RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 KIR2DL4Q99706 377 aa2.9□□□□□ -1.95
HMGB1P12-201ENST00000438594 MARVELD1Q9BSK0 173 aa2.9□□□□□ -1.95
HMGB1P12-201ENST00000438594 GGACTQ9BVM4 153 aa2.9□□□□□ -1.95
HMGB1P12-201ENST00000438594 TM2D1Q9BX74 207 aa2.9□□□□□ -1.95
HMGB1P12-201ENST00000438594 PLAC1Q9HBJ0 212 aa2.9□□□□□ -1.95
HMGB1P12-201ENST00000438594 KCNJ16Q9NPI9 418 aa2.9□□□□□ -1.95
HMGB1P12-201ENST00000438594 TAS2R5Q9NYW4 299 aa2.9□□□□□ -1.95
HMGB1P12-201ENST00000438594 DOK5Q9P104 306 aa2.9□□□□□ -1.95
HMGB1P12-201ENST00000438594 VAX2Q9UIW0 290 aa2.9□□□□□ -1.95
HMGB1P12-201ENST00000438594 RAB22AQ9UL26 194 aa2.9□□□□□ -1.95
HMGB1P12-201ENST00000438594 ST3GAL6Q9Y274 331 aa2.9□□□□□ -1.95
HMGB1P12-201ENST00000438594 USP6P35125 1406 aa2.9□□□□□ -1.95
HMGB1P12-201ENST00000438594 NCOA1Q15788 1441 aa2.9□□□□□ -1.95
HMGB1P12-201ENST00000438594 CEP164Q9UPV0 1460 aa2.9□□□□□ -1.95
HMGB1P12-201ENST00000438594 A0A1B0GVG6 124 aa2.89□□□□□ -1.95
HMGB1P12-201ENST00000438594 C9orf170A2RU37 121 aa2.89□□□□□ -1.95
HMGB1P12-201ENST00000438594 LINC01553A4QN01 128 aa2.89□□□□□ -1.95
HMGB1P12-201ENST00000438594 ZNF726A6NNF4 738 aa2.89□□□□□ -1.95
HMGB1P12-201ENST00000438594 B4DXG7 233 aa2.89□□□□□ -1.95
HMGB1P12-201ENST00000438594 LINC01619G3V211 115 aa2.89□□□□□ -1.95
HMGB1P12-201ENST00000438594 H7C1H1 209 aa2.89□□□□□ -1.95
HMGB1P12-201ENST00000438594 LINC01565O15544 149 aa2.89□□□□□ -1.95
HMGB1P12-201ENST00000438594 ORC5O43913 435 aa2.89□□□□□ -1.95
HMGB1P12-201ENST00000438594 FRAT2O75474 233 aaPredicted RBP2.89□□□□□ -1.95
HMGB1P12-201ENST00000438594 SERPINB7O75635 380 aa2.89□□□□□ -1.95
HMGB1P12-201ENST00000438594 NUDT14O95848 222 aa2.89□□□□□ -1.95
HMGB1P12-201ENST00000438594 PDYNP01213 254 aa2.89□□□□□ -1.95
HMGB1P12-201ENST00000438594 IGHV3-9P01782 118 aa2.89□□□□□ -1.95
HMGB1P12-201ENST00000438594 C1QCP02747 245 aa2.89□□□□□ -1.95
HMGB1P12-201ENST00000438594 BPGMP07738 259 aa2.89□□□□□ -1.95
HMGB1P12-201ENST00000438594 GABRA1P14867 456 aa2.89□□□□□ -1.95
HMGB1P12-201ENST00000438594 LIFP15018 202 aa2.89□□□□□ -1.95
HMGB1P12-201ENST00000438594 GGT1P19440 569 aa2.89□□□□□ -1.95
HMGB1P12-201ENST00000438594 KRTAP5-9P26371 169 aa2.89□□□□□ -1.95
HMGB1P12-201ENST00000438594 SDC4P31431 198 aa2.89□□□□□ -1.95
HMGB1P12-201ENST00000438594 PFN2P35080 140 aa2.89□□□□□ -1.95
HMGB1P12-201ENST00000438594 RCVRNP35243 200 aa2.89□□□□□ -1.95
HMGB1P12-201ENST00000438594 TALDO1P37837 337 aa2.89□□□□□ -1.95
HMGB1P12-201ENST00000438594 CDKN2BP42772 138 aa2.89□□□□□ -1.95
HMGB1P12-201ENST00000438594 MAP2K4P45985 399 aa2.89□□□□□ -1.95
HMGB1P12-201ENST00000438594 CRYBA2P53672 197 aa2.89□□□□□ -1.95
HMGB1P12-201ENST00000438594 TPI1P60174 286 aa2.89□□□□□ -1.95
HMGB1P12-201ENST00000438594 LMO4P61968 165 aa2.89□□□□□ -1.95
HMGB1P12-201ENST00000438594 ELF3P78545 371 aaPredicted RBP2.89□□□□□ -1.95
HMGB1P12-201ENST00000438594 MXD1Q05195 221 aa2.89□□□□□ -1.95
HMGB1P12-201ENST00000438594 IHHQ14623 411 aa2.89□□□□□ -1.95
HMGB1P12-201ENST00000438594 NSDHLQ15738 373 aa2.89□□□□□ -1.95
HMGB1P12-201ENST00000438594 TAB1Q15750 504 aa2.89□□□□□ -1.95
HMGB1P12-201ENST00000438594 C14orf28Q4W4Y0 310 aa2.89□□□□□ -1.95
HMGB1P12-201ENST00000438594 TCTEX1D4Q5JR98 221 aa2.89□□□□□ -1.95
HMGB1P12-201ENST00000438594 CLEC12AQ5QGZ9 265 aa2.89□□□□□ -1.95
HMGB1P12-201ENST00000438594 C9orf64Q5T6V5 341 aa2.89□□□□□ -1.95
HMGB1P12-201ENST00000438594 HENMT1Q5T8I9 393 aaKnown RBP2.89□□□□□ -1.95
HMGB1P12-201ENST00000438594 OTUD1Q5VV17 481 aaPredicted RBP2.89□□□□□ -1.95
HMGB1P12-201ENST00000438594 SAMD13Q5VXD3 122 aa2.89□□□□□ -1.95
HMGB1P12-201ENST00000438594 OPN5Q6U736 354 aa2.89□□□□□ -1.95
HMGB1P12-201ENST00000438594 IGFL2Q6UWQ7 119 aa2.89□□□□□ -1.95
HMGB1P12-201ENST00000438594 FAM183BPQ6ZVS7 135 aa2.89□□□□□ -1.95
HMGB1P12-201ENST00000438594 OAFQ86UD1 273 aa2.89□□□□□ -1.95
HMGB1P12-201ENST00000438594 CALHM3Q86XJ0 350 aa2.89□□□□□ -1.95
HMGB1P12-201ENST00000438594 ZNF567Q8N184 647 aa2.89□□□□□ -1.95
HMGB1P12-201ENST00000438594 C1orf158Q8N1D5 194 aa2.89□□□□□ -1.95
HMGB1P12-201ENST00000438594 FTMTQ8N4E7 242 aa2.89□□□□□ -1.95
HMGB1P12-201ENST00000438594 ZNF491Q8N8L2 437 aa2.89□□□□□ -1.95
HMGB1P12-201ENST00000438594 OR9Q1Q8NGQ5 310 aa2.89□□□□□ -1.95
HMGB1P12-201ENST00000438594 OR5J2Q8NH18 312 aa2.89□□□□□ -1.95
HMGB1P12-201ENST00000438594 OR4K15Q8NH41 348 aa2.89□□□□□ -1.95
HMGB1P12-201ENST00000438594 ZNRF4Q8WWF5 429 aa2.89□□□□□ -1.95
HMGB1P12-201ENST00000438594 RGP1Q92546 391 aaPredicted RBP2.89□□□□□ -1.95
HMGB1P12-201ENST00000438594 TMEM230Q96A57 120 aa2.89□□□□□ -1.95
HMGB1P12-201ENST00000438594 PIK3IP1Q96FE7 263 aa2.89□□□□□ -1.95
HMGB1P12-201ENST00000438594 PDXPQ96GD0 296 aa2.89□□□□□ -1.95
HMGB1P12-201ENST00000438594 DNAJC30Q96LL9 226 aa2.89□□□□□ -1.95
HMGB1P12-201ENST00000438594 FAM19A4Q96LR4 140 aa2.89□□□□□ -1.95
HMGB1P12-201ENST00000438594 BIRC8Q96P09 236 aa2.89□□□□□ -1.95
HMGB1P12-201ENST00000438594 VPS25Q9BRG1 176 aa2.89□□□□□ -1.95
HMGB1P12-201ENST00000438594 RHNO1Q9BSD3 238 aa2.89□□□□□ -1.95
HMGB1P12-201ENST00000438594 RTBDNQ9BSG5 229 aaPredicted RBP2.89□□□□□ -1.95
HMGB1P12-201ENST00000438594 FAAP24Q9BTP7 215 aa2.89□□□□□ -1.95
HMGB1P12-201ENST00000438594 C1orf50Q9BV19 199 aa2.89□□□□□ -1.95
HMGB1P12-201ENST00000438594 EMC6Q9BV81 110 aa2.89□□□□□ -1.95
HMGB1P12-201ENST00000438594 CHST5Q9GZS9 411 aa2.89□□□□□ -1.95
HMGB1P12-201ENST00000438594 LIME1Q9H400 295 aa2.89□□□□□ -1.95
HMGB1P12-201ENST00000438594 POLR1DQ9Y2S0 133 aa2.89□□□□□ -1.95
HMGB1P12-201ENST00000438594 CC2D2AQ9P2K1 1620 aa2.89□□□□□ -1.95
HMGB1P12-201ENST00000438594 GOLGA3Q08378 1498 aa2.89□□□□□ -1.95
HMGB1P12-201ENST00000438594 CLUHO75153 1309 aa2.89□□□□□ -1.95
HMGB1P12-201ENST00000438594 TRIP12Q14669 1992 aaPredicted RBP2.89□□□□□ -1.95
HMGB1P12-201ENST00000438594 ADAMTSL3P82987 1691 aa2.88□□□□□ -1.95
HMGB1P12-201ENST00000438594 CFAP43Q8NDM7 1665 aa2.88□□□□□ -1.95
HMGB1P12-201ENST00000438594 MAP3K1Q13233 1512 aa2.88□□□□□ -1.95
HMGB1P12-201ENST00000438594 DNMBPQ6XZF7 1577 aa2.88□□□□□ -1.95
HMGB1P12-201ENST00000438594 LAMC3Q9Y6N6 1575 aa2.88□□□□□ -1.95
HMGB1P12-201ENST00000438594 PPIP5K1Q6PFW1 1433 aa2.88□□□□□ -1.95
HMGB1P12-201ENST00000438594 IGLV5-52A0A0A0MRZ9 124 aa2.88□□□□□ -1.95
HMGB1P12-201ENST00000438594 IGHV4-61A0A0C4DH41 118 aa2.88□□□□□ -1.95
HMGB1P12-201ENST00000438594 TMEM272A0A1B0GTI8 110 aa2.88□□□□□ -1.95
HMGB1P12-201ENST00000438594 A0A1B0GVT2 93 aa2.88□□□□□ -1.95
HMGB1P12-201ENST00000438594 SLC17A3O00476 420 aa2.88□□□□□ -1.95
HMGB1P12-201ENST00000438594 FGF17O60258 216 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms