RNA–Protein interactions for RNA: ENST00000440097.5

LIMD1-202, Transcript of LIM domains containing 1, humanhuman

TSL 5 BASIC

Gene LIMD1, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-202ENST00000440097 PIGLQ9Y2B2 252 aa12.34□□□□□ -0.43
LIMD1-202ENST00000440097 MRPS28Q9Y2Q9 187 aaKnown RBP12.34□□□□□ -0.43
LIMD1-202ENST00000440097 NCOR2Q9Y618 2525 aa12.33□□□□□ -0.44
LIMD1-202ENST00000440097 TRBV23-1A0A0A0MS06 115 aa12.33□□□□□ -0.44
LIMD1-202ENST00000440097 SERPINF1P36955 418 aa12.33□□□□□ -0.44
LIMD1-202ENST00000440097 OR3A4PP47883 348 aa12.33□□□□□ -0.44
LIMD1-202ENST00000440097 RRADP55042 308 aa12.33□□□□□ -0.44
LIMD1-202ENST00000440097 F2RL1P55085 397 aa12.33□□□□□ -0.44
LIMD1-202ENST00000440097 CLDN18P56856 261 aa12.33□□□□□ -0.44
LIMD1-202ENST00000440097 NAAAQ02083 359 aa12.33□□□□□ -0.44
LIMD1-202ENST00000440097 TSPO2Q5TGU0 170 aa12.33□□□□□ -0.44
LIMD1-202ENST00000440097 MCEMP1Q8IX19 187 aa12.33□□□□□ -0.44
LIMD1-202ENST00000440097 TUSC5Q8IXB3 177 aa12.33□□□□□ -0.44
LIMD1-202ENST00000440097 ZSCAN4Q8NAM6 433 aaPredicted RBP12.33□□□□□ -0.44
LIMD1-202ENST00000440097 CLCC1Q96S66 551 aa12.33□□□□□ -0.44
LIMD1-202ENST00000440097 RNF126Q9BV68 326 aa12.33□□□□□ -0.44
LIMD1-202ENST00000440097 ELL3Q9HB65 397 aaPredicted RBP12.33□□□□□ -0.44
LIMD1-202ENST00000440097 LPAR3Q9UBY5 353 aa12.33□□□□□ -0.44
LIMD1-202ENST00000440097 MIOXQ9UGB7 285 aa12.33□□□□□ -0.44
LIMD1-202ENST00000440097 SVILO95425 2214 aa12.33□□□□□ -0.44
LIMD1-202ENST00000440097 DSPP15924 2871 aaKnown RBP12.33□□□□□ -0.44
LIMD1-202ENST00000440097 NME2P1O60361 137 aa12.33□□□□□ -0.44
LIMD1-202ENST00000440097 DHRS3O75911 302 aa12.33□□□□□ -0.44
LIMD1-202ENST00000440097 MPIG6BO95866 241 aa12.33□□□□□ -0.44
LIMD1-202ENST00000440097 VSIG8P0DPA2 414 aa12.33□□□□□ -0.44
LIMD1-202ENST00000440097 ZNF44P15621 663 aa12.33□□□□□ -0.44
LIMD1-202ENST00000440097 NME2P22392 152 aa12.33□□□□□ -0.44
LIMD1-202ENST00000440097 AKR1C3P42330 323 aa12.33□□□□□ -0.44
LIMD1-202ENST00000440097 HAAOP46952 286 aa12.33□□□□□ -0.44
LIMD1-202ENST00000440097 MEF2DQ14814 521 aa12.33□□□□□ -0.44
LIMD1-202ENST00000440097 SLC10A1Q14973 349 aa12.33□□□□□ -0.44
LIMD1-202ENST00000440097 RAB35Q15286 201 aa12.33□□□□□ -0.44
LIMD1-202ENST00000440097 SNAI3Q3KNW1 292 aa12.33□□□□□ -0.44
LIMD1-202ENST00000440097 OR52W1Q6IF63 320 aa12.33□□□□□ -0.44
LIMD1-202ENST00000440097 DTX1Q86Y01 620 aa12.33□□□□□ -0.44
LIMD1-202ENST00000440097 OR14K1Q8NGZ2 314 aa12.33□□□□□ -0.44
LIMD1-202ENST00000440097 LYZL4Q96KX0 146 aa12.33□□□□□ -0.44
LIMD1-202ENST00000440097 OR10A2Q9H208 303 aa12.33□□□□□ -0.44
LIMD1-202ENST00000440097 GPR35Q9HC97 309 aa12.33□□□□□ -0.44
LIMD1-202ENST00000440097 SMCO4Q9NRQ5 59 aa12.33□□□□□ -0.44
LIMD1-202ENST00000440097 A0A1W2PPE3 182 aa12.32□□□□□ -0.44
LIMD1-202ENST00000440097 BPNT1O95861 308 aa12.32□□□□□ -0.44
LIMD1-202ENST00000440097 CTSSP25774 331 aa12.32□□□□□ -0.44
LIMD1-202ENST00000440097 UNC119Q13432 240 aa12.32□□□□□ -0.44
LIMD1-202ENST00000440097 PNLIPRP3Q17RR3 467 aa12.32□□□□□ -0.44
LIMD1-202ENST00000440097 RSPO1Q2MKA7 263 aaPredicted RBP12.32□□□□□ -0.44
LIMD1-202ENST00000440097 SLC22A6Q4U2R8 563 aa12.32□□□□□ -0.44
LIMD1-202ENST00000440097 GVQW1Q8N7I0 195 aa12.32□□□□□ -0.44
LIMD1-202ENST00000440097 PNLDC1Q8NA58 520 aaKnown RBP12.32□□□□□ -0.44
LIMD1-202ENST00000440097 OR1F12Q8NHA8 337 aa12.32□□□□□ -0.44
LIMD1-202ENST00000440097 NUDCD2Q8WVJ2 157 aa12.32□□□□□ -0.44
LIMD1-202ENST00000440097 BANF2Q9H503 90 aa12.32□□□□□ -0.44
LIMD1-202ENST00000440097 RHBDD3Q9Y3P4 386 aa12.32□□□□□ -0.44
LIMD1-202ENST00000440097 FREM1Q5H8C1 2179 aa12.32□□□□□ -0.44
LIMD1-202ENST00000440097 A0A096LPE4 126 aa12.32□□□□□ -0.44
LIMD1-202ENST00000440097 A0A1W2PPZ6 126 aa12.32□□□□□ -0.44
LIMD1-202ENST00000440097 MSGN1A6NI15 193 aa12.32□□□□□ -0.44
LIMD1-202ENST00000440097 RNASEK-C17orf49H0YIS7 233 aa12.32□□□□□ -0.44
LIMD1-202ENST00000440097 H0YIZ8 118 aa12.32□□□□□ -0.44
LIMD1-202ENST00000440097 CST2P09228 141 aa12.32□□□□□ -0.44
LIMD1-202ENST00000440097 ZNF708P17019 499 aa12.32□□□□□ -0.44
LIMD1-202ENST00000440097 CAV2P51636 162 aa12.32□□□□□ -0.44
LIMD1-202ENST00000440097 ZNF766Q5HY98 468 aa12.32□□□□□ -0.44
LIMD1-202ENST00000440097 RTN4RL2Q86UN3 420 aa12.32□□□□□ -0.44
LIMD1-202ENST00000440097 FJX1Q86VR8 437 aa12.32□□□□□ -0.44
LIMD1-202ENST00000440097 LYPD6Q86Y78 171 aa12.32□□□□□ -0.44
LIMD1-202ENST00000440097 OR5AS1Q8N127 324 aa12.32□□□□□ -0.44
LIMD1-202ENST00000440097 MICU1Q9BPX6 476 aa12.32□□□□□ -0.44
LIMD1-202ENST00000440097 OR51M1Q9H341 326 aa12.32□□□□□ -0.44
LIMD1-202ENST00000440097 SEBOXQ9HB31 216 aaPredicted RBP12.32□□□□□ -0.44
LIMD1-202ENST00000440097 OR2S2Q9NQN1 319 aa12.32□□□□□ -0.44
LIMD1-202ENST00000440097 SLC2A8Q9NY64 477 aa12.32□□□□□ -0.44
LIMD1-202ENST00000440097 GHRLQ9UBU3 117 aa12.32□□□□□ -0.44
LIMD1-202ENST00000440097 TIMM10BQ9Y5J6 103 aa12.32□□□□□ -0.44
LIMD1-202ENST00000440097 SMG1Q96Q15 3661 aaKnown RBP12.31□□□□□ -0.44
LIMD1-202ENST00000440097 LDLRAD4O15165 306 aa12.31□□□□□ -0.44
LIMD1-202ENST00000440097 CRTAPO75718 401 aaPredicted RBP12.31□□□□□ -0.44
LIMD1-202ENST00000440097 CCL1P22362 96 aa12.31□□□□□ -0.44
LIMD1-202ENST00000440097 CCNOP22674 350 aa12.31□□□□□ -0.44
LIMD1-202ENST00000440097 CD82P27701 267 aa12.31□□□□□ -0.44
LIMD1-202ENST00000440097 HIST1H3AP68431 136 aa12.31□□□□□ -0.44
LIMD1-202ENST00000440097 HIST2H3PS2Q5TEC6 136 aa12.31□□□□□ -0.44
LIMD1-202ENST00000440097 ZNF585AQ6P3V2 769 aa12.31□□□□□ -0.44
LIMD1-202ENST00000440097 DRAM2Q6UX65 266 aa12.31□□□□□ -0.44
LIMD1-202ENST00000440097 HIST2H3AQ71DI3 136 aa12.31□□□□□ -0.44
LIMD1-202ENST00000440097 TRAPPC6BQ86SZ2 158 aa12.31□□□□□ -0.44
LIMD1-202ENST00000440097 C15orf54Q8N8G6 183 aa12.31□□□□□ -0.44
LIMD1-202ENST00000440097 ZDHHC22Q8N966 263 aa12.31□□□□□ -0.44
LIMD1-202ENST00000440097 MDS2Q8NDY4 140 aa12.31□□□□□ -0.44
LIMD1-202ENST00000440097 HIST1H2BAQ96A08 127 aa12.31□□□□□ -0.44
LIMD1-202ENST00000440097 S100A13Q99584 98 aa12.31□□□□□ -0.44
LIMD1-202ENST00000440097 SLC7A10Q9NS82 523 aa12.31□□□□□ -0.44
LIMD1-202ENST00000440097 ZNF107Q9UII5 783 aaPredicted RBP12.31□□□□□ -0.44
LIMD1-202ENST00000440097 TRBV6-7A0A0A0MS04 114 aa12.31□□□□□ -0.44
LIMD1-202ENST00000440097 A0A0U1RQV5 110 aa12.31□□□□□ -0.44
LIMD1-202ENST00000440097 WIPF3A6NGB9 483 aa12.31□□□□□ -0.44
LIMD1-202ENST00000440097 AGPAT2O15120 278 aa12.31□□□□□ -0.44
LIMD1-202ENST00000440097 EFSO43281 561 aa12.31□□□□□ -0.44
LIMD1-202ENST00000440097 RAB6AP20340 208 aa12.31□□□□□ -0.44
LIMD1-202ENST00000440097 PCBD1P61457 104 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms