RNA–Protein interactions for RNA: ENST00000414963.2

SF3B1-204, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 651 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-204ENST00000414963 FAM90A14PP0C7W9 464 aa12□□□□□ -0.49
SF3B1-204ENST00000414963 FAM90A24PP0C7X0 464 aa12□□□□□ -0.49
SF3B1-204ENST00000414963 SERPINA2P20848 420 aa12□□□□□ -0.49
SF3B1-204ENST00000414963 RAB12Q6IQ22 244 aa12□□□□□ -0.49
SF3B1-204ENST00000414963 GCSAMQ8N6F7 178 aa12□□□□□ -0.49
SF3B1-204ENST00000414963 LRRC29Q8WV35 223 aa12□□□□□ -0.49
SF3B1-204ENST00000414963 FAM46BQ96A09 425 aa12□□□□□ -0.49
SF3B1-204ENST00000414963 MARVELD3Q96A59 401 aa12□□□□□ -0.49
SF3B1-204ENST00000414963 ZNF488Q96MN9 340 aa12□□□□□ -0.49
SF3B1-204ENST00000414963 NPTNQ9Y639 398 aa12□□□□□ -0.49
SF3B1-204ENST00000414963 LRBAP50851 2863 aa12□□□□□ -0.49
SF3B1-204ENST00000414963 hCG_1807616A0A1W2PRN6 198 aa11.99□□□□□ -0.49
SF3B1-204ENST00000414963 FOXI3A8MTJ6 420 aaPredicted RBP11.99□□□□□ -0.49
SF3B1-204ENST00000414963 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.99□□□□□ -0.49
SF3B1-204ENST00000414963 RAB27BO00194 218 aa11.99□□□□□ -0.49
SF3B1-204ENST00000414963 NXPH2O95156 264 aa11.99□□□□□ -0.49
SF3B1-204ENST00000414963 FSTL3O95633 263 aa11.99□□□□□ -0.49
SF3B1-204ENST00000414963 F12P00748 615 aaPredicted RBP11.99□□□□□ -0.49
SF3B1-204ENST00000414963 IRF2P14316 349 aa11.99□□□□□ -0.49
SF3B1-204ENST00000414963 CPT2P23786 658 aa11.99□□□□□ -0.49
SF3B1-204ENST00000414963 RBM11P57052 281 aaKnown RBP11.99□□□□□ -0.49
SF3B1-204ENST00000414963 IL13RA2Q14627 380 aa11.99□□□□□ -0.49
SF3B1-204ENST00000414963 ZNF146Q15072 292 aa11.99□□□□□ -0.49
SF3B1-204ENST00000414963 CNIH2Q6PI25 160 aa11.99□□□□□ -0.49
SF3B1-204ENST00000414963 METAP1DQ6UB28 335 aaPredicted RBP11.99□□□□□ -0.49
SF3B1-204ENST00000414963 ACP7Q6ZNF0 438 aa11.99□□□□□ -0.49
SF3B1-204ENST00000414963 LINC00596Q86U02 117 aa11.99□□□□□ -0.49
SF3B1-204ENST00000414963 RDH5Q92781 318 aa11.99□□□□□ -0.49
SF3B1-204ENST00000414963 EMG1Q92979 244 aaKnown RBP11.99□□□□□ -0.49
SF3B1-204ENST00000414963 SELENOIQ9C0D9 397 aa11.99□□□□□ -0.49
SF3B1-204ENST00000414963 ATG5Q9H1Y0 275 aa11.99□□□□□ -0.49
SF3B1-204ENST00000414963 IFT22Q9H7X7 185 aa11.99□□□□□ -0.49
SF3B1-204ENST00000414963 DLL4Q9NR61 685 aa11.99□□□□□ -0.49
SF3B1-204ENST00000414963 TMEM106BQ9NUM4 274 aa11.99□□□□□ -0.49
SF3B1-204ENST00000414963 ZNF701Q9NV72 531 aaPredicted RBP11.99□□□□□ -0.49
SF3B1-204ENST00000414963 RABL2AQ9UBK7 228 aaPredicted RBP11.99□□□□□ -0.49
SF3B1-204ENST00000414963 RABL2BQ9UNT1 228 aa11.99□□□□□ -0.49
SF3B1-204ENST00000414963 ST3GAL6Q9Y274 331 aa11.99□□□□□ -0.49
SF3B1-204ENST00000414963 PLEKHA6Q9Y2H5 1048 aa11.99□□□□□ -0.49
SF3B1-204ENST00000414963 DOPEY2Q9Y3R5 2298 aa11.99□□□□□ -0.49
SF3B1-204ENST00000414963 A0A0A6YYD4 124 aa11.98□□□□□ -0.49
SF3B1-204ENST00000414963 FAM25AB3EWG3 89 aa11.98□□□□□ -0.49
SF3B1-204ENST00000414963 FAM25CB3EWG5 89 aa11.98□□□□□ -0.49
SF3B1-204ENST00000414963 FAM25GB3EWG6 89 aa11.98□□□□□ -0.49
SF3B1-204ENST00000414963 TMEM178BH3BS89 294 aa11.98□□□□□ -0.49
SF3B1-204ENST00000414963 H3BUI4 141 aa11.98□□□□□ -0.49
SF3B1-204ENST00000414963 WNT9BO14905 357 aa11.98□□□□□ -0.49
SF3B1-204ENST00000414963 XRCC3O43542 346 aa11.98□□□□□ -0.49
SF3B1-204ENST00000414963 RP2O75695 350 aa11.98□□□□□ -0.49
SF3B1-204ENST00000414963 KNG1P01042 644 aa11.98□□□□□ -0.49
SF3B1-204ENST00000414963 INHBBP09529 407 aa11.98□□□□□ -0.49
SF3B1-204ENST00000414963 PAX1P15863 534 aa11.98□□□□□ -0.49
SF3B1-204ENST00000414963 PRKACAP17612 351 aa11.98□□□□□ -0.49
SF3B1-204ENST00000414963 GLRA1P23415 457 aa11.98□□□□□ -0.49
SF3B1-204ENST00000414963 PTBP1P26599 531 aaKnown RBP eCLIP11.98□□□□□ -0.49
SF3B1-204ENST00000414963 TALDO1P37837 337 aa11.98□□□□□ -0.49
SF3B1-204ENST00000414963 MNDAP41218 407 aa11.98□□□□□ -0.49
SF3B1-204ENST00000414963 PITPNBP48739 271 aa11.98□□□□□ -0.49
SF3B1-204ENST00000414963 EFNA4P52798 201 aa11.98□□□□□ -0.49
SF3B1-204ENST00000414963 MPV17LQ2QL34 196 aa11.98□□□□□ -0.49
SF3B1-204ENST00000414963 HFEQ30201 348 aa11.98□□□□□ -0.49
SF3B1-204ENST00000414963 SMIM21Q3B7S5 101 aa11.98□□□□□ -0.49
SF3B1-204ENST00000414963 SPIN3Q5JUX0 258 aa11.98□□□□□ -0.49
SF3B1-204ENST00000414963 C1orf87Q8N0U7 546 aa11.98□□□□□ -0.49
SF3B1-204ENST00000414963 OR4M1Q8NGD0 313 aa11.98□□□□□ -0.49
SF3B1-204ENST00000414963 OR56B1Q8NGI3 324 aa11.98□□□□□ -0.49
SF3B1-204ENST00000414963 S100ZQ8WXG8 99 aa11.98□□□□□ -0.49
SF3B1-204ENST00000414963 DIRAS2Q96HU8 199 aa11.98□□□□□ -0.49
SF3B1-204ENST00000414963 CCL19Q99731 98 aa11.98□□□□□ -0.49
SF3B1-204ENST00000414963 GAL3ST1Q99999 423 aa11.98□□□□□ -0.49
SF3B1-204ENST00000414963 WDR13Q9H1Z4 485 aa11.98□□□□□ -0.49
SF3B1-204ENST00000414963 CXorf56Q9H5V9 222 aa11.98□□□□□ -0.49
SF3B1-204ENST00000414963 AKIP1Q9NQ31 210 aa11.98□□□□□ -0.49
SF3B1-204ENST00000414963 DIABLOQ9NR28 239 aa11.98□□□□□ -0.49
SF3B1-204ENST00000414963 CENPEQ02224 2701 aa11.97□□□□□ -0.49
SF3B1-204ENST00000414963 MUC1P15941 1255 aaPredicted RBP11.97□□□□□ -0.49
SF3B1-204ENST00000414963 EGR1P18146 543 aa11.97□□□□□ -0.49
SF3B1-204ENST00000414963 CDK2P24941 298 aa11.97□□□□□ -0.49
SF3B1-204ENST00000414963 COL8A2P25067 703 aa11.97□□□□□ -0.49
SF3B1-204ENST00000414963 CDKN1AP38936 164 aa11.97□□□□□ -0.49
SF3B1-204ENST00000414963 NR4A2P43354 598 aa11.97□□□□□ -0.49
SF3B1-204ENST00000414963 ZNF45Q02386 682 aa11.97□□□□□ -0.49
SF3B1-204ENST00000414963 PIGYQ3MUY2 71 aa11.97□□□□□ -0.49
SF3B1-204ENST00000414963 SPANXN2Q5MJ10 180 aa11.97□□□□□ -0.49
SF3B1-204ENST00000414963 TEX36Q5VZQ5 186 aa11.97□□□□□ -0.49
SF3B1-204ENST00000414963 ZNF787Q6DD87 383 aa11.97□□□□□ -0.49
SF3B1-204ENST00000414963 FIP1L1Q6UN15 594 aaKnown RBP11.97□□□□□ -0.49
SF3B1-204ENST00000414963 BAIAP2L2Q6UXY1 529 aa11.97□□□□□ -0.49
SF3B1-204ENST00000414963 TGIF2LYQ8IUE0 185 aa11.97□□□□□ -0.49
SF3B1-204ENST00000414963 MFSD4AQ8N468 514 aa11.97□□□□□ -0.49
SF3B1-204ENST00000414963 OR10R2Q8NGX6 335 aa11.97□□□□□ -0.49
SF3B1-204ENST00000414963 CCL17Q92583 94 aa11.97□□□□□ -0.49
SF3B1-204ENST00000414963 YIPF5Q969M3 257 aa11.97□□□□□ -0.49
SF3B1-204ENST00000414963 NICN1Q9BSH3 213 aa11.97□□□□□ -0.49
SF3B1-204ENST00000414963 EXTL2Q9UBQ6 330 aa11.97□□□□□ -0.49
SF3B1-204ENST00000414963 CACNG2Q9Y698 323 aa11.97□□□□□ -0.49
SF3B1-204ENST00000414963 CACNA1DQ01668 2161 aa11.96□□□□□ -0.49
SF3B1-204ENST00000414963 FABP12A6NFH5 140 aa11.96□□□□□ -0.49
SF3B1-204ENST00000414963 GEMIN2O14893 280 aaKnown RBP11.96□□□□□ -0.49
SF3B1-204ENST00000414963 SOCS1O15524 211 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 158.9 ms