RNA–Protein interactions for RNA: ENST00000420973.5

CHRD-204, Transcript of chordin, humanhuman

TSL 1 (best)

Gene CHRD, Length 3,492 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-204ENST00000420973 TIMP4Q99727 224 aa12.79□□□□□ -0.36
CHRD-204ENST00000420973 HSF4Q9ULV5 492 aa12.79□□□□□ -0.36
CHRD-204ENST00000420973 IL18BPO95998 194 aa12.79□□□□□ -0.36
CHRD-204ENST00000420973 ACTBP60709 375 aa12.79□□□□□ -0.36
CHRD-204ENST00000420973 ACTG1P63261 375 aa12.79□□□□□ -0.36
CHRD-204ENST00000420973 PMS2P11Q13670 270 aa12.79□□□□□ -0.36
CHRD-204ENST00000420973 SLC16A14Q7RTX9 510 aa12.79□□□□□ -0.36
CHRD-204ENST00000420973 CMTM1Q8IZ96 169 aa12.79□□□□□ -0.36
CHRD-204ENST00000420973 SPACA5Q96QH8 159 aa12.79□□□□□ -0.36
CHRD-204ENST00000420973 COMMD4Q9H0A8 199 aa12.79□□□□□ -0.36
CHRD-204ENST00000420973 PPIAL4AQ9Y536 164 aa12.79□□□□□ -0.36
CHRD-204ENST00000420973 ZNF724A8MTY0 619 aa12.79□□□□□ -0.36
CHRD-204ENST00000420973 A8MVM7 634 aa12.79□□□□□ -0.36
CHRD-204ENST00000420973 OGG1O15527 345 aa12.79□□□□□ -0.36
CHRD-204ENST00000420973 SLC25A4P12235 298 aa12.79□□□□□ -0.36
CHRD-204ENST00000420973 ALDH3B1P43353 468 aa12.79□□□□□ -0.36
CHRD-204ENST00000420973 SLC6A8P48029 635 aa12.79□□□□□ -0.36
CHRD-204ENST00000420973 TAS2R43P59537 309 aa12.79□□□□□ -0.36
CHRD-204ENST00000420973 GCNT2Q8N0V5 402 aa12.79□□□□□ -0.36
CHRD-204ENST00000420973 FAM46BQ96A09 425 aa12.79□□□□□ -0.36
CHRD-204ENST00000420973 RNF2Q99496 336 aa12.79□□□□□ -0.36
CHRD-204ENST00000420973 MRPS18AQ9NVS2 196 aaKnown RBP12.79□□□□□ -0.36
CHRD-204ENST00000420973 EMC9Q9Y3B6 208 aa12.79□□□□□ -0.36
CHRD-204ENST00000420973 HDGFL3Q9Y3E1 203 aa12.79□□□□□ -0.36
CHRD-204ENST00000420973 TMEM131Q92545 1883 aa12.78□□□□□ -0.36
CHRD-204ENST00000420973 TSPAN2O60636 221 aa12.78□□□□□ -0.36
CHRD-204ENST00000420973 AMBPP02760 352 aa12.78□□□□□ -0.36
CHRD-204ENST00000420973 FCGR3AP08637 254 aa12.78□□□□□ -0.36
CHRD-204ENST00000420973 TACSTD2P09758 323 aa12.78□□□□□ -0.36
CHRD-204ENST00000420973 CAMLGP49069 296 aa12.78□□□□□ -0.36
CHRD-204ENST00000420973 SPOCK1Q08629 439 aa12.78□□□□□ -0.36
CHRD-204ENST00000420973 MRPL49Q13405 166 aaKnown RBP12.78□□□□□ -0.36
CHRD-204ENST00000420973 COL5A1-AS1Q5SY13 56 aa12.78□□□□□ -0.36
CHRD-204ENST00000420973 RPL7L1Q6DKI1 246 aaKnown RBP12.78□□□□□ -0.36
CHRD-204ENST00000420973 PLXDC2Q6UX71 529 aa12.78□□□□□ -0.36
CHRD-204ENST00000420973 GRINAQ7Z429 371 aa12.78□□□□□ -0.36
CHRD-204ENST00000420973 OR13C8Q8NGS7 320 aa12.78□□□□□ -0.36
CHRD-204ENST00000420973 SMIM19Q96E16 107 aa12.78□□□□□ -0.36
CHRD-204ENST00000420973 PGAM5Q96HS1 289 aa12.78□□□□□ -0.36
CHRD-204ENST00000420973 POTEKPQ9BYX7 375 aa12.78□□□□□ -0.36
CHRD-204ENST00000420973 ZNF430Q9H8G1 570 aaPredicted RBP12.78□□□□□ -0.36
CHRD-204ENST00000420973 PCNX1Q96RV3 2341 aa12.78□□□□□ -0.36
CHRD-204ENST00000420973 MUC6Q6W4X9 2439 aa12.78□□□□□ -0.36
CHRD-204ENST00000420973 CEP295Q9C0D2 2601 aa12.78□□□□□ -0.36
CHRD-204ENST00000420973 BLACEA4D250 179 aa12.78□□□□□ -0.36
CHRD-204ENST00000420973 CDC14BO60729 498 aa12.78□□□□□ -0.36
CHRD-204ENST00000420973 CSF1P09603 554 aa12.78□□□□□ -0.36
CHRD-204ENST00000420973 DCAF7P61962 342 aa12.78□□□□□ -0.36
CHRD-204ENST00000420973 STEAP1BQ6NZ63 245 aa12.78□□□□□ -0.36
CHRD-204ENST00000420973 OVCH1Q7RTY7 1134 aa12.78□□□□□ -0.36
CHRD-204ENST00000420973 ARV1Q9H2C2 271 aa12.78□□□□□ -0.36
CHRD-204ENST00000420973 PLEKHA1Q9HB21 404 aa12.78□□□□□ -0.36
CHRD-204ENST00000420973 HIF3AQ9Y2N7 669 aa12.78□□□□□ -0.36
CHRD-204ENST00000420973 VAMP5O95183 116 aa12.78□□□□□ -0.36
CHRD-204ENST00000420973 SRMP19623 302 aa12.78□□□□□ -0.36
CHRD-204ENST00000420973 BRS3P32247 399 aa12.78□□□□□ -0.36
CHRD-204ENST00000420973 SRYQ05066 204 aa12.78□□□□□ -0.36
CHRD-204ENST00000420973 C17orf67Q0P5P2 114 aa12.78□□□□□ -0.36
CHRD-204ENST00000420973 DRAM2Q6UX65 266 aa12.78□□□□□ -0.36
CHRD-204ENST00000420973 OR4S1Q8NGB4 309 aa12.78□□□□□ -0.36
CHRD-204ENST00000420973 SEPSECSQ9HD40 501 aaKnown RBP12.78□□□□□ -0.36
CHRD-204ENST00000420973 CGGBP1Q9UFW8 167 aaPredicted RBP12.78□□□□□ -0.36
CHRD-204ENST00000420973 MRM2Q9UI43 246 aaKnown RBP12.78□□□□□ -0.36
CHRD-204ENST00000420973 PITPNC1Q9UKF7 332 aa12.78□□□□□ -0.36
CHRD-204ENST00000420973 FOXJ3Q9UPW0 622 aa12.78□□□□□ -0.36
CHRD-204ENST00000420973 FLVCR1Q9Y5Y0 555 aa12.78□□□□□ -0.36
CHRD-204ENST00000420973 WNT11O96014 354 aa12.77□□□□□ -0.36
CHRD-204ENST00000420973 IGHV3-9P01782 118 aa12.77□□□□□ -0.36
CHRD-204ENST00000420973 DNASE1L1P49184 302 aa12.77□□□□□ -0.36
CHRD-204ENST00000420973 SOX8P57073 446 aa12.77□□□□□ -0.36
CHRD-204ENST00000420973 RPL19P84098 196 aaKnown RBP12.77□□□□□ -0.36
CHRD-204ENST00000420973 OR5L2Q8NGL0 311 aa12.77□□□□□ -0.36
CHRD-204ENST00000420973 FAM210BQ96KR6 192 aa12.77□□□□□ -0.36
CHRD-204ENST00000420973 CMKLR1Q99788 373 aa12.77□□□□□ -0.36
CHRD-204ENST00000420973 OR2J1Q9GZK6 312 aa12.77□□□□□ -0.36
CHRD-204ENST00000420973 PCED1AQ9H1Q7 454 aa12.77□□□□□ -0.36
CHRD-204ENST00000420973 GSX1Q9H4S2 264 aaPredicted RBP12.77□□□□□ -0.36
CHRD-204ENST00000420973 ZFP30Q9Y2G7 519 aa12.77□□□□□ -0.36
CHRD-204ENST00000420973 TMED3Q9Y3Q3 217 aa12.77□□□□□ -0.36
CHRD-204ENST00000420973 NSG1A0A0A6YYJ2 146 aa12.77□□□□□ -0.37
CHRD-204ENST00000420973 CD8AP01732 235 aa12.77□□□□□ -0.37
CHRD-204ENST00000420973 GALP22466 123 aa12.77□□□□□ -0.37
CHRD-204ENST00000420973 YRDCQ86U90 279 aaKnown RBP12.77□□□□□ -0.37
CHRD-204ENST00000420973 OR52N4Q8NGI2 321 aa12.77□□□□□ -0.37
CHRD-204ENST00000420973 PGLYRP3Q96LB9 341 aa12.77□□□□□ -0.37
CHRD-204ENST00000420973 PHB2Q99623 299 aa12.77□□□□□ -0.37
CHRD-204ENST00000420973 TAS2R8Q9NYW2 309 aa12.77□□□□□ -0.37
CHRD-204ENST00000420973 C19orf25Q9UFG5 118 aaPredicted RBP12.77□□□□□ -0.37
CHRD-204ENST00000420973 LRP4O75096 1905 aa12.77□□□□□ -0.37
CHRD-204ENST00000420973 CEP192Q8TEP8 1941 aa12.77□□□□□ -0.37
CHRD-204ENST00000420973 CCL25O15444 150 aa12.76□□□□□ -0.37
CHRD-204ENST00000420973 SLC2A5P22732 501 aa12.76□□□□□ -0.37
CHRD-204ENST00000420973 SLC6A9P48067 706 aa12.76□□□□□ -0.37
CHRD-204ENST00000420973 RPL27P61353 136 aaKnown RBP12.76□□□□□ -0.37
CHRD-204ENST00000420973 OR51D1Q8NGF3 324 aa12.76□□□□□ -0.37
CHRD-204ENST00000420973 RAB39BQ96DA2 213 aa12.76□□□□□ -0.37
CHRD-204ENST00000420973 CDC6Q99741 560 aa12.76□□□□□ -0.37
CHRD-204ENST00000420973 B9D1Q9UPM9 204 aa12.76□□□□□ -0.37
CHRD-204ENST00000420973 ZNF281Q9Y2X9 895 aa12.76□□□□□ -0.37
CHRD-204ENST00000420973 MED13Q9UHV7 2174 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 111.4 ms