RNA–Protein interactions for RNA: ENST00000444621.1

HLA-F-221, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 495 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-221ENST00000444621 DNAJC9-AS1A6NH13 148 aa9.13□□□□□ -0.95
HLA-F-221ENST00000444621 INMTO95050 263 aa9.13□□□□□ -0.95
HLA-F-221ENST00000444621 RNASE1P07998 156 aaKnown RBP9.13□□□□□ -0.95
HLA-F-221ENST00000444621 HCKP08631 526 aa9.13□□□□□ -0.95
HLA-F-221ENST00000444621 DUX4L2P0CJ85 424 aa9.13□□□□□ -0.95
HLA-F-221ENST00000444621 DUX4L3P0CJ86 424 aa9.13□□□□□ -0.95
HLA-F-221ENST00000444621 DUX4L4P0CJ87 422 aa9.13□□□□□ -0.95
HLA-F-221ENST00000444621 DUX4L5P0CJ88 424 aa9.13□□□□□ -0.95
HLA-F-221ENST00000444621 DUX4L6P0CJ89 424 aa9.13□□□□□ -0.95
HLA-F-221ENST00000444621 DUX4L7P0CJ90 424 aa9.13□□□□□ -0.95
HLA-F-221ENST00000444621 MMP9P14780 707 aa9.13□□□□□ -0.95
HLA-F-221ENST00000444621 POU3F4P49335 361 aa9.13□□□□□ -0.95
HLA-F-221ENST00000444621 NANOS3P60323 173 aaKnown RBP9.13□□□□□ -0.95
HLA-F-221ENST00000444621 RPL31P62899 125 aaKnown RBP9.13□□□□□ -0.95
HLA-F-221ENST00000444621 ELF3P78545 371 aaPredicted RBP9.13□□□□□ -0.95
HLA-F-221ENST00000444621 DEFB112Q30KQ8 113 aa9.13□□□□□ -0.95
HLA-F-221ENST00000444621 RPL22L1Q6P5R6 122 aaKnown RBP9.13□□□□□ -0.95
HLA-F-221ENST00000444621 DUX4L9Q6RFH8 374 aaPredicted RBP9.13□□□□□ -0.95
HLA-F-221ENST00000444621 METAP1DQ6UB28 335 aaPredicted RBP9.13□□□□□ -0.95
HLA-F-221ENST00000444621 GDPD3Q7L5L3 318 aa9.13□□□□□ -0.95
HLA-F-221ENST00000444621 CALHM1Q8IU99 346 aa9.13□□□□□ -0.95
HLA-F-221ENST00000444621 TMEM86BQ8N661 226 aa9.13□□□□□ -0.95
HLA-F-221ENST00000444621 ASCC1Q8N9N2 400 aaKnown RBP9.13□□□□□ -0.95
HLA-F-221ENST00000444621 SLAMF9Q96A28 289 aa9.13□□□□□ -0.95
HLA-F-221ENST00000444621 TMEM80Q96HE8 168 aa9.13□□□□□ -0.95
HLA-F-221ENST00000444621 ZNF747Q9BV97 191 aa9.13□□□□□ -0.95
HLA-F-221ENST00000444621 DPAGT1Q9H3H5 408 aa9.13□□□□□ -0.95
HLA-F-221ENST00000444621 HEXA-AS1Q9H8Q6 139 aa9.13□□□□□ -0.95
HLA-F-221ENST00000444621 ISG20L2Q9H9L3 353 aaKnown RBP9.13□□□□□ -0.95
HLA-F-221ENST00000444621 RHOFQ9HBH0 211 aa9.13□□□□□ -0.95
HLA-F-221ENST00000444621 DUX4Q9UBX2 424 aa9.13□□□□□ -0.95
HLA-F-221ENST00000444621 MAB21L2Q9Y586 359 aa9.13□□□□□ -0.95
HLA-F-221ENST00000444621 POMT1Q9Y6A1 747 aa9.13□□□□□ -0.95
HLA-F-221ENST00000444621 FUOMA2VDF0 154 aa9.12□□□□□ -0.95
HLA-F-221ENST00000444621 EFCAB10A6NFE3 127 aa9.12□□□□□ -0.95
HLA-F-221ENST00000444621 OR4C45A6NMZ5 311 aa9.12□□□□□ -0.95
HLA-F-221ENST00000444621 SH2D1BO14796 132 aa9.12□□□□□ -0.95
HLA-F-221ENST00000444621 HOXA3O43365 443 aaPredicted RBP9.12□□□□□ -0.95
HLA-F-221ENST00000444621 TK1P04183 234 aa9.12□□□□□ -0.95
HLA-F-221ENST00000444621 FBP1P09467 338 aa9.12□□□□□ -0.95
HLA-F-221ENST00000444621 HKR1P10072 659 aa9.12□□□□□ -0.95
HLA-F-221ENST00000444621 AMY2BP19961 511 aa9.12□□□□□ -0.95
HLA-F-221ENST00000444621 PEX2P28328 305 aa9.12□□□□□ -0.95
HLA-F-221ENST00000444621 CAPGP40121 348 aa9.12□□□□□ -0.95
HLA-F-221ENST00000444621 BMXP51813 675 aa9.12□□□□□ -0.95
HLA-F-221ENST00000444621 UBE2E1P51965 193 aa9.12□□□□□ -0.95
HLA-F-221ENST00000444621 LGALS4P56470 323 aa9.12□□□□□ -0.95
HLA-F-221ENST00000444621 GABPB1Q06547 395 aaPredicted RBP9.12□□□□□ -0.95
HLA-F-221ENST00000444621 SLC9A3R2Q15599 337 aa9.12□□□□□ -0.95
HLA-F-221ENST00000444621 C16orf87Q6PH81 154 aa9.12□□□□□ -0.95
HLA-F-221ENST00000444621 SHISA2Q6UWI4 295 aa9.12□□□□□ -0.95
HLA-F-221ENST00000444621 TREML4Q6UXN2 200 aa9.12□□□□□ -0.95
HLA-F-221ENST00000444621 Q6YL49 198 aa9.12□□□□□ -0.95
HLA-F-221ENST00000444621 PDZD9Q8IXQ8 264 aa9.12□□□□□ -0.95
HLA-F-221ENST00000444621 FAM58AQ8N1B3 248 aa9.12□□□□□ -0.95
HLA-F-221ENST00000444621 BATF2Q8N1L9 274 aa9.12□□□□□ -0.95
HLA-F-221ENST00000444621 STX19Q8N4C7 294 aa9.12□□□□□ -0.95
HLA-F-221ENST00000444621 CD177Q8N6Q3 437 aa9.12□□□□□ -0.95
HLA-F-221ENST00000444621 CNIH3Q8TBE1 160 aa9.12□□□□□ -0.95
HLA-F-221ENST00000444621 SSMEM1Q8WWF3 244 aa9.12□□□□□ -0.95
HLA-F-221ENST00000444621 ADAT3Q96EY9 351 aaPredicted RBP9.12□□□□□ -0.95
HLA-F-221ENST00000444621 SNX22Q96L94 193 aa9.12□□□□□ -0.95
HLA-F-221ENST00000444621 DUX5Q96PT3 197 aa9.12□□□□□ -0.95
HLA-F-221ENST00000444621 GPER1Q99527 375 aa9.12□□□□□ -0.95
HLA-F-221ENST00000444621 JAM3Q9BX67 310 aa9.12□□□□□ -0.95
HLA-F-221ENST00000444621 VCX3BQ9H321 246 aa9.12□□□□□ -0.95
HLA-F-221ENST00000444621 HES4Q9HCC6 221 aa9.12□□□□□ -0.95
HLA-F-221ENST00000444621 ESM1Q9NQ30 184 aa9.12□□□□□ -0.95
HLA-F-221ENST00000444621 SIRT7Q9NRC8 400 aa9.12□□□□□ -0.95
HLA-F-221ENST00000444621 MTCH1Q9NZJ7 389 aa9.12□□□□□ -0.95
HLA-F-221ENST00000444621 ZNF222Q9UK12 451 aa9.12□□□□□ -0.95
HLA-F-221ENST00000444621 K7N7A8 449 aa9.11□□□□□ -0.95
HLA-F-221ENST00000444621 SULT1B1O43704 296 aa9.11□□□□□ -0.95
HLA-F-221ENST00000444621 WBP4O75554 376 aaKnown RBP9.11□□□□□ -0.95
HLA-F-221ENST00000444621 ALX3O95076 343 aa9.11□□□□□ -0.95
HLA-F-221ENST00000444621 MT-ND2P03891 347 aa9.11□□□□□ -0.95
HLA-F-221ENST00000444621 TFF1P04155 84 aa9.11□□□□□ -0.95
HLA-F-221ENST00000444621 TMEM225BP0DP42 221 aa9.11□□□□□ -0.95
HLA-F-221ENST00000444621 SELLP14151 372 aa9.11□□□□□ -0.95
HLA-F-221ENST00000444621 PRKACAP17612 351 aa9.11□□□□□ -0.95
HLA-F-221ENST00000444621 RAB3AP20336 220 aa9.11□□□□□ -0.95
HLA-F-221ENST00000444621 GABRR1P24046 479 aa9.11□□□□□ -0.95
HLA-F-221ENST00000444621 EDDM3BP56851 147 aa9.11□□□□□ -0.95
HLA-F-221ENST00000444621 ERVK11-1P61568 191 aa9.11□□□□□ -0.95
HLA-F-221ENST00000444621 ADARB1P78563 741 aaKnown RBP9.11□□□□□ -0.95
HLA-F-221ENST00000444621 COL10A1Q03692 680 aa9.11□□□□□ -0.95
HLA-F-221ENST00000444621 PDZK1IP1Q13113 114 aa9.11□□□□□ -0.95
HLA-F-221ENST00000444621 SMN1Q16637 294 aaKnown RBP9.11□□□□□ -0.95
HLA-F-221ENST00000444621 SPIN3Q5JUX0 258 aa9.11□□□□□ -0.95
HLA-F-221ENST00000444621 OGFRL1Q5TC84 451 aaPredicted RBP9.11□□□□□ -0.95
HLA-F-221ENST00000444621 RUSC1-AS1Q66K80 236 aa9.11□□□□□ -0.95
HLA-F-221ENST00000444621 HIST2H2BDQ6DRA6 164 aa9.11□□□□□ -0.95
HLA-F-221ENST00000444621 SATL1Q86VE3 508 aa9.11□□□□□ -0.95
HLA-F-221ENST00000444621 SAXO1Q8IYX7 474 aa9.11□□□□□ -0.95
HLA-F-221ENST00000444621 FGFRL1Q8N441 504 aa9.11□□□□□ -0.95
HLA-F-221ENST00000444621 OR13C9Q8NGT0 318 aa9.11□□□□□ -0.95
HLA-F-221ENST00000444621 GPR148Q8TDV2 347 aa9.11□□□□□ -0.95
HLA-F-221ENST00000444621 APH1BQ8WW43 257 aa9.11□□□□□ -0.95
HLA-F-221ENST00000444621 ZNF48Q96MX3 618 aaPredicted RBP9.11□□□□□ -0.95
HLA-F-221ENST00000444621 S100A13Q99584 98 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms