RNA–Protein interactions for RNA: ENST00000433822.1

COL17A1-204, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-204ENST00000433822 PDCD10Q9BUL8 212 aa6.46□□□□□ -1.38
COL17A1-204ENST00000433822 SRXN1Q9BYN0 137 aa6.46□□□□□ -1.38
COL17A1-204ENST00000433822 KRTAP17-1Q9BYP8 105 aa6.46□□□□□ -1.38
COL17A1-204ENST00000433822 METTL9Q9H1A3 318 aa6.46□□□□□ -1.38
COL17A1-204ENST00000433822 PPA2Q9H2U2 334 aa6.46□□□□□ -1.38
COL17A1-204ENST00000433822 C5orf66Q9H5L9 145 aa6.46□□□□□ -1.38
COL17A1-204ENST00000433822 CHMP1AQ9HD42 196 aaPredicted RBP6.46□□□□□ -1.38
COL17A1-204ENST00000433822 MEMO1Q9Y316 297 aa6.46□□□□□ -1.38
COL17A1-204ENST00000433822 TIMM10BQ9Y5J6 103 aa6.46□□□□□ -1.38
COL17A1-204ENST00000433822 COL12A1Q99715 3063 aa6.46□□□□□ -1.38
COL17A1-204ENST00000433822 MYO9AB2RTY4 2548 aa6.45□□□□□ -1.38
COL17A1-204ENST00000433822 hCG_38984A0A1B0GV85 526 aa6.45□□□□□ -1.38
COL17A1-204ENST00000433822 RAB19A4D1S5 217 aa6.45□□□□□ -1.38
COL17A1-204ENST00000433822 OR5H15A6NDH6 313 aa6.45□□□□□ -1.38
COL17A1-204ENST00000433822 ZNF724A8MTY0 619 aa6.45□□□□□ -1.38
COL17A1-204ENST00000433822 F5H5K5 113 aa6.45□□□□□ -1.38
COL17A1-204ENST00000433822 STMND1H3BQB6 276 aa6.45□□□□□ -1.38
COL17A1-204ENST00000433822 TNFSF11O14788 317 aa6.45□□□□□ -1.38
COL17A1-204ENST00000433822 TAAR5O14804 337 aa6.45□□□□□ -1.38
COL17A1-204ENST00000433822 FARS2O95363 451 aaKnown RBP6.45□□□□□ -1.38
COL17A1-204ENST00000433822 PRB1P04280 392 aa6.45□□□□□ -1.38
COL17A1-204ENST00000433822 HPNP05981 417 aa6.45□□□□□ -1.38
COL17A1-204ENST00000433822 CTSDP07339 412 aaPredicted RBP6.45□□□□□ -1.38
COL17A1-204ENST00000433822 FCGR2AP12318 317 aa6.45□□□□□ -1.38
COL17A1-204ENST00000433822 RPS2P15880 293 aaKnown RBP6.45□□□□□ -1.38
COL17A1-204ENST00000433822 KLK2P20151 261 aa6.45□□□□□ -1.38
COL17A1-204ENST00000433822 BLVRBP30043 206 aaPredicted RBP6.45□□□□□ -1.38
COL17A1-204ENST00000433822 NUP62P37198 522 aaPredicted RBP6.45□□□□□ -1.38
COL17A1-204ENST00000433822 RBP2P50120 134 aa6.45□□□□□ -1.38
COL17A1-204ENST00000433822 FUT6P51993 359 aa6.45□□□□□ -1.38
COL17A1-204ENST00000433822 SNU13P55769 128 aaKnown RBP6.45□□□□□ -1.38
COL17A1-204ENST00000433822 UCP3P55916 312 aa6.45□□□□□ -1.38
COL17A1-204ENST00000433822 FOXO1Q12778 655 aa6.45□□□□□ -1.38
COL17A1-204ENST00000433822 HYAL4Q2M3T9 481 aa6.45□□□□□ -1.38
COL17A1-204ENST00000433822 SLC22A6Q4U2R8 563 aa6.45□□□□□ -1.38
COL17A1-204ENST00000433822 PAN3Q58A45 887 aaKnown RBP6.45□□□□□ -1.38
COL17A1-204ENST00000433822 CDCP2Q5VXM1 449 aa6.45□□□□□ -1.38
COL17A1-204ENST00000433822 PRSS54Q6PEW0 395 aa6.45□□□□□ -1.38
COL17A1-204ENST00000433822 DHRS11Q6UWP2 260 aa6.45□□□□□ -1.38
COL17A1-204ENST00000433822 ALKAL2Q6UX46 152 aa6.45□□□□□ -1.38
COL17A1-204ENST00000433822 BVESQ8NE79 360 aa6.45□□□□□ -1.38
COL17A1-204ENST00000433822 OR14L1PQ8NHC6 308 aa6.45□□□□□ -1.38
COL17A1-204ENST00000433822 MARCH1Q8TCQ1 289 aa6.45□□□□□ -1.38
COL17A1-204ENST00000433822 CT55Q8WUE5 264 aa6.45□□□□□ -1.38
COL17A1-204ENST00000433822 PSMF1Q92530 271 aa6.45□□□□□ -1.38
COL17A1-204ENST00000433822 TMEM230Q96A57 120 aa6.45□□□□□ -1.38
COL17A1-204ENST00000433822 SGK3Q96BR1 496 aa6.45□□□□□ -1.38
COL17A1-204ENST00000433822 GALNT14Q96FL9 552 aa6.45□□□□□ -1.38
COL17A1-204ENST00000433822 ARPC5LQ9BPX5 153 aa6.45□□□□□ -1.38
COL17A1-204ENST00000433822 SOX7Q9BT81 388 aa6.45□□□□□ -1.38
COL17A1-204ENST00000433822 RBM24Q9BX46 236 aaKnown RBP6.45□□□□□ -1.38
COL17A1-204ENST00000433822 C1QTNF5Q9BXJ0 243 aa6.45□□□□□ -1.38
COL17A1-204ENST00000433822 OR2H1Q9GZK4 316 aa6.45□□□□□ -1.38
COL17A1-204ENST00000433822 SHARPINQ9H0F6 387 aa6.45□□□□□ -1.38
COL17A1-204ENST00000433822 PIGMQ9H3S5 423 aa6.45□□□□□ -1.38
COL17A1-204ENST00000433822 FN3KRPQ9HA64 309 aa6.45□□□□□ -1.38
COL17A1-204ENST00000433822 GP6Q9HCN6 339 aa6.45□□□□□ -1.38
COL17A1-204ENST00000433822 FSCN3Q9NQT6 498 aa6.45□□□□□ -1.38
COL17A1-204ENST00000433822 ZFP57Q9NU63 452 aa6.45□□□□□ -1.38
COL17A1-204ENST00000433822 TMEM100Q9NV29 134 aa6.45□□□□□ -1.38
COL17A1-204ENST00000433822 PARPBPQ9NWS1 579 aa6.45□□□□□ -1.38
COL17A1-204ENST00000433822 ABI3Q9P2A4 366 aa6.45□□□□□ -1.38
COL17A1-204ENST00000433822 B4GALT7Q9UBV7 327 aa6.45□□□□□ -1.38
COL17A1-204ENST00000433822 PIGLQ9Y2B2 252 aa6.45□□□□□ -1.38
COL17A1-204ENST00000433822 LOXL2Q9Y4K0 774 aa6.45□□□□□ -1.38
COL17A1-204ENST00000433822 URB1O60287 2271 aaKnown RBP6.45□□□□□ -1.38
COL17A1-204ENST00000433822 DOPEY2Q9Y3R5 2298 aa6.45□□□□□ -1.38
COL17A1-204ENST00000433822 TNRC6AQ8NDV7 1962 aaKnown RBP6.44□□□□□ -1.38
COL17A1-204ENST00000433822 CCDC187A0A096LP49 1063 aa6.44□□□□□ -1.38
COL17A1-204ENST00000433822 PIGBOS1A0A0B4J2F0 54 aa6.44□□□□□ -1.38
COL17A1-204ENST00000433822 ZNF816-ZNF321PA0A0X1KG74 233 aa6.44□□□□□ -1.38
COL17A1-204ENST00000433822 PATE3B3GLJ2 98 aa6.44□□□□□ -1.38
COL17A1-204ENST00000433822 E9PLN8 166 aa6.44□□□□□ -1.38
COL17A1-204ENST00000433822 TEX46H3BTG2 121 aa6.44□□□□□ -1.38
COL17A1-204ENST00000433822 FGF16O43320 207 aa6.44□□□□□ -1.38
COL17A1-204ENST00000433822 RAD51DO75771 328 aa6.44□□□□□ -1.38
COL17A1-204ENST00000433822 PMP2P02689 132 aa6.44□□□□□ -1.38
COL17A1-204ENST00000433822 CSTBP04080 98 aaKnown RBP6.44□□□□□ -1.38
COL17A1-204ENST00000433822 RLN2P04090 185 aa6.44□□□□□ -1.38
COL17A1-204ENST00000433822 SERPINA5P05154 406 aa6.44□□□□□ -1.38
COL17A1-204ENST00000433822 MMP7P09237 267 aaPredicted RBP6.44□□□□□ -1.38
COL17A1-204ENST00000433822 TPT1P13693 172 aaKnown RBP6.44□□□□□ -1.38
COL17A1-204ENST00000433822 FAHP16930 419 aa6.44□□□□□ -1.38
COL17A1-204ENST00000433822 ZNF32P17041 273 aa6.44□□□□□ -1.38
COL17A1-204ENST00000433822 TCN2P20062 427 aa6.44□□□□□ -1.38
COL17A1-204ENST00000433822 POU3F2P20265 443 aaPredicted RBP6.44□□□□□ -1.38
COL17A1-204ENST00000433822 CHATP28329 748 aa6.44□□□□□ -1.38
COL17A1-204ENST00000433822 DLSTP36957 453 aa6.44□□□□□ -1.38
COL17A1-204ENST00000433822 ATP1B3P54709 279 aa6.44□□□□□ -1.38
COL17A1-204ENST00000433822 SUPT4H1P63272 117 aaKnown RBP6.44□□□□□ -1.38
COL17A1-204ENST00000433822 TAGLNQ01995 201 aaKnown RBP6.44□□□□□ -1.38
COL17A1-204ENST00000433822 OC90Q02509 493 aaPredicted RBP6.44□□□□□ -1.38
COL17A1-204ENST00000433822 Q0VFX4 171 aa6.44□□□□□ -1.38
COL17A1-204ENST00000433822 SNAI3Q3KNW1 292 aa6.44□□□□□ -1.38
COL17A1-204ENST00000433822 FAM209AQ5JX71 171 aa6.44□□□□□ -1.38
COL17A1-204ENST00000433822 EIF5AL1Q6IS14 154 aaKnown RBP6.44□□□□□ -1.38
COL17A1-204ENST00000433822 CLEC18BQ6UXF7 455 aa6.44□□□□□ -1.38
COL17A1-204ENST00000433822 C17orf107Q6ZR85 190 aa6.44□□□□□ -1.38
COL17A1-204ENST00000433822 TMEM200AQ86VY9 491 aa6.44□□□□□ -1.38
COL17A1-204ENST00000433822 LRTM2Q8N967 370 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms