RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 HPGDSO60760 199 aa11.83□□□□□ -0.52
SHMT2-203ENST00000449049 TPPPO94811 219 aa11.83□□□□□ -0.52
SHMT2-203ENST00000449049 F12P00748 615 aaPredicted RBP11.83□□□□□ -0.52
SHMT2-203ENST00000449049 GTF2F2P13984 249 aa11.83□□□□□ -0.52
SHMT2-203ENST00000449049 MGMTP16455 207 aa11.83□□□□□ -0.52
SHMT2-203ENST00000449049 EGR1P18146 543 aa11.83□□□□□ -0.52
SHMT2-203ENST00000449049 RBMXP38159 391 aaKnown RBP11.83□□□□□ -0.52
SHMT2-203ENST00000449049 NHLRC3Q5JS37 347 aa11.83□□□□□ -0.52
SHMT2-203ENST00000449049 UBE2NLQ5JXB2 153 aa11.83□□□□□ -0.52
SHMT2-203ENST00000449049 OSR2Q8N2R0 312 aa11.83□□□□□ -0.52
SHMT2-203ENST00000449049 SAMD12Q8N8I0 201 aa11.83□□□□□ -0.52
SHMT2-203ENST00000449049 OR51T1Q8NGJ9 327 aa11.83□□□□□ -0.52
SHMT2-203ENST00000449049 NRGNQ92686 78 aa11.83□□□□□ -0.52
SHMT2-203ENST00000449049 YIPF5Q969M3 257 aa11.83□□□□□ -0.52
SHMT2-203ENST00000449049 TMEM59Q9BXS4 323 aa11.83□□□□□ -0.52
SHMT2-203ENST00000449049 BANF2Q9H503 90 aa11.83□□□□□ -0.52
SHMT2-203ENST00000449049 HMG20AQ9NP66 347 aa11.83□□□□□ -0.52
SHMT2-203ENST00000449049 RASL12Q9NYN1 266 aa11.83□□□□□ -0.52
SHMT2-203ENST00000449049 TREM2Q9NZC2 230 aa11.83□□□□□ -0.52
SHMT2-203ENST00000449049 NPTNQ9Y639 398 aa11.83□□□□□ -0.52
SHMT2-203ENST00000449049 DSCAMO60469 2012 aa11.82□□□□□ -0.52
SHMT2-203ENST00000449049 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.82□□□□□ -0.52
SHMT2-203ENST00000449049 MPIG6BO95866 241 aa11.82□□□□□ -0.52
SHMT2-203ENST00000449049 CYB5R3P00387 301 aaPredicted RBP11.82□□□□□ -0.52
SHMT2-203ENST00000449049 IRF2P14316 349 aa11.82□□□□□ -0.52
SHMT2-203ENST00000449049 PAX1P15863 534 aa11.82□□□□□ -0.52
SHMT2-203ENST00000449049 EFNA4P52798 201 aa11.82□□□□□ -0.52
SHMT2-203ENST00000449049 RPS27AP62979 156 aaKnown RBP11.82□□□□□ -0.52
SHMT2-203ENST00000449049 BIVMQ86UB2 503 aa11.82□□□□□ -0.52
SHMT2-203ENST00000449049 LAX1Q8IWV1 398 aa11.82□□□□□ -0.52
SHMT2-203ENST00000449049 CADM3Q8N126 398 aa11.82□□□□□ -0.52
SHMT2-203ENST00000449049 FAM58AQ8N1B3 248 aa11.82□□□□□ -0.52
SHMT2-203ENST00000449049 OR6Q1Q8NGQ2 317 aa11.82□□□□□ -0.52
SHMT2-203ENST00000449049 RDH5Q92781 318 aa11.82□□□□□ -0.52
SHMT2-203ENST00000449049 EMG1Q92979 244 aaKnown RBP11.82□□□□□ -0.52
SHMT2-203ENST00000449049 TM2D1Q9BX74 207 aa11.82□□□□□ -0.52
SHMT2-203ENST00000449049 WDR12Q9GZL7 423 aaKnown RBP11.82□□□□□ -0.52
SHMT2-203ENST00000449049 LPAR5Q9H1C0 372 aa11.82□□□□□ -0.52
SHMT2-203ENST00000449049 ABCG5Q9H222 651 aa11.82□□□□□ -0.52
SHMT2-203ENST00000449049 ZNF701Q9NV72 531 aaPredicted RBP11.82□□□□□ -0.52
SHMT2-203ENST00000449049 DCAF16Q9NXF7 216 aa11.82□□□□□ -0.52
SHMT2-203ENST00000449049 PEX16Q9Y5Y5 336 aa11.82□□□□□ -0.52
SHMT2-203ENST00000449049 PKDREJQ9NTG1 2253 aa11.82□□□□□ -0.52
SHMT2-203ENST00000449049 C3orf80F5H4A9 247 aa11.81□□□□□ -0.52
SHMT2-203ENST00000449049 TMEM178BH3BS89 294 aa11.81□□□□□ -0.52
SHMT2-203ENST00000449049 WNT9BO14905 357 aa11.81□□□□□ -0.52
SHMT2-203ENST00000449049 RGS5O15539 181 aa11.81□□□□□ -0.52
SHMT2-203ENST00000449049 RP2O75695 350 aa11.81□□□□□ -0.52
SHMT2-203ENST00000449049 NXPH2O95156 264 aa11.81□□□□□ -0.52
SHMT2-203ENST00000449049 APOA1P02647 267 aa11.81□□□□□ -0.52
SHMT2-203ENST00000449049 GLRA1P23415 457 aa11.81□□□□□ -0.52
SHMT2-203ENST00000449049 COL8A2P25067 703 aa11.81□□□□□ -0.52
SHMT2-203ENST00000449049 ART1P52961 327 aa11.81□□□□□ -0.52
SHMT2-203ENST00000449049 RBM11P57052 281 aaKnown RBP11.81□□□□□ -0.52
SHMT2-203ENST00000449049 HOXA4Q00056 320 aaPredicted RBP11.81□□□□□ -0.52
SHMT2-203ENST00000449049 HFEQ30201 348 aa11.81□□□□□ -0.52
SHMT2-203ENST00000449049 ACP7Q6ZNF0 438 aa11.81□□□□□ -0.52
SHMT2-203ENST00000449049 C1orf87Q8N0U7 546 aa11.81□□□□□ -0.52
SHMT2-203ENST00000449049 CCL17Q92583 94 aa11.81□□□□□ -0.52
SHMT2-203ENST00000449049 Q96M66 194 aa11.81□□□□□ -0.52
SHMT2-203ENST00000449049 WDFY2Q96P53 400 aa11.81□□□□□ -0.52
SHMT2-203ENST00000449049 WDR13Q9H1Z4 485 aa11.81□□□□□ -0.52
SHMT2-203ENST00000449049 DLL4Q9NR61 685 aa11.81□□□□□ -0.52
SHMT2-203ENST00000449049 ABCA4P78363 2273 aa11.81□□□□□ -0.52
SHMT2-203ENST00000449049 UTP20O75691 2785 aaKnown RBP11.81□□□□□ -0.52
SHMT2-203ENST00000449049 HELZ2Q9BYK8 2649 aaKnown RBP11.81□□□□□ -0.52
SHMT2-203ENST00000449049 DYSFO75923 2080 aa11.81□□□□□ -0.52
SHMT2-203ENST00000449049 NDUFS7O75251 213 aa11.81□□□□□ -0.52
SHMT2-203ENST00000449049 EIF4EP06730 217 aaKnown RBP11.81□□□□□ -0.52
SHMT2-203ENST00000449049 DAOP14920 347 aa11.81□□□□□ -0.52
SHMT2-203ENST00000449049 PRKACAP17612 351 aa11.81□□□□□ -0.52
SHMT2-203ENST00000449049 ELK1P19419 428 aa11.81□□□□□ -0.52
SHMT2-203ENST00000449049 LRRC28Q86X40 367 aaPredicted RBP11.81□□□□□ -0.52
SHMT2-203ENST00000449049 FAM90A1Q86YD7 464 aa11.81□□□□□ -0.52
SHMT2-203ENST00000449049 CMTM4Q8IZR5 234 aa11.81□□□□□ -0.52
SHMT2-203ENST00000449049 FAM89BQ8N5H3 189 aa11.81□□□□□ -0.52
SHMT2-203ENST00000449049 RAB40AQ8WXH6 277 aa11.81□□□□□ -0.52
SHMT2-203ENST00000449049 POM121Q96HA1 1249 aa11.81□□□□□ -0.52
SHMT2-203ENST00000449049 URM1Q9BTM9 101 aaKnown RBP11.81□□□□□ -0.52
SHMT2-203ENST00000449049 SELENOIQ9C0D9 397 aa11.81□□□□□ -0.52
SHMT2-203ENST00000449049 AKIP1Q9NQ31 210 aa11.81□□□□□ -0.52
SHMT2-203ENST00000449049 IL36RNQ9UBH0 155 aa11.81□□□□□ -0.52
SHMT2-203ENST00000449049 USP9YO00507 2555 aaPredicted RBP11.81□□□□□ -0.52
SHMT2-203ENST00000449049 DOPEY2Q9Y3R5 2298 aa11.8□□□□□ -0.52
SHMT2-203ENST00000449049 LY6HO94772 140 aa11.8□□□□□ -0.52
SHMT2-203ENST00000449049 IL13RA2Q14627 380 aa11.8□□□□□ -0.52
SHMT2-203ENST00000449049 KCNJ8Q15842 424 aa11.8□□□□□ -0.52
SHMT2-203ENST00000449049 FAM189A2Q15884 450 aa11.8□□□□□ -0.52
SHMT2-203ENST00000449049 SMIM21Q3B7S5 101 aa11.8□□□□□ -0.52
SHMT2-203ENST00000449049 PIGYQ3MUY2 71 aa11.8□□□□□ -0.52
SHMT2-203ENST00000449049 SPIN3Q5JUX0 258 aa11.8□□□□□ -0.52
SHMT2-203ENST00000449049 S100ZQ8WXG8 99 aa11.8□□□□□ -0.52
SHMT2-203ENST00000449049 NICN1Q9BSH3 213 aa11.8□□□□□ -0.52
SHMT2-203ENST00000449049 ADAM30Q9UKF2 790 aa11.8□□□□□ -0.52
SHMT2-203ENST00000449049 ST3GAL6Q9Y274 331 aa11.8□□□□□ -0.52
SHMT2-203ENST00000449049 CACNA1DQ01668 2161 aa11.8□□□□□ -0.52
SHMT2-203ENST00000449049 ROS1P08922 2347 aa11.8□□□□□ -0.52
SHMT2-203ENST00000449049 A0A0A6YYD4 124 aa11.8□□□□□ -0.52
SHMT2-203ENST00000449049 LYNX1G3V0Z9 82 aa11.8□□□□□ -0.52
SHMT2-203ENST00000449049 KNG1P01042 644 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms