RNA–Protein interactions for RNA: ENST00000409627.6

SUMO1-208, Transcript of small ubiquitin-like modifier 1, human

TSL 3

Gene SUMO1, Length 722 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SUMO1-208	ENST00000409627	VBP1	P61758	197 aa		13.9	□□□□□ -0.18
SUMO1-208	ENST00000409627	NCS1	P62166	190 aa		13.9	□□□□□ -0.18
SUMO1-208	ENST00000409627	BLMH	Q13867	455 aa		13.9	□□□□□ -0.18
SUMO1-208	ENST00000409627	GPR176	Q14439	515 aa		13.9	□□□□□ -0.18
SUMO1-208	ENST00000409627	DGUOK	Q16854	277 aa		13.9	□□□□□ -0.18
SUMO1-208	ENST00000409627	FIP1L1	Q6UN15	594 aa	Known RBP	13.9	□□□□□ -0.18
SUMO1-208	ENST00000409627	DCDC5	Q6ZRR9	648 aa		13.9	□□□□□ -0.18
SUMO1-208	ENST00000409627	NR2C2AP	Q86WQ0	139 aa		13.9	□□□□□ -0.18
SUMO1-208	ENST00000409627	DEFB108B	Q8NET1	73 aa		13.9	□□□□□ -0.18
SUMO1-208	ENST00000409627	RAB2B	Q8WUD1	216 aa		13.9	□□□□□ -0.18
SUMO1-208	ENST00000409627	GAL3ST1	Q99999	423 aa		13.9	□□□□□ -0.18
SUMO1-208	ENST00000409627	REG4	Q9BYZ8	158 aa		13.9	□□□□□ -0.18
SUMO1-208	ENST00000409627	DNTTIP1	Q9H147	329 aa		13.9	□□□□□ -0.18
SUMO1-208	ENST00000409627	ELL3	Q9HB65	397 aa	Predicted RBP	13.9	□□□□□ -0.18
SUMO1-208	ENST00000409627	HMG20A	Q9NP66	347 aa		13.9	□□□□□ -0.18
SUMO1-208	ENST00000409627	PCDHB16	Q9NRJ7	776 aa		13.9	□□□□□ -0.18
SUMO1-208	ENST00000409627	CR1	P17927	2039 aa		13.9	□□□□□ -0.18
SUMO1-208	ENST00000409627	OR2AT4	A6NND4	320 aa		13.89	□□□□□ -0.19
SUMO1-208	ENST00000409627	CEACAM18	A8MTB9	384 aa		13.89	□□□□□ -0.19
SUMO1-208	ENST00000409627	NOTO	A8MTQ0	251 aa		13.89	□□□□□ -0.19
SUMO1-208	ENST00000409627	AIP	O00170	330 aa		13.89	□□□□□ -0.19
SUMO1-208	ENST00000409627	IL1A	P01583	271 aa		13.89	□□□□□ -0.19
SUMO1-208	ENST00000409627	PSG2	P11465	335 aa		13.89	□□□□□ -0.19
SUMO1-208	ENST00000409627	PRKACA	P17612	351 aa		13.89	□□□□□ -0.19
SUMO1-208	ENST00000409627	CPT2	P23786	658 aa		13.89	□□□□□ -0.19
SUMO1-208	ENST00000409627	MXD1	Q05195	221 aa		13.89	□□□□□ -0.19
SUMO1-208	ENST00000409627	LOXL1	Q08397	574 aa	Predicted RBP	13.89	□□□□□ -0.19
SUMO1-208	ENST00000409627	RAB11B	Q15907	218 aa		13.89	□□□□□ -0.19
SUMO1-208	ENST00000409627	SPIN3	Q5JUX0	258 aa		13.89	□□□□□ -0.19
SUMO1-208	ENST00000409627	ATPAF1	Q5TC12	328 aa	Predicted RBP	13.89	□□□□□ -0.19
SUMO1-208	ENST00000409627	OR10K1	Q8NGX5	313 aa		13.89	□□□□□ -0.19
SUMO1-208	ENST00000409627	CLDND2	Q8NHS1	167 aa		13.89	□□□□□ -0.19
SUMO1-208	ENST00000409627	ANGPTL6	Q8NI99	470 aa		13.89	□□□□□ -0.19
SUMO1-208	ENST00000409627	SLC25A28	Q96A46	364 aa		13.89	□□□□□ -0.19
SUMO1-208	ENST00000409627	NARFL	Q9H6Q4	476 aa		13.89	□□□□□ -0.19
SUMO1-208	ENST00000409627	SEBOX	Q9HB31	216 aa	Predicted RBP	13.89	□□□□□ -0.19
SUMO1-208	ENST00000409627	STEAP1	Q9UHE8	339 aa		13.89	□□□□□ -0.19
SUMO1-208	ENST00000409627	ZNF222	Q9UK12	451 aa		13.89	□□□□□ -0.19
SUMO1-208	ENST00000409627	AKAP9	Q99996	3911 aa		13.88	□□□□□ -0.19
SUMO1-208	ENST00000409627	IGKV1D-17	A0A075B6S4	117 aa		13.88	□□□□□ -0.19
SUMO1-208	ENST00000409627	SMIM30	A4D0T7	59 aa		13.88	□□□□□ -0.19
SUMO1-208	ENST00000409627	RNF223	E7ERA6	249 aa		13.88	□□□□□ -0.19
SUMO1-208	ENST00000409627		F5H0A9	414 aa	Predicted RBP	13.88	□□□□□ -0.19
SUMO1-208	ENST00000409627	HTR3B	O95264	441 aa		13.88	□□□□□ -0.19
SUMO1-208	ENST00000409627	BPNT1	O95861	308 aa		13.88	□□□□□ -0.19
SUMO1-208	ENST00000409627	IGHV2-5	P01817	119 aa		13.88	□□□□□ -0.19
SUMO1-208	ENST00000409627	GYPA	P02724	150 aa		13.88	□□□□□ -0.19
SUMO1-208	ENST00000409627	CSTB	P04080	98 aa	Known RBP	13.88	□□□□□ -0.19
SUMO1-208	ENST00000409627	CLEC2L	P0C7M8	214 aa		13.88	□□□□□ -0.19
SUMO1-208	ENST00000409627	SERPINA2	P20848	420 aa		13.88	□□□□□ -0.19
SUMO1-208	ENST00000409627	SERPINB10	P48595	397 aa		13.88	□□□□□ -0.19
SUMO1-208	ENST00000409627	CAPZA1	P52907	286 aa		13.88	□□□□□ -0.19
SUMO1-208	ENST00000409627	ZNF146	Q15072	292 aa		13.88	□□□□□ -0.19
SUMO1-208	ENST00000409627	SLC22A6	Q4U2R8	563 aa		13.88	□□□□□ -0.19
SUMO1-208	ENST00000409627	NHLRC3	Q5JS37	347 aa		13.88	□□□□□ -0.19
SUMO1-208	ENST00000409627	HES5	Q5TA89	166 aa		13.88	□□□□□ -0.19
SUMO1-208	ENST00000409627	SFXN4	Q6P4A7	337 aa		13.88	□□□□□ -0.19
SUMO1-208	ENST00000409627	SPNS3	Q6ZMD2	512 aa		13.88	□□□□□ -0.19
SUMO1-208	ENST00000409627	OR5T2	Q8NGG2	359 aa		13.88	□□□□□ -0.19
SUMO1-208	ENST00000409627	OR51T1	Q8NGJ9	327 aa		13.88	□□□□□ -0.19
SUMO1-208	ENST00000409627	MRPS24	Q96EL2	167 aa	Known RBP	13.88	□□□□□ -0.19
SUMO1-208	ENST00000409627	PATZ1	Q9HBE1	687 aa	Known RBP	13.88	□□□□□ -0.19
SUMO1-208	ENST00000409627	KAAG1	Q9UBP8	84 aa		13.88	□□□□□ -0.19
SUMO1-208	ENST00000409627	MIOX	Q9UGB7	285 aa		13.88	□□□□□ -0.19
SUMO1-208	ENST00000409627	PCDHB10	Q9UN67	800 aa		13.88	□□□□□ -0.19
SUMO1-208	ENST00000409627	CEPT1	Q9Y6K0	416 aa		13.88	□□□□□ -0.19
SUMO1-208	ENST00000409627	MYO9A	B2RTY4	2548 aa		13.88	□□□□□ -0.19
SUMO1-208	ENST00000409627	NKX6-3	A6NJ46	265 aa		13.87	□□□□□ -0.19
SUMO1-208	ENST00000409627	RFPL4A	A6NLU0	287 aa		13.87	□□□□□ -0.19
SUMO1-208	ENST00000409627	RFPL4AL1	F8VTS6	287 aa		13.87	□□□□□ -0.19
SUMO1-208	ENST00000409627	NOL3	O60936	208 aa	Known RBP	13.87	□□□□□ -0.19
SUMO1-208	ENST00000409627	TMEM127	O75204	238 aa		13.87	□□□□□ -0.19
SUMO1-208	ENST00000409627	GTF2F2	P13984	249 aa		13.87	□□□□□ -0.19
SUMO1-208	ENST00000409627	AMY2B	P19961	511 aa		13.87	□□□□□ -0.19
SUMO1-208	ENST00000409627	RPS19	P39019	145 aa	Known RBP	13.87	□□□□□ -0.19
SUMO1-208	ENST00000409627	CAV3	P56539	151 aa		13.87	□□□□□ -0.19
SUMO1-208	ENST00000409627	LMO4	P61968	165 aa		13.87	□□□□□ -0.19
SUMO1-208	ENST00000409627	IL13RA2	Q14627	380 aa		13.87	□□□□□ -0.19
SUMO1-208	ENST00000409627	ZNF788	Q6ZQV5	615 aa		13.87	□□□□□ -0.19
SUMO1-208	ENST00000409627	USP43	Q70EL4	1123 aa		13.87	□□□□□ -0.19
SUMO1-208	ENST00000409627	CROCCP3	Q8IVE0	287 aa		13.87	□□□□□ -0.19
SUMO1-208	ENST00000409627	OSR2	Q8N2R0	312 aa		13.87	□□□□□ -0.19
SUMO1-208	ENST00000409627	ISOC1	Q96CN7	298 aa		13.87	□□□□□ -0.19
SUMO1-208	ENST00000409627	RAB39B	Q96DA2	213 aa		13.87	□□□□□ -0.19
SUMO1-208	ENST00000409627	CST11	Q9H112	138 aa		13.87	□□□□□ -0.19
SUMO1-208	ENST00000409627	ZNF665	Q9H7R5	613 aa		13.87	□□□□□ -0.19
SUMO1-208	ENST00000409627	IL36RN	Q9UBH0	155 aa		13.87	□□□□□ -0.19
SUMO1-208	ENST00000409627	YLPM1	P49750	1951 aa	Known RBP	13.87	□□□□□ -0.19
SUMO1-208	ENST00000409627		A0A1W2PP11	408 aa		13.86	□□□□□ -0.19
SUMO1-208	ENST00000409627	ADAM20	O43506	726 aa		13.86	□□□□□ -0.19
SUMO1-208	ENST00000409627	HEXA	P06865	529 aa		13.86	□□□□□ -0.19
SUMO1-208	ENST00000409627	WNT2	P09544	360 aa		13.86	□□□□□ -0.19
SUMO1-208	ENST00000409627	VSIG8	P0DPA2	414 aa		13.86	□□□□□ -0.19
SUMO1-208	ENST00000409627	CALCB	P10092	127 aa		13.86	□□□□□ -0.19
SUMO1-208	ENST00000409627	ARSB	P15848	533 aa		13.86	□□□□□ -0.19
SUMO1-208	ENST00000409627	RPS2	P15880	293 aa	Known RBP	13.86	□□□□□ -0.19
SUMO1-208	ENST00000409627	PRDX2	P32119	198 aa		13.86	□□□□□ -0.19
SUMO1-208	ENST00000409627	CLDN12	P56749	244 aa		13.86	□□□□□ -0.19
SUMO1-208	ENST00000409627	QRFP	P83859	136 aa		13.86	□□□□□ -0.19
SUMO1-208	ENST00000409627	P2RY14	Q15391	338 aa		13.86	□□□□□ -0.19

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