RI9 348 aa6.32□□□□□ -1.4
BEST1-202ENST00000449131 STRAPQ9Y3F4 350 aaKnown RBP6.32□□□□□ -1.4
BEST1-202ENST00000449131 DOCK8Q8NF50 2099 aa6.32□□□□□ -1.4
BEST1-202ENST00000449131 TRAV20A0A0B4J274 112 aa6.32□□□□□ -1.4
BEST1-202ENST00000449131 PRSS44E7EML9 344 aa6.32□□□□□ -1.4
BEST1-202ENST00000449131 ZIC2O95409 532 aaPredicted RBP6.32□□□□□ -1.4
BEST1-202ENST00000449131 CCL3P10147 92 aa6.32□□□□□ -1.4
BEST1-202ENST00000449131 SRD5A2P31213 254 aa6.32□□□□□ -1.4
BEST1-202ENST00000449131 PSMB3P49720 205 aa6.32□□□□□ -1.4
BEST1-202ENST00000449131 FLI1Q01543 452 aaPredicted RBP6.32□□□□□ -1.4
BEST1-202ENST00000449131 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.32□□□□□ -1.4
BEST1-202ENST00000449131 PRAMEF5Q5TYX0 476 aa6.32□□□□□ -1.4
BEST1-202ENST00000449131 PRAMEF6Q5VXH4 476 aa6.32□□□□□ -1.4
BEST1-202ENST00000449131 OR2T2Q6IF00 324 aa6.32□□□□□ -1.4
BEST1-202ENST00000449131 SLC16A13Q7RTY0 426 aa6.32□□□□□ -1.4
BEST1-202ENST00000449131 STPG2Q8N412 459 aa6.32□□□□□ -1.4
BEST1-202ENST00000449131 ZADH2Q8N4Q0 377 aa6.32□□□□□ -1.4
BEST1-202ENST00000449131 OR8U1Q8NH10 309 aa6.32□□□□□ -1.4
BEST1-202ENST00000449131 LHX4Q969G2 390 aa6.32□□□□□ -1.4
BEST1-202ENST00000449131 RIMS4Q9H426 269 aaPredicted RBP6.32□□□□□ -1.4
BEST1-202ENST00000449131 PATJQ8NI35 1801 aa6.32□□□□□ -1.4
BEST1-202ENST00000449131 A0A1W2PR80 420 aa6.32□□□□□ -1.4
BEST1-202ENST00000449131 RNASEK-C17orf49H0YIS7 233 aa6.32□□□□□ -1.4
BEST1-202ENST00000449131 FREM3P0C091 2139 aa6.32□□□□□ -1.4
BEST1-202ENST00000449131 TMEM11P17152 192 aa6.32□□□□□ -1.4
BEST1-202ENST00000449131 RPS4Y1P22090 263 aaKnown RBP6.32□□□□□ -1.4
BEST1-202ENST00000449131 RAC3P60763 192 aa6.32□□□□□ -1.4
BEST1-202ENST00000449131 SNRPEP62304 92 aaKnown RBP6.32□□□□□ -1.4
BEST1-202ENST00000449131 MGAT2Q10469 447 aa6.32□□□□□ -1.4
BEST1-202ENST00000449131 GAB4Q2WGN9 574 aa6.32□□□□□ -1.4
BEST1-202ENST00000449131 GGNBP1Q5YKI7 109 aa6.32□□□□□ -1.4
BEST1-202ENST00000449131 KCNIP4Q6PIL6 250 aa6.32□□□□□ -1.4
BEST1-202ENST00000449131 CLRN3Q8NCR9 226 aa6.32□□□□□ -1.4
BEST1-202ENST00000449131 ZNRF4Q8WWF5 429 aa6.32□□□□□ -1.4
BEST1-202ENST00000449131 ZNF501Q96CX3 271 aaPredicted RBP6.32□□□□□ -1.4
BEST1-202ENST00000449131 USB1Q9BQ65 265 aaKnown RBP6.32□□□□□ -1.4
BEST1-202ENST00000449131 RSRP1Q9BUV0 290 aa6.32□□□□□ -1.4
BEST1-202ENST00000449131 CYB5R1Q9UHQ9 305 aa6.32□□□□□ -1.4
BEST1-202ENST00000449131 MRPS18BQ9Y676 258 aaKnown RBP6.32□□□□□ -1.4
BEST1-202ENST00000449131 FAM74A7A6NL05 159 aa6.31□□□□□ -1.4
BEST1-202ENST00000449131 ENSAO43768 121 aaKnown RBP6.31□□□□□ -1.4
BEST1-202ENST00000449131 PDCD6O75340 191 aa6.31□□□□□ -1.4
BEST1-202ENST00000449131 DXOO77932 396 aaKnown RBP6.31□□□□□ -1.4
BEST1-202ENST00000449131 ONECUT2O95948 504 aa6.31□□□□□ -1.4
BEST1-202ENST00000449131 PNPP00491 289 aa6.31□□□□□ -1.4
BEST1-202ENST00000449131 CST4P01036 141 aa6.31□□□□□ -1.4
BEST1-202ENST00000449131 FAM74A3Q4VXF1 159 aa6.31□□□□□ -1.4
BEST1-202ENST00000449131 COL13A1Q5TAT6 717 aaPredicted RBP6.31□□□□□ -1.4
BEST1-202ENST00000449131 OR2Y1Q8NGV0 311 aa6.31□□□□□ -1.4
BEST1-202ENST00000449131 H1FXQ92522 213 aaKnown RBP6.31□□□□□ -1.4
BEST1-202ENST00000449131 RAB39BQ96DA2 213 aa6.31□□□□□ -1.4
BEST1-202ENST00000449131 PECRQ9BY49 303 aa6.31□□□□□ -1.4
BEST1-202ENST00000449131 MPDZO75970 2070 aa6.31□□□□□ -1.4
BEST1-202ENST00000449131 SHANK1Q9Y566 2161 aa6.31□□□□□ -1.4
BEST1-202ENST00000449131 IGHV5-10-1A0A0J9YXX1 117 aa6.31□□□□□ -1.4
BEST1-202ENST00000449131 A0A1W2PPC1 479 aa6.31□□□□□ -1.4
BEST1-202ENST00000449131 TERTO14746 1132 aaKnown RBP6.31□□□□□ -1.4
BEST1-202ENST00000449131 UPK3AO75631 287 aa6.31□□□□□ -1.4
BEST1-202ENST00000449131 PF4P02776 101 aa6.31□□□□□ -1.4
BEST1-202ENST00000449131 MT-ND4LP03901 98 aa6.31□□□□□ -1.4
BEST1-202ENST00000449131 OR5AC1P0C628 307 aa6.31□□□□□ -1.4
BEST1-202ENST00000449131 LSM6P62312 80 aaKnown RBP6.31□□□□□ -1.4
BEST1-202ENST00000449131 PJVKQ0ZLH3 352 aa6.31□□□□□ -1.4
BEST1-202ENST00000449131 INPP5JQ15735 1006 aaPredicted RBP6.31□□□□□ -1.4
BEST1-202ENST00000449131 CEBPEQ15744 281 aa6.31□□□□□ -1.4
BEST1-202ENST00000449131 JMJD6Q6NYC1 403 aaPredicted RBP6.31□□□□□ -1.4
BEST1-202ENST00000449131 PRSS54Q6PEW0 395 aa6.31□□□□□ -1.4
BEST1-202ENST00000449131 CLEC18BQ6UXF7 455 aa6.31□□□□□ -1.4
BEST1-202ENST00000449131 FAM185AQ8N0U4 392 aa6.31□□□□□ -1.4
BEST1-202ENST00000449131 ZNF485Q8NCK3 441 aa6.31□□□□□ -1.4
BEST1-202ENST00000449131 OR1J1Q8NGS3 322 aa6.31□□□□□ -1.4
BEST1-202ENST00000449131 SARAFQ96BY9 339 aa6.31□□□□□ -1.4
BEST1-202ENST00000449131 SLC25A38Q96DW6 304 aa6.31□□□□□ -1.4
BEST1-202ENST00000449131 ZPBPQ9BS86 351 aa6.31□□□□□ -1.4
BEST1-202ENST00000449131 PSENENQ9NZ42 101 aa6.31□□□□□ -1.4
BEST1-202ENST00000449131 GAB2Q9UQC2 676 aa6.31□□□□□ -1.4
BEST1-202ENST00000449131 DIDO1Q9BTC0 2240 aaKnown RBP6.31□□□□□ -1.4
BEST1-202ENST00000449131 CCDC187A0A096LP49 1063 aa6.31□□□□□ -1.4
BEST1-202ENST00000449131 A0A1B0GTQ1 180 aa6.31□□□□□ -1.4
BEST1-202ENST00000449131 ZNF98A6NK75 572 aa6.31□□□□□ -1.4
BEST1-202ENST00000449131 AQP7P3A6NL99 342 aa6.31□□□□□ -1.4
BEST1-202ENST00000449131 TSPAN2O60636 221 aa6.31□□□□□ -1.4
BEST1-202ENST00000449131 SCAF4O95104 1147 aaKnown RBP6.31□□□□□ -1.4
BEST1-202ENST00000449131 TTRP02766 147 aa6.31□□□□□ -1.4
BEST1-202ENST00000449131 CD1AP06126 327 aa6.31□□□□□ -1.4
BEST1-202ENST00000449131 CRHP06850 196 aa6.31□□□□□ -1.4
BEST1-202ENST00000449131 NMBP08949 121 aa6.31□□□□□ -1.4
BEST1-202ENST00000449131 NQO2P16083 231 aa6.31□□□□□ -1.4
BEST1-202ENST00000449131 SELEP16581 610 aa6.31□□□□□ -1.4
BEST1-202ENST00000449131 NDUFB7P17568 137 aa6.31□□□□□ -1.4
BEST1-202ENST00000449131 MPLP40238 635 aa6.31□□□□□ -1.4
BEST1-202ENST00000449131 GNG3P63215 75 aa6.31□□□□□ -1.4
BEST1-202ENST00000449131 DHODHQ02127 395 aa6.31□□□□□ -1.4
BEST1-202ENST00000449131 PRDX4Q13162 271 aa6.31□□□□□ -1.4
BEST1-202ENST00000449131 BATFQ16520 125 aa6.31□□□□□ -1.4
BEST1-202ENST00000449131 ZNF239Q16600 458 aaKnown RBP6.31□□□□□ -1.4
BEST1-202ENST00000449131 MICBQ29980 383 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms