RNA–Protein interactions for RNA: ENST00000435145.6

HLA-DQB2-231, Transcript of major histocompatibility complex, class II, DQ beta 2, human

BASIC

Gene HLA-DQB2, Length 2,026 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HLA-DQB2-231	ENST00000435145	FBXL14	Q8N1E6	418 aa		13.92	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	SVBP	Q8N300	66 aa		13.92	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	MARS2	Q96GW9	593 aa	Known RBP	13.92	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	C1QTNF5	Q9BXJ0	243 aa		13.92	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	ZNF629	Q9UEG4	869 aa	Predicted RBP	13.92	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	ATPIF1	Q9UII2	106 aa		13.92	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	PURG	Q9UJV8	347 aa	Known RBP	13.92	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	IGKV3D-15	A0A087WSY6	115 aa		13.91	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	ZNF705E	A8MWA4	302 aa	Predicted RBP	13.91	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	XRCC2	O43543	280 aa		13.91	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	TRAPPC6A	O75865	159 aa		13.91	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	H2AFB1	P0C5Y9	115 aa		13.91	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	ZNF728	P0DKX0	622 aa		13.91	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	EDN3	P14138	238 aa		13.91	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	TCN2	P20062	427 aa		13.91	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	RPL12	P30050	165 aa	Known RBP	13.91	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	PIGP	P57054	158 aa		13.91	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	EIF5AL1	Q6IS14	154 aa	Known RBP	13.91	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	C6orf15	Q6UXA7	325 aa	Predicted RBP	13.91	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145		Q8NFD4	153 aa		13.91	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	TSNAX	Q99598	290 aa	Known RBP	13.91	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	PRDM14	Q9GZV8	571 aa		13.91	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	NAA60	Q9H7X0	242 aa		13.91	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	ZC4H2	Q9NQZ6	224 aa		13.91	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	AMDHD2	Q9Y303	409 aa		13.91	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	ZNF816-ZNF321P	A0A0X1KG74	233 aa		13.91	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	ZNF850	A8MQ14	1090 aa		13.91	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	GPR31	O00270	319 aa		13.91	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	PDCD6	O75340	191 aa		13.91	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	CST4	P01036	141 aa		13.91	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	IFNA21	P01568	189 aa		13.91	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	CYB561	P49447	251 aa		13.91	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	AKR1C2	P52895	323 aa		13.91	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	AKR1C1	Q04828	323 aa		13.91	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	OR2A2	Q6IF42	318 aa		13.91	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145		Q6ZPA2	131 aa		13.91	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	OR5T2	Q8NGG2	359 aa		13.91	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	ABHD3	Q8WU67	409 aa		13.91	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	ZNF845	Q96IR2	970 aa	Predicted RBP	13.91	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	PRRX2	Q99811	253 aa		13.91	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	OR2S2	Q9NQN1	319 aa		13.91	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	SLC7A11	Q9UPY5	501 aa		13.91	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	LOXL2	Q9Y4K0	774 aa		13.91	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	LINC01387	J3KSC0	135 aa		13.9	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	LRP3	O75074	770 aa		13.9	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	GDF1	P27539	372 aa		13.9	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	SULT1A2	P50226	295 aa		13.9	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	UCP3	P55916	312 aa		13.9	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	RBM11	P57052	281 aa	Known RBP	13.9	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	GUCA2B	Q16661	112 aa		13.9	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	DYRK2	Q92630	601 aa		13.9	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	AIFM2	Q9BRQ8	373 aa		13.9	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	SPRY4	Q9C004	299 aa		13.9	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	TAF9B	Q9HBM6	251 aa		13.9	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	PRDM6	Q9NQX0	595 aa		13.9	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	P4HTM	Q9NXG6	502 aa		13.9	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	ST3GAL6	Q9Y274	331 aa		13.9	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	CFAP54	Q96N23	3096 aa		13.9	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	ZNF587B	E7ETH6	402 aa		13.9	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	ATP6V1G2-DDX39B	F2Z307	99 aa		13.9	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145		K7EPK0	472 aa		13.9	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	DBX2	Q6ZNG2	339 aa		13.9	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	FAM71E2	Q8N5Q1	922 aa		13.9	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	CPEB3	Q8NE35	698 aa	Known RBP	13.9	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	RTN4IP1	Q8WWV3	396 aa	Predicted RBP	13.9	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	MOB3A	Q96BX8	217 aa		13.9	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	SUCNR1	Q9BXA5	334 aa		13.9	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	LINC00470	Q9BZP3	86 aa		13.9	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	PCDHB16	Q9NRJ7	776 aa		13.9	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145	KCNIP3	Q9Y2W7	256 aa		13.9	□□□□□ -0.18
HLA-DQB2-231	ENST00000435145		H7C1Q1	480 aa		13.89	□□□□□ -0.19
HLA-DQB2-231	ENST00000435145	TPD52L2	O43399	206 aa	Known RBP	13.89	□□□□□ -0.19
HLA-DQB2-231	ENST00000435145	RCC1	P18754	421 aa	Predicted RBP	13.89	□□□□□ -0.19
HLA-DQB2-231	ENST00000435145	FCGR2C	P31995	323 aa		13.89	□□□□□ -0.19
HLA-DQB2-231	ENST00000435145	LPAR6	P43657	344 aa		13.89	□□□□□ -0.19
HLA-DQB2-231	ENST00000435145	SMCO1	Q147U7	214 aa		13.89	□□□□□ -0.19
HLA-DQB2-231	ENST00000435145	TSPO2	Q5TGU0	170 aa		13.89	□□□□□ -0.19
HLA-DQB2-231	ENST00000435145	PLCXD3	Q63HM9	321 aa		13.89	□□□□□ -0.19
HLA-DQB2-231	ENST00000435145	TMEM211	Q6ICI0	200 aa		13.89	□□□□□ -0.19
HLA-DQB2-231	ENST00000435145	SLC22A25	Q6T423	547 aa		13.89	□□□□□ -0.19
HLA-DQB2-231	ENST00000435145	LDLRAD3	Q86YD5	345 aa		13.89	□□□□□ -0.19
HLA-DQB2-231	ENST00000435145	C18orf12	Q96KH6	178 aa		13.89	□□□□□ -0.19
HLA-DQB2-231	ENST00000435145	ZPBP	Q9BS86	351 aa		13.89	□□□□□ -0.19
HLA-DQB2-231	ENST00000435145	SEC11C	Q9BY50	192 aa		13.89	□□□□□ -0.19
HLA-DQB2-231	ENST00000435145	ARV1	Q9H2C2	271 aa		13.89	□□□□□ -0.19
HLA-DQB2-231	ENST00000435145	PLEKHA2	Q9HB19	425 aa		13.89	□□□□□ -0.19
HLA-DQB2-231	ENST00000435145	ZNF286A	Q9HBT8	521 aa		13.89	□□□□□ -0.19
HLA-DQB2-231	ENST00000435145	PLA2G2E	Q9NZK7	142 aa		13.89	□□□□□ -0.19
HLA-DQB2-231	ENST00000435145	FBXL17	Q9UF56	701 aa		13.89	□□□□□ -0.19
HLA-DQB2-231	ENST00000435145	COLQ	Q9Y215	455 aa	Predicted RBP	13.89	□□□□□ -0.19
HLA-DQB2-231	ENST00000435145	JTB	O76095	146 aa		13.88	□□□□□ -0.19
HLA-DQB2-231	ENST00000435145	FARS2	O95363	451 aa	Known RBP	13.88	□□□□□ -0.19
HLA-DQB2-231	ENST00000435145	OR5AC1	P0C628	307 aa		13.88	□□□□□ -0.19
HLA-DQB2-231	ENST00000435145	CAV2	P51636	162 aa		13.88	□□□□□ -0.19
HLA-DQB2-231	ENST00000435145	MALL	Q13021	153 aa		13.88	□□□□□ -0.19
HLA-DQB2-231	ENST00000435145	ZC3HAV1	Q7Z2W4	902 aa	Known RBP	13.88	□□□□□ -0.19
HLA-DQB2-231	ENST00000435145	CALHM1	Q8IU99	346 aa		13.88	□□□□□ -0.19
HLA-DQB2-231	ENST00000435145	C1orf210	Q8IVY1	113 aa		13.88	□□□□□ -0.19
HLA-DQB2-231	ENST00000435145	FOXRED2	Q8IWF2	684 aa		13.88	□□□□□ -0.19
HLA-DQB2-231	ENST00000435145	TOMM40L	Q969M1	308 aa		13.88	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 33 ms