RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 TMEM242Q9NWH2 141 aa4.58□□□□□ -1.68
HERC4-205ENST00000412272 MRPL16Q9NX20 251 aaKnown RBP4.58□□□□□ -1.68
HERC4-205ENST00000412272 ANKRD10Q9NXR5 420 aa4.58□□□□□ -1.68
HERC4-205ENST00000412272 TVP23BQ9NYZ1 205 aa4.58□□□□□ -1.68
HERC4-205ENST00000412272 CRLS1Q9UJA2 301 aa4.58□□□□□ -1.68
HERC4-205ENST00000412272 HSF4Q9ULV5 492 aa4.58□□□□□ -1.68
HERC4-205ENST00000412272 DAPP1Q9UN19 280 aa4.58□□□□□ -1.68
HERC4-205ENST00000412272 TTC3P53804 2025 aa4.58□□□□□ -1.68
HERC4-205ENST00000412272 NUP205Q92621 2012 aa4.58□□□□□ -1.68
HERC4-205ENST00000412272 DOCK4Q8N1I0 1966 aa4.58□□□□□ -1.68
HERC4-205ENST00000412272 GXYLT2A0PJZ3 443 aa4.58□□□□□ -1.68
HERC4-205ENST00000412272 DUX1O43812 170 aa4.58□□□□□ -1.68
HERC4-205ENST00000412272 CNMDO75829 334 aa4.58□□□□□ -1.68
HERC4-205ENST00000412272 CXCL8P10145 99 aa4.58□□□□□ -1.68
HERC4-205ENST00000412272 CSRP1P21291 193 aaKnown RBP4.58□□□□□ -1.68
HERC4-205ENST00000412272 AMTP48728 403 aa4.58□□□□□ -1.68
HERC4-205ENST00000412272 ADAM8P78325 824 aa4.58□□□□□ -1.68
HERC4-205ENST00000412272 PITX1P78337 314 aaPredicted RBP4.58□□□□□ -1.68
HERC4-205ENST00000412272 PDE7AQ13946 482 aa4.58□□□□□ -1.68
HERC4-205ENST00000412272 TNXAQ16473 311 aa4.58□□□□□ -1.68
HERC4-205ENST00000412272 SOHLH1Q5JUK2 328 aa4.58□□□□□ -1.68
HERC4-205ENST00000412272 C1QL3Q5VWW1 255 aa4.58□□□□□ -1.68
HERC4-205ENST00000412272 Q6ZNB5 142 aa4.58□□□□□ -1.68
HERC4-205ENST00000412272 CSNK1A1LQ8N752 337 aa4.58□□□□□ -1.68
HERC4-205ENST00000412272 OR4K17Q8NGC6 315 aa4.58□□□□□ -1.68
HERC4-205ENST00000412272 FNDC9Q8TBE3 224 aa4.58□□□□□ -1.68
HERC4-205ENST00000412272 TMEM170AQ8WVE7 144 aa4.58□□□□□ -1.68
HERC4-205ENST00000412272 DUX5Q96PT3 197 aa4.58□□□□□ -1.68
HERC4-205ENST00000412272 MACROD1Q9BQ69 325 aa4.58□□□□□ -1.68
HERC4-205ENST00000412272 NDFIP1Q9BT67 221 aa4.58□□□□□ -1.68
HERC4-205ENST00000412272 OR52D1Q9H346 318 aa4.58□□□□□ -1.68
HERC4-205ENST00000412272 TMEM9BQ9NQ34 198 aa4.58□□□□□ -1.68
HERC4-205ENST00000412272 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.58□□□□□ -1.68
HERC4-205ENST00000412272 FBLN5Q9UBX5 448 aa4.58□□□□□ -1.68
HERC4-205ENST00000412272 ICAM5Q9UMF0 924 aa4.58□□□□□ -1.68
HERC4-205ENST00000412272 SIRT4Q9Y6E7 314 aaPredicted RBP4.58□□□□□ -1.68
HERC4-205ENST00000412272 MYO16Q9Y6X6 1858 aa4.58□□□□□ -1.68
HERC4-205ENST00000412272 A0A0J9YY10 115 aa4.58□□□□□ -1.68
HERC4-205ENST00000412272 A0A1B0GX78 115 aa4.58□□□□□ -1.68
HERC4-205ENST00000412272 ZNF354AO60765 605 aaPredicted RBP4.58□□□□□ -1.68
HERC4-205ENST00000412272 ARL6IP5O75915 188 aa4.58□□□□□ -1.68
HERC4-205ENST00000412272 CT45A8P0DMV1 189 aa4.58□□□□□ -1.68
HERC4-205ENST00000412272 CT45A9P0DMV2 189 aa4.58□□□□□ -1.68
HERC4-205ENST00000412272 SMIM10L2AP0DMW4 78 aa4.58□□□□□ -1.68
HERC4-205ENST00000412272 SMIM10L2BP0DMW5 78 aa4.58□□□□□ -1.68
HERC4-205ENST00000412272 ACP5P13686 325 aa4.58□□□□□ -1.68
HERC4-205ENST00000412272 TACR1P25103 407 aa4.58□□□□□ -1.68
HERC4-205ENST00000412272 NTHL1P78549 312 aa4.58□□□□□ -1.68
HERC4-205ENST00000412272 DCAF4L1Q3SXM0 396 aa4.58□□□□□ -1.68
HERC4-205ENST00000412272 CT45A2Q5DJT8 189 aa4.58□□□□□ -1.68
HERC4-205ENST00000412272 ZNF429Q86V71 674 aa4.58□□□□□ -1.68
HERC4-205ENST00000412272 DTX1Q86Y01 620 aa4.58□□□□□ -1.68
HERC4-205ENST00000412272 PPP1R14AQ96A00 147 aa4.58□□□□□ -1.68
HERC4-205ENST00000412272 IMMP2LQ96T52 175 aa4.58□□□□□ -1.68
HERC4-205ENST00000412272 IL23AQ9NPF7 189 aa4.58□□□□□ -1.68
HERC4-205ENST00000412272 MRPS28Q9Y2Q9 187 aaKnown RBP4.58□□□□□ -1.68
HERC4-205ENST00000412272 ANAPC1Q9H1A4 1944 aa4.58□□□□□ -1.68
HERC4-205ENST00000412272 TNS1Q9HBL0 1735 aaKnown RBP4.58□□□□□ -1.68
HERC4-205ENST00000412272 TRAV8-7A0A075B6U6 113 aa4.57□□□□□ -1.68
HERC4-205ENST00000412272 TRAV8-6A0A0B4J262 113 aa4.57□□□□□ -1.68
HERC4-205ENST00000412272 TLCD2A6NGC4 264 aa4.57□□□□□ -1.68
HERC4-205ENST00000412272 DDTLA6NHG4 134 aaPredicted RBP4.57□□□□□ -1.68
HERC4-205ENST00000412272 NUPR1O60356 82 aa4.57□□□□□ -1.68
HERC4-205ENST00000412272 CGAP01215 116 aa4.57□□□□□ -1.68
HERC4-205ENST00000412272 SERPINA7P05543 415 aa4.57□□□□□ -1.68
HERC4-205ENST00000412272 MFAP4P55083 255 aa4.57□□□□□ -1.68
HERC4-205ENST00000412272 FZD2Q14332 565 aa4.57□□□□□ -1.68
HERC4-205ENST00000412272 PTPRNQ16849 979 aa4.57□□□□□ -1.68
HERC4-205ENST00000412272 MIDNQ504T8 468 aa4.57□□□□□ -1.68
HERC4-205ENST00000412272 TMEM128Q5BJH2 165 aa4.57□□□□□ -1.68
HERC4-205ENST00000412272 SLC25A53Q5H9E4 307 aa4.57□□□□□ -1.68
HERC4-205ENST00000412272 ARL9Q6T311 187 aa4.57□□□□□ -1.68
HERC4-205ENST00000412272 ACOT1Q86TX2 421 aa4.57□□□□□ -1.68
HERC4-205ENST00000412272 UMODL1-AS1Q8N2C9 162 aa4.57□□□□□ -1.68
HERC4-205ENST00000412272 MUC15Q8N387 334 aa4.57□□□□□ -1.68
HERC4-205ENST00000412272 OR8G5Q8NG78 346 aa4.57□□□□□ -1.68
HERC4-205ENST00000412272 SLAMF6Q96DU3 332 aa4.57□□□□□ -1.68
HERC4-205ENST00000412272 PYGO2Q9BRQ0 406 aa4.57□□□□□ -1.68
HERC4-205ENST00000412272 TIMM29Q9BSF4 260 aa4.57□□□□□ -1.68
HERC4-205ENST00000412272 TMUB1Q9BVT8 246 aa4.57□□□□□ -1.68
HERC4-205ENST00000412272 SLC25A18Q9H1K4 315 aa4.57□□□□□ -1.68
HERC4-205ENST00000412272 OR51I2Q9H344 312 aa4.57□□□□□ -1.68
HERC4-205ENST00000412272 PLK3Q9H4B4 646 aa4.57□□□□□ -1.68
HERC4-205ENST00000412272 ST6GALNAC2Q9UJ37 374 aa4.57□□□□□ -1.68
HERC4-205ENST00000412272 HSPB8Q9UJY1 196 aa4.57□□□□□ -1.68
HERC4-205ENST00000412272 BOKQ9UMX3 212 aaPredicted RBP4.57□□□□□ -1.68
HERC4-205ENST00000412272 THSD7AQ9UPZ6 1657 aa4.57□□□□□ -1.68
HERC4-205ENST00000412272 OR51F1A6NGY5 319 aa4.57□□□□□ -1.68
HERC4-205ENST00000412272 MSGN1A6NI15 193 aa4.57□□□□□ -1.68
HERC4-205ENST00000412272 SOX1O00570 391 aaPredicted RBP4.57□□□□□ -1.68
HERC4-205ENST00000412272 ZNF208O43345 1280 aa4.57□□□□□ -1.68
HERC4-205ENST00000412272 B3GALT4O96024 378 aa4.57□□□□□ -1.68
HERC4-205ENST00000412272 GAPDHP04406 335 aaKnown RBP4.57□□□□□ -1.68
HERC4-205ENST00000412272 CTSLP07711 333 aa4.57□□□□□ -1.68
HERC4-205ENST00000412272 EN2P19622 333 aaPredicted RBP4.57□□□□□ -1.68
HERC4-205ENST00000412272 UBE2NP61088 152 aaKnown RBP4.57□□□□□ -1.68
HERC4-205ENST00000412272 ZXDBP98169 803 aa4.57□□□□□ -1.68
HERC4-205ENST00000412272 LAMTOR4Q0VGL1 99 aa4.57□□□□□ -1.68
HERC4-205ENST00000412272 IHHQ14623 411 aa4.57□□□□□ -1.68
HERC4-205ENST00000412272 PRAMEF17Q5VTA0 474 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms