RNA–Protein interactions for RNA: ENST00000443621.1

LINC00393-201, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 282 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-201ENST00000443621 ZNF345Q14585 488 aa2.42□□□□□ -2.02
LINC00393-201ENST00000443621 ODF4Q2M2E3 257 aa2.42□□□□□ -2.02
LINC00393-201ENST00000443621 LINC00303Q3SY05 128 aa2.42□□□□□ -2.02
LINC00393-201ENST00000443621 ZFP69Q49AA0 526 aa2.42□□□□□ -2.02
LINC00393-201ENST00000443621 SLC22A6Q4U2R8 563 aa2.42□□□□□ -2.02
LINC00393-201ENST00000443621 PLAC9Q5JTB6 97 aa2.42□□□□□ -2.02
LINC00393-201ENST00000443621 ATP1A1-AS1Q5TC04 95 aa2.42□□□□□ -2.02
LINC00393-201ENST00000443621 PLCXD3Q63HM9 321 aa2.42□□□□□ -2.02
LINC00393-201ENST00000443621 ZNF660Q6AZW8 331 aaPredicted RBP2.42□□□□□ -2.02
LINC00393-201ENST00000443621 SLC35E4Q6ICL7 350 aa2.42□□□□□ -2.02
LINC00393-201ENST00000443621 LIN54Q6MZP7 749 aa2.42□□□□□ -2.02
LINC00393-201ENST00000443621 IDO2Q6ZQW0 420 aa2.42□□□□□ -2.02
LINC00393-201ENST00000443621 SEM1Q6ZVN7 128 aa2.42□□□□□ -2.02
LINC00393-201ENST00000443621 MOB3CQ70IA8 216 aa2.42□□□□□ -2.02
LINC00393-201ENST00000443621 ZNF767PQ75MW2 155 aa2.42□□□□□ -2.02
LINC00393-201ENST00000443621 ZSCAN2Q7Z7L9 614 aaPredicted RBP2.42□□□□□ -2.02
LINC00393-201ENST00000443621 TRAPPC6BQ86SZ2 158 aa2.42□□□□□ -2.02
LINC00393-201ENST00000443621 BIVMQ86UB2 503 aa2.42□□□□□ -2.02
LINC00393-201ENST00000443621 NOXA1Q86UR1 476 aa2.42□□□□□ -2.02
LINC00393-201ENST00000443621 MDP1Q86V88 176 aa2.42□□□□□ -2.02
LINC00393-201ENST00000443621 FJX1Q86VR8 437 aa2.42□□□□□ -2.02
LINC00393-201ENST00000443621 DOLPP1Q86YN1 238 aa2.42□□□□□ -2.02
LINC00393-201ENST00000443621 SNX29P2Q8IUI4 249 aa2.42□□□□□ -2.02
LINC00393-201ENST00000443621 FAM58AQ8N1B3 248 aa2.42□□□□□ -2.02
LINC00393-201ENST00000443621 ZNF610Q8N9Z0 462 aa2.42□□□□□ -2.02
LINC00393-201ENST00000443621 WDR31Q8NA23 367 aa2.42□□□□□ -2.02
LINC00393-201ENST00000443621 Q8NA96 180 aa2.42□□□□□ -2.02
LINC00393-201ENST00000443621 POC1AQ8NBT0 407 aa2.42□□□□□ -2.02
LINC00393-201ENST00000443621 UXS1Q8NBZ7 420 aa2.42□□□□□ -2.02
LINC00393-201ENST00000443621 ZBTB34Q8NCN2 500 aa2.42□□□□□ -2.02
LINC00393-201ENST00000443621 TMEM104Q8NE00 496 aa2.42□□□□□ -2.02
LINC00393-201ENST00000443621 BEST4Q8NFU0 473 aa2.42□□□□□ -2.02
LINC00393-201ENST00000443621 OR10AD1Q8NGE0 317 aa2.42□□□□□ -2.02
LINC00393-201ENST00000443621 OR56B2PQ8NGI1 322 aa2.42□□□□□ -2.02
LINC00393-201ENST00000443621 OR4A4PQ8NGN8 299 aa2.42□□□□□ -2.02
LINC00393-201ENST00000443621 OR4K15Q8NH41 348 aa2.42□□□□□ -2.02
LINC00393-201ENST00000443621 PPP1R35Q8TAP8 253 aa2.42□□□□□ -2.02
LINC00393-201ENST00000443621 Q8TCH9 128 aa2.42□□□□□ -2.02
LINC00393-201ENST00000443621 KLF14Q8TD94 323 aaPredicted RBP2.42□□□□□ -2.02
LINC00393-201ENST00000443621 ZNF431Q8TF32 576 aaPredicted RBP2.42□□□□□ -2.02
LINC00393-201ENST00000443621 MITD1Q8WV92 249 aa2.42□□□□□ -2.02
LINC00393-201ENST00000443621 HPSE2Q8WWQ2 592 aa2.42□□□□□ -2.02
LINC00393-201ENST00000443621 PIGCQ92535 297 aa2.42□□□□□ -2.02
LINC00393-201ENST00000443621 RND1Q92730 232 aa2.42□□□□□ -2.02
LINC00393-201ENST00000443621 IL22RA2Q969J5 263 aa2.42□□□□□ -2.02
LINC00393-201ENST00000443621 ZNF775Q96BV0 537 aaPredicted RBP2.42□□□□□ -2.02
LINC00393-201ENST00000443621 ORAI1Q96D31 301 aa2.42□□□□□ -2.02
LINC00393-201ENST00000443621 DNAJA3Q96EY1 480 aa2.42□□□□□ -2.02
LINC00393-201ENST00000443621 PIK3IP1Q96FE7 263 aa2.42□□□□□ -2.02
LINC00393-201ENST00000443621 ABHD14BQ96IU4 210 aa2.42□□□□□ -2.02
LINC00393-201ENST00000443621 AKR1E2Q96JD6 320 aa2.42□□□□□ -2.02
LINC00393-201ENST00000443621 RNF170Q96K19 258 aa2.42□□□□□ -2.02
LINC00393-201ENST00000443621 DMRTA2Q96SC8 542 aa2.42□□□□□ -2.02
LINC00393-201ENST00000443621 PHB2Q99623 299 aa2.42□□□□□ -2.02
LINC00393-201ENST00000443621 CMSS1Q9BQ75 279 aaKnown RBP2.42□□□□□ -2.02
LINC00393-201ENST00000443621 NRIP2Q9BQI9 281 aa2.42□□□□□ -2.02
LINC00393-201ENST00000443621 GINS4Q9BRT9 223 aa2.42□□□□□ -2.02
LINC00393-201ENST00000443621 SUCNR1Q9BXA5 334 aa2.42□□□□□ -2.02
LINC00393-201ENST00000443621 NMES1Q9C002 83 aa2.42□□□□□ -2.02
LINC00393-201ENST00000443621 SELENOIQ9C0D9 397 aa2.42□□□□□ -2.02
LINC00393-201ENST00000443621 FAM234AQ9H0X4 552 aa2.42□□□□□ -2.02
LINC00393-201ENST00000443621 CXXC4Q9H2H0 198 aa2.42□□□□□ -2.02
LINC00393-201ENST00000443621 CLEC4MQ9H2X3 399 aaPredicted RBP2.42□□□□□ -2.02
LINC00393-201ENST00000443621 MS4A5Q9H3V2 200 aa2.42□□□□□ -2.02
LINC00393-201ENST00000443621 PRORYQ9H606 182 aa2.42□□□□□ -2.02
LINC00393-201ENST00000443621 SLA2Q9H6Q3 261 aa2.42□□□□□ -2.02
LINC00393-201ENST00000443621 ZNF286AQ9HBT8 521 aa2.42□□□□□ -2.02
LINC00393-201ENST00000443621 RAB18Q9NP72 206 aa2.42□□□□□ -2.02
LINC00393-201ENST00000443621 C12orf4Q9NQ89 552 aa2.42□□□□□ -2.02
LINC00393-201ENST00000443621 CA10Q9NS85 328 aa2.42□□□□□ -2.02
LINC00393-201ENST00000443621 MBNL3Q9NUK0 354 aaKnown RBP2.42□□□□□ -2.02
LINC00393-201ENST00000443621 TMEM100Q9NV29 134 aa2.42□□□□□ -2.02
LINC00393-201ENST00000443621 NECAP2Q9NVZ3 263 aa2.42□□□□□ -2.02
LINC00393-201ENST00000443621 PURGQ9UJV8 347 aaKnown RBP2.42□□□□□ -2.02
LINC00393-201ENST00000443621 PAIP2BQ9ULR5 123 aaKnown RBP2.42□□□□□ -2.02
LINC00393-201ENST00000443621 GAB2Q9UQC2 676 aa2.42□□□□□ -2.02
LINC00393-201ENST00000443621 OSGIN2Q9Y236 505 aa2.42□□□□□ -2.02
LINC00393-201ENST00000443621 ST3GAL6Q9Y274 331 aa2.42□□□□□ -2.02
LINC00393-201ENST00000443621 KCNIP3Q9Y2W7 256 aa2.42□□□□□ -2.02
LINC00393-201ENST00000443621 UBE2J1Q9Y385 318 aaPredicted RBP2.42□□□□□ -2.02
LINC00393-201ENST00000443621 WIPI2Q9Y4P8 454 aa2.42□□□□□ -2.02
LINC00393-201ENST00000443621 N6AMT1Q9Y5N5 214 aa2.42□□□□□ -2.02
LINC00393-201ENST00000443621 CSAG2Q9Y5P2 127 aa2.42□□□□□ -2.02
LINC00393-201ENST00000443621 ALG5Q9Y673 324 aa2.42□□□□□ -2.02
LINC00393-201ENST00000443621 ZFHX4Q86UP3 3567 aa2.42□□□□□ -2.02
LINC00393-201ENST00000443621 ZFHX2Q9C0A1 2572 aaPredicted RBP2.42□□□□□ -2.02
LINC00393-201ENST00000443621 RIF1Q5UIP0 2472 aaKnown RBP2.42□□□□□ -2.02
LINC00393-201ENST00000443621 FREM1Q5H8C1 2179 aa2.42□□□□□ -2.02
LINC00393-201ENST00000443621 CUL9Q8IWT3 2517 aa2.41□□□□□ -2.02
LINC00393-201ENST00000443621 MYO7BQ6PIF6 2116 aa2.41□□□□□ -2.02
LINC00393-201ENST00000443621 CNOT1A5YKK6 2376 aaKnown RBP2.41□□□□□ -2.02
LINC00393-201ENST00000443621 IGKV1-27A0A075B6S5 117 aa2.41□□□□□ -2.02
LINC00393-201ENST00000443621 A0A096LPE4 126 aa2.41□□□□□ -2.02
LINC00393-201ENST00000443621 TRBV6-7A0A0A0MS04 114 aa2.41□□□□□ -2.02
LINC00393-201ENST00000443621 A0A0A6YYD4 124 aa2.41□□□□□ -2.02
LINC00393-201ENST00000443621 A0A0B4J203 849 aa2.41□□□□□ -2.02
LINC00393-201ENST00000443621 A0A0B4J293 547 aa2.41□□□□□ -2.02
LINC00393-201ENST00000443621 IGHV2OR16-5A0A0B4J2B6 119 aa2.41□□□□□ -2.02
LINC00393-201ENST00000443621 IGHV1-18A0A0C4DH31 117 aa2.41□□□□□ -2.02
LINC00393-201ENST00000443621 A0A0D9SG52 128 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms